RNA–Protein interactions for RNA: ENST00000591789.1

RTN2-211, Transcript of reticulon 2, humanhuman

TSL 3

Gene RTN2, Length 682 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-211ENST00000591789 PLXNC1O60486 1568 aa18.73■□□□□ 0.59
RTN2-211ENST00000591789 CEBPAP49715 358 aaPredicted RBP18.73■□□□□ 0.59
RTN2-211ENST00000591789 KDM5CP41229 1560 aa18.72■□□□□ 0.59
RTN2-211ENST00000591789 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
RTN2-211ENST00000591789 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
RTN2-211ENST00000591789 INO80Q9ULG1 1556 aaPredicted RBP18.71■□□□□ 0.59
RTN2-211ENST00000591789 KIF15Q9NS87 1388 aa18.7■□□□□ 0.58
RTN2-211ENST00000591789 MLH3Q9UHC1 1453 aa18.7■□□□□ 0.58
RTN2-211ENST00000591789 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
RTN2-211ENST00000591789 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
RTN2-211ENST00000591789 PTPRTO14522 1441 aa18.67■□□□□ 0.58
RTN2-211ENST00000591789 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
RTN2-211ENST00000591789 DUOX2Q9NRD8 1548 aa18.66■□□□□ 0.58
RTN2-211ENST00000591789 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
RTN2-211ENST00000591789 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
RTN2-211ENST00000591789 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
RTN2-211ENST00000591789 ATP10AO60312 1499 aa18.63■□□□□ 0.57
RTN2-211ENST00000591789 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
RTN2-211ENST00000591789 KIDINS220Q9ULH0 1771 aa18.63■□□□□ 0.57
RTN2-211ENST00000591789 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
RTN2-211ENST00000591789 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
RTN2-211ENST00000591789 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
RTN2-211ENST00000591789 CLSPNQ9HAW4 1339 aa18.58■□□□□ 0.57
RTN2-211ENST00000591789 UBAP1LF5GYI3 381 aa18.58■□□□□ 0.56
RTN2-211ENST00000591789 SETD1BQ9UPS6 1966 aaKnown RBP18.56■□□□□ 0.56
RTN2-211ENST00000591789 A2MP01023 1474 aa18.56■□□□□ 0.56
RTN2-211ENST00000591789 ABCA6Q8N139 1617 aa18.55■□□□□ 0.56
RTN2-211ENST00000591789 EIF2AK4Q9P2K8 1649 aaKnown RBP18.54■□□□□ 0.56
RTN2-211ENST00000591789 ESF1Q9H501 851 aaKnown RBP18.54■□□□□ 0.56
RTN2-211ENST00000591789 DIP2CQ9Y2E4 1556 aa18.54■□□□□ 0.56
RTN2-211ENST00000591789 KDM5DQ9BY66 1539 aa18.54■□□□□ 0.56
RTN2-211ENST00000591789 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
RTN2-211ENST00000591789 UNC13BO14795 1591 aa18.52■□□□□ 0.56
RTN2-211ENST00000591789 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
RTN2-211ENST00000591789 NUP155O75694 1391 aa18.49■□□□□ 0.55
RTN2-211ENST00000591789 PZPP20742 1482 aa18.49■□□□□ 0.55
RTN2-211ENST00000591789 C3P01024 1663 aa18.49■□□□□ 0.55
RTN2-211ENST00000591789 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
RTN2-211ENST00000591789 DEPDC5O75140 1603 aa18.48■□□□□ 0.55
RTN2-211ENST00000591789 ZNF335Q9H4Z2 1342 aaPredicted RBP18.47■□□□□ 0.55
RTN2-211ENST00000591789 KIF3BO15066 747 aa18.46■□□□□ 0.55
RTN2-211ENST00000591789 MED1Q15648 1581 aaPredicted RBP18.46■□□□□ 0.55
RTN2-211ENST00000591789 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
RTN2-211ENST00000591789 SLC4A1APQ9BWU0 796 aaKnown RBP18.45■□□□□ 0.54
RTN2-211ENST00000591789 RNF17Q9BXT8 1623 aaKnown RBP18.45■□□□□ 0.54
RTN2-211ENST00000591789 AGLP35573 1532 aa18.44■□□□□ 0.54
RTN2-211ENST00000591789 CAMSAP1Q5T5Y3 1602 aa18.44■□□□□ 0.54
RTN2-211ENST00000591789 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
RTN2-211ENST00000591789 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
RTN2-211ENST00000591789 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
RTN2-211ENST00000591789 KANK1Q14678 1352 aa18.42■□□□□ 0.54
RTN2-211ENST00000591789 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
RTN2-211ENST00000591789 VWDEQ8N2E2 1590 aa18.42■□□□□ 0.54
RTN2-211ENST00000591789 MROH1Q8NDA8 1641 aa18.41■□□□□ 0.54
RTN2-211ENST00000591789 HSPA1LP34931 641 aa18.4■□□□□ 0.54
RTN2-211ENST00000591789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
RTN2-211ENST00000591789 NCKAP5LQ9HCH0 1330 aa18.4■□□□□ 0.54
RTN2-211ENST00000591789 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
RTN2-211ENST00000591789 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
RTN2-211ENST00000591789 PKD2Q13563 968 aa18.37■□□□□ 0.53
RTN2-211ENST00000591789 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
RTN2-211ENST00000591789 ANKRD30BQ9BXX2 1392 aa18.36■□□□□ 0.53
RTN2-211ENST00000591789 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
RTN2-211ENST00000591789 GGT6Q6P531 493 aa18.33■□□□□ 0.52
RTN2-211ENST00000591789 TET3O43151 1660 aa18.33■□□□□ 0.52
RTN2-211ENST00000591789 NPATQ14207 1427 aa18.32■□□□□ 0.52
RTN2-211ENST00000591789 TOM1O60784 492 aa18.32■□□□□ 0.52
RTN2-211ENST00000591789 ABCC3O15438 1527 aa18.31■□□□□ 0.52
RTN2-211ENST00000591789 ZC3H13Q5T200 1668 aaKnown RBP18.31■□□□□ 0.52
RTN2-211ENST00000591789 FOXD1Q16676 465 aa18.3■□□□□ 0.52
RTN2-211ENST00000591789 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
RTN2-211ENST00000591789 EFCAB6Q5THR3 1501 aa18.29■□□□□ 0.52
RTN2-211ENST00000591789 WASHC2CQ9Y4E1 1318 aa18.29■□□□□ 0.52
RTN2-211ENST00000591789 PLA2R1Q13018 1463 aa18.29■□□□□ 0.52
RTN2-211ENST00000591789 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
RTN2-211ENST00000591789 RPRD2Q5VT52 1461 aaKnown RBP18.28■□□□□ 0.52
RTN2-211ENST00000591789 ZMYM3Q14202 1370 aa18.27■□□□□ 0.51
RTN2-211ENST00000591789 ARHGAP31Q2M1Z3 1444 aa18.26■□□□□ 0.51
RTN2-211ENST00000591789 MROH2AA6NES4 1674 aa18.26■□□□□ 0.51
RTN2-211ENST00000591789 E9PCH4 1651 aa18.26■□□□□ 0.51
RTN2-211ENST00000591789 CEP152O94986 1710 aa18.25■□□□□ 0.51
RTN2-211ENST00000591789 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
RTN2-211ENST00000591789 ZNF142P52746 1687 aaPredicted RBP18.23■□□□□ 0.51
RTN2-211ENST00000591789 CEP170BQ9Y4F5 1589 aaPredicted RBP18.23■□□□□ 0.51
RTN2-211ENST00000591789 NEUROD1Q13562 356 aa18.23■□□□□ 0.51
RTN2-211ENST00000591789 TRPM2O94759 1503 aa18.21■□□□□ 0.51
RTN2-211ENST00000591789 CPS1P31327 1500 aa18.2■□□□□ 0.5
RTN2-211ENST00000591789 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
RTN2-211ENST00000591789 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
RTN2-211ENST00000591789 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
RTN2-211ENST00000591789 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
RTN2-211ENST00000591789 NOS1P29475 1434 aa18.17■□□□□ 0.5
RTN2-211ENST00000591789 CLTCQ00610 1675 aaKnown RBP18.17■□□□□ 0.5
RTN2-211ENST00000591789 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
RTN2-211ENST00000591789 NEURL4Q96JN8 1562 aa18.12■□□□□ 0.49
RTN2-211ENST00000591789 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
RTN2-211ENST00000591789 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
RTN2-211ENST00000591789 ERVK-7P63135 1459 aa18.1■□□□□ 0.49
RTN2-211ENST00000591789 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
RTN2-211ENST00000591789 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms