RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 DENND4BO75064 1496 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-224ENST00000591764 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
DNMT1-224ENST00000591764 MADDQ8WXG6 1647 aa13.74□□□□□ -0.21
DNMT1-224ENST00000591764 GSE1Q14687 1217 aa13.73□□□□□ -0.21
DNMT1-224ENST00000591764 EFCAB5A4FU69 1503 aa13.73□□□□□ -0.21
DNMT1-224ENST00000591764 FANCAO15360 1455 aa13.73□□□□□ -0.21
DNMT1-224ENST00000591764 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
DNMT1-224ENST00000591764 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
DNMT1-224ENST00000591764 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
DNMT1-224ENST00000591764 SEC24BO95487 1268 aa13.71□□□□□ -0.21
DNMT1-224ENST00000591764 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-224ENST00000591764 RIMS1Q86UR5 1692 aaKnown RBP13.7□□□□□ -0.22
DNMT1-224ENST00000591764 IER5LQ5T953 404 aa13.7□□□□□ -0.22
DNMT1-224ENST00000591764 ZMYM4Q5VZL5 1548 aa13.69□□□□□ -0.22
DNMT1-224ENST00000591764 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
DNMT1-224ENST00000591764 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
DNMT1-224ENST00000591764 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
DNMT1-224ENST00000591764 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
DNMT1-224ENST00000591764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.68□□□□□ -0.22
DNMT1-224ENST00000591764 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
DNMT1-224ENST00000591764 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
DNMT1-224ENST00000591764 SCUBE2Q9NQ36 999 aa13.64□□□□□ -0.23
DNMT1-224ENST00000591764 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
DNMT1-224ENST00000591764 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-224ENST00000591764 CDK11AQ9UQ88 783 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-224ENST00000591764 FMN1Q68DA7 1419 aa13.62□□□□□ -0.23
DNMT1-224ENST00000591764 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
DNMT1-224ENST00000591764 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
DNMT1-224ENST00000591764 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
DNMT1-224ENST00000591764 PLCH2O75038 1416 aa13.6□□□□□ -0.23
DNMT1-224ENST00000591764 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
DNMT1-224ENST00000591764 MYO5CQ9NQX4 1742 aa13.6□□□□□ -0.23
DNMT1-224ENST00000591764 YEATS2Q9ULM3 1422 aa13.6□□□□□ -0.23
DNMT1-224ENST00000591764 CIZ1Q9ULV3 898 aaPredicted RBP13.6□□□□□ -0.23
DNMT1-224ENST00000591764 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
DNMT1-224ENST00000591764 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-224ENST00000591764 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
DNMT1-224ENST00000591764 ATP10AO60312 1499 aa13.58□□□□□ -0.24
DNMT1-224ENST00000591764 KIF14Q15058 1648 aa13.57□□□□□ -0.24
DNMT1-224ENST00000591764 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
DNMT1-224ENST00000591764 PLCG2P16885 1265 aa13.57□□□□□ -0.24
DNMT1-224ENST00000591764 HSPA2P54652 639 aa13.57□□□□□ -0.24
DNMT1-224ENST00000591764 MLECQ14165 292 aa13.57□□□□□ -0.24
DNMT1-224ENST00000591764 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-224ENST00000591764 CLIP1P30622 1438 aa13.56□□□□□ -0.24
DNMT1-224ENST00000591764 PREX1Q8TCU6 1659 aa13.56□□□□□ -0.24
DNMT1-224ENST00000591764 ARHGEF12Q9NZN5 1544 aa13.55□□□□□ -0.24
DNMT1-224ENST00000591764 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
DNMT1-224ENST00000591764 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
DNMT1-224ENST00000591764 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
DNMT1-224ENST00000591764 LCE2DQ5TA82 110 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-224ENST00000591764 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
DNMT1-224ENST00000591764 PSEN1P49768 467 aa13.52□□□□□ -0.25
DNMT1-224ENST00000591764 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
DNMT1-224ENST00000591764 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.25
DNMT1-224ENST00000591764 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
DNMT1-224ENST00000591764 KDM5CP41229 1560 aa13.5□□□□□ -0.25
DNMT1-224ENST00000591764 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
DNMT1-224ENST00000591764 POTEMA6NI47 508 aa13.5□□□□□ -0.25
DNMT1-224ENST00000591764 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
DNMT1-224ENST00000591764 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
DNMT1-224ENST00000591764 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
DNMT1-224ENST00000591764 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
DNMT1-224ENST00000591764 REREQ9P2R6 1566 aa13.48□□□□□ -0.25
DNMT1-224ENST00000591764 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
DNMT1-224ENST00000591764 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
DNMT1-224ENST00000591764 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
DNMT1-224ENST00000591764 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
DNMT1-224ENST00000591764 MLH3Q9UHC1 1453 aa13.44□□□□□ -0.26
DNMT1-224ENST00000591764 PREX2Q70Z35 1606 aa13.44□□□□□ -0.26
DNMT1-224ENST00000591764 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
DNMT1-224ENST00000591764 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
DNMT1-224ENST00000591764 CEBPAP49715 358 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-224ENST00000591764 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
DNMT1-224ENST00000591764 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
DNMT1-224ENST00000591764 ABCC1P33527 1531 aa13.43□□□□□ -0.26
DNMT1-224ENST00000591764 AGLP35573 1532 aa13.43□□□□□ -0.26
DNMT1-224ENST00000591764 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
DNMT1-224ENST00000591764 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
DNMT1-224ENST00000591764 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
DNMT1-224ENST00000591764 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
DNMT1-224ENST00000591764 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
DNMT1-224ENST00000591764 C3P01024 1663 aa13.4□□□□□ -0.26
DNMT1-224ENST00000591764 ITSN2Q9NZM3 1697 aa13.4□□□□□ -0.26
DNMT1-224ENST00000591764 PTPRTO14522 1441 aa13.39□□□□□ -0.27
DNMT1-224ENST00000591764 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
DNMT1-224ENST00000591764 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
DNMT1-224ENST00000591764 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
DNMT1-224ENST00000591764 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
DNMT1-224ENST00000591764 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
DNMT1-224ENST00000591764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
DNMT1-224ENST00000591764 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
DNMT1-224ENST00000591764 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
DNMT1-224ENST00000591764 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
DNMT1-224ENST00000591764 KIDINS220Q9ULH0 1771 aa13.35□□□□□ -0.27
DNMT1-224ENST00000591764 MROH2AA6NES4 1674 aa13.35□□□□□ -0.27
DNMT1-224ENST00000591764 NPATQ14207 1427 aa13.35□□□□□ -0.27
DNMT1-224ENST00000591764 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
DNMT1-224ENST00000591764 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
DNMT1-224ENST00000591764 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms