RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 LRPPRCP42704 1394 aaKnown RBP15.8■□□□□ 0.12
ZNF540-210ENST00000592533 CHD1O14646 1710 aa15.8■□□□□ 0.12
ZNF540-210ENST00000592533 FBLN2P98095 1184 aa15.8■□□□□ 0.12
ZNF540-210ENST00000592533 TTC37Q6PGP7 1564 aa15.8■□□□□ 0.12
ZNF540-210ENST00000592533 PRAG1Q86YV5 1406 aa15.78■□□□□ 0.12
ZNF540-210ENST00000592533 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
ZNF540-210ENST00000592533 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
ZNF540-210ENST00000592533 PNISRQ8TF01 805 aaKnown RBP15.78■□□□□ 0.12
ZNF540-210ENST00000592533 CARD11Q9BXL7 1154 aa15.78■□□□□ 0.12
ZNF540-210ENST00000592533 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
ZNF540-210ENST00000592533 BRD4O60885 1362 aaPredicted RBP15.78■□□□□ 0.12
ZNF540-210ENST00000592533 EIF2AK4Q9P2K8 1649 aaKnown RBP15.78■□□□□ 0.12
ZNF540-210ENST00000592533 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.12
ZNF540-210ENST00000592533 PRDM15P57071 1507 aaPredicted RBP15.77■□□□□ 0.11
ZNF540-210ENST00000592533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.77■□□□□ 0.11
ZNF540-210ENST00000592533 MSH5O43196 834 aa15.76■□□□□ 0.11
ZNF540-210ENST00000592533 ATP10AO60312 1499 aa15.76■□□□□ 0.11
ZNF540-210ENST00000592533 ZNF326Q5BKZ1 582 aaKnown RBP15.76■□□□□ 0.11
ZNF540-210ENST00000592533 PLEKHH2Q8IVE3 1493 aa15.75■□□□□ 0.11
ZNF540-210ENST00000592533 HNRNPMP52272 730 aaKnown RBP eCLIP15.74■□□□□ 0.11
ZNF540-210ENST00000592533 RALBP1Q15311 655 aa15.74■□□□□ 0.11
ZNF540-210ENST00000592533 PLA2R1Q13018 1463 aa15.74■□□□□ 0.11
ZNF540-210ENST00000592533 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
ZNF540-210ENST00000592533 ZMYM4Q5VZL5 1548 aa15.74■□□□□ 0.11
ZNF540-210ENST00000592533 MYBBP1AQ9BQG0 1328 aaKnown RBP15.73■□□□□ 0.11
ZNF540-210ENST00000592533 CCDC144AA2RUR9 1427 aa15.73■□□□□ 0.11
ZNF540-210ENST00000592533 ABCC2Q92887 1545 aa15.73■□□□□ 0.11
ZNF540-210ENST00000592533 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
ZNF540-210ENST00000592533 DUOX2Q9NRD8 1548 aa15.72■□□□□ 0.11
ZNF540-210ENST00000592533 ST20-MTHFSA0A0A6YYL1 179 aa15.72■□□□□ 0.11
ZNF540-210ENST00000592533 A2MP01023 1474 aa15.72■□□□□ 0.11
ZNF540-210ENST00000592533 COL17A1Q9UMD9 1497 aaPredicted RBP15.72■□□□□ 0.11
ZNF540-210ENST00000592533 PARD3Q8TEW0 1356 aa15.71■□□□□ 0.11
ZNF540-210ENST00000592533 INSRP06213 1382 aa15.7■□□□□ 0.1
ZNF540-210ENST00000592533 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
ZNF540-210ENST00000592533 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
ZNF540-210ENST00000592533 ERBINQ96RT1 1412 aa15.69■□□□□ 0.1
ZNF540-210ENST00000592533 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
ZNF540-210ENST00000592533 WASHC2CQ9Y4E1 1318 aa15.66■□□□□ 0.1
ZNF540-210ENST00000592533 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
ZNF540-210ENST00000592533 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
ZNF540-210ENST00000592533 ABCC1P33527 1531 aa15.64■□□□□ 0.09
ZNF540-210ENST00000592533 IQGAP1P46940 1657 aa15.64■□□□□ 0.09
ZNF540-210ENST00000592533 ZCCHC11Q5TAX3 1644 aaKnown RBP15.64■□□□□ 0.09
ZNF540-210ENST00000592533 CEP152O94986 1710 aa15.63■□□□□ 0.09
ZNF540-210ENST00000592533 PER1O15534 1290 aaPredicted RBP15.63■□□□□ 0.09
ZNF540-210ENST00000592533 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
ZNF540-210ENST00000592533 SPHKAPQ2M3C7 1700 aa15.62■□□□□ 0.09
ZNF540-210ENST00000592533 UHRF1BP1LA0JNW5 1464 aa15.62■□□□□ 0.09
ZNF540-210ENST00000592533 ARAP3Q8WWN8 1544 aa15.62■□□□□ 0.09
ZNF540-210ENST00000592533 MADDQ8WXG6 1647 aa15.62■□□□□ 0.09
ZNF540-210ENST00000592533 ERCC6L2Q5T890 1561 aa15.61■□□□□ 0.09
ZNF540-210ENST00000592533 DEPDC5O75140 1603 aa15.61■□□□□ 0.09
ZNF540-210ENST00000592533 PLCH2O75038 1416 aa15.61■□□□□ 0.09
ZNF540-210ENST00000592533 BLMP54132 1417 aaPredicted RBP15.61■□□□□ 0.09
ZNF540-210ENST00000592533 TESK2Q96S53 571 aa15.6■□□□□ 0.09
ZNF540-210ENST00000592533 PDE3BQ13370 1112 aa15.6■□□□□ 0.09
ZNF540-210ENST00000592533 TRPM2O94759 1503 aa15.59■□□□□ 0.09
ZNF540-210ENST00000592533 DISP3Q9P2K9 1392 aa15.58■□□□□ 0.09
ZNF540-210ENST00000592533 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
ZNF540-210ENST00000592533 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.08
ZNF540-210ENST00000592533 NBPF1Q3BBV0 1214 aa15.57■□□□□ 0.08
ZNF540-210ENST00000592533 KIAA1210Q9ULL0 1709 aa15.57■□□□□ 0.08
ZNF540-210ENST00000592533 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
ZNF540-210ENST00000592533 RTEL1-TNFRSF6BF6WH68 1400 aa15.55■□□□□ 0.08
ZNF540-210ENST00000592533 TET3O43151 1660 aa15.55■□□□□ 0.08
ZNF540-210ENST00000592533 RRP1P56182 461 aaKnown RBP15.55■□□□□ 0.08
ZNF540-210ENST00000592533 ZFYVE16Q7Z3T8 1539 aa15.55■□□□□ 0.08
ZNF540-210ENST00000592533 SYNMO15061 1565 aa15.55■□□□□ 0.08
ZNF540-210ENST00000592533 CNGB1Q14028 1251 aaPredicted RBP15.54■□□□□ 0.08
ZNF540-210ENST00000592533 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
ZNF540-210ENST00000592533 VWDEQ8N2E2 1590 aa15.53■□□□□ 0.08
ZNF540-210ENST00000592533 PTPRTO14522 1441 aa15.53■□□□□ 0.08
ZNF540-210ENST00000592533 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
ZNF540-210ENST00000592533 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
ZNF540-210ENST00000592533 WDR7Q9Y4E6 1490 aa15.52■□□□□ 0.08
ZNF540-210ENST00000592533 MYOM1P52179 1685 aa15.52■□□□□ 0.07
ZNF540-210ENST00000592533 CLTCL1P53675 1640 aa15.52■□□□□ 0.07
ZNF540-210ENST00000592533 INO80Q9ULG1 1556 aaPredicted RBP15.51■□□□□ 0.07
ZNF540-210ENST00000592533 TMF1P82094 1093 aa15.51■□□□□ 0.07
ZNF540-210ENST00000592533 RGL3Q3MIN7 710 aa15.51■□□□□ 0.07
ZNF540-210ENST00000592533 STAC3Q96MF2 364 aa15.51■□□□□ 0.07
ZNF540-210ENST00000592533 RCAN3Q9UKA8 241 aa15.51■□□□□ 0.07
ZNF540-210ENST00000592533 TRAPPC8Q9Y2L5 1435 aa15.5■□□□□ 0.07
ZNF540-210ENST00000592533 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
ZNF540-210ENST00000592533 EFCAB2Q5VUJ9 269 aa15.49■□□□□ 0.07
ZNF540-210ENST00000592533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
ZNF540-210ENST00000592533 PANK3Q9H999 370 aa15.47■□□□□ 0.07
ZNF540-210ENST00000592533 SCAF11Q99590 1463 aaKnown RBP15.47■□□□□ 0.07
ZNF540-210ENST00000592533 IFT172Q9UG01 1749 aa15.47■□□□□ 0.07
ZNF540-210ENST00000592533 NOP58Q9Y2X3 529 aaKnown RBP15.47■□□□□ 0.07
ZNF540-210ENST00000592533 KDM5AP29375 1690 aaKnown RBP15.45■□□□□ 0.06
ZNF540-210ENST00000592533 NPC1L1Q9UHC9 1359 aa15.44■□□□□ 0.06
ZNF540-210ENST00000592533 ATP7AQ04656 1500 aa15.44■□□□□ 0.06
ZNF540-210ENST00000592533 MROH1Q8NDA8 1641 aa15.44■□□□□ 0.06
ZNF540-210ENST00000592533 ASXL1Q8IXJ9 1541 aa15.43■□□□□ 0.06
ZNF540-210ENST00000592533 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
ZNF540-210ENST00000592533 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
ZNF540-210ENST00000592533 PIK3C2GO75747 1445 aa15.42■□□□□ 0.06
ZNF540-210ENST00000592533 MYOM2P54296 1465 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms