RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
SEH1L-208ENST00000590843 CUX1P39880 1505 aa14.76□□□□□ -0.05
SEH1L-208ENST00000590843 CADPS2Q86UW7 1296 aa14.76□□□□□ -0.05
SEH1L-208ENST00000590843 STK31Q9BXU1 1019 aa14.75□□□□□ -0.05
SEH1L-208ENST00000590843 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
SEH1L-208ENST00000590843 ISY1Q9ULR0 285 aaKnown RBP14.74□□□□□ -0.05
SEH1L-208ENST00000590843 MIA2Q96PC5 1412 aa14.74□□□□□ -0.05
SEH1L-208ENST00000590843 MSH6P52701 1360 aa14.74□□□□□ -0.05
SEH1L-208ENST00000590843 NLRP2Q9NX02 1062 aa14.74□□□□□ -0.05
SEH1L-208ENST00000590843 EFCAB5A4FU69 1503 aa14.74□□□□□ -0.05
SEH1L-208ENST00000590843 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
SEH1L-208ENST00000590843 TEFQ10587 303 aa14.73□□□□□ -0.05
SEH1L-208ENST00000590843 PRDM11Q9NQV5 511 aa14.73□□□□□ -0.05
SEH1L-208ENST00000590843 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
SEH1L-208ENST00000590843 NLRP13Q86W25 1043 aa14.73□□□□□ -0.05
SEH1L-208ENST00000590843 CASC1Q6TDU7 716 aa14.72□□□□□ -0.05
SEH1L-208ENST00000590843 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
SEH1L-208ENST00000590843 HSP90AA1P07900 732 aaKnown RBP14.72□□□□□ -0.05
SEH1L-208ENST00000590843 MINK1Q8N4C8 1332 aaPredicted RBP14.72□□□□□ -0.05
SEH1L-208ENST00000590843 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
SEH1L-208ENST00000590843 FANCAO15360 1455 aa14.71□□□□□ -0.05
SEH1L-208ENST00000590843 NBPF8Q3BBV2 869 aa14.71□□□□□ -0.05
SEH1L-208ENST00000590843 NBPF14Q5TI25 921 aa14.71□□□□□ -0.05
SEH1L-208ENST00000590843 ADGRL1O94910 1474 aa14.71□□□□□ -0.05
SEH1L-208ENST00000590843 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
SEH1L-208ENST00000590843 RPGRIP1LQ68CZ1 1315 aa14.7□□□□□ -0.06
SEH1L-208ENST00000590843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEH1L-208ENST00000590843 CWC22Q9HCG8 908 aaKnown RBP14.7□□□□□ -0.06
SEH1L-208ENST00000590843 LMTK3Q96Q04 1460 aa14.69□□□□□ -0.06
SEH1L-208ENST00000590843 STRN4Q9NRL3 753 aa14.69□□□□□ -0.06
SEH1L-208ENST00000590843 SMG6Q86US8 1419 aaKnown RBP14.69□□□□□ -0.06
SEH1L-208ENST00000590843 WDHD1O75717 1129 aaPredicted RBP14.68□□□□□ -0.06
SEH1L-208ENST00000590843 DDX10Q13206 875 aaKnown RBP14.68□□□□□ -0.06
SEH1L-208ENST00000590843 IQGAP2Q13576 1575 aa14.68□□□□□ -0.06
SEH1L-208ENST00000590843 GORABQ5T7V8 394 aa14.67□□□□□ -0.06
SEH1L-208ENST00000590843 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
SEH1L-208ENST00000590843 NEUROD2Q15784 382 aa14.67□□□□□ -0.06
SEH1L-208ENST00000590843 RRBP1Q9P2E9 1410 aaKnown RBP14.67□□□□□ -0.06
SEH1L-208ENST00000590843 FYCO1Q9BQS8 1478 aa14.67□□□□□ -0.06
SEH1L-208ENST00000590843 NOL10Q9BSC4 688 aaKnown RBP14.67□□□□□ -0.06
SEH1L-208ENST00000590843 CASKIN1Q8WXD9 1431 aa14.66□□□□□ -0.06
SEH1L-208ENST00000590843 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
SEH1L-208ENST00000590843 ROCK1Q13464 1354 aa14.66□□□□□ -0.06
SEH1L-208ENST00000590843 NLRP6P59044 892 aa14.66□□□□□ -0.06
SEH1L-208ENST00000590843 FAM135AQ9P2D6 1515 aa14.66□□□□□ -0.06
SEH1L-208ENST00000590843 TOM1L2Q6ZVM7 507 aa14.66□□□□□ -0.06
SEH1L-208ENST00000590843 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
SEH1L-208ENST00000590843 ABTB2Q8N961 1025 aa14.65□□□□□ -0.06
SEH1L-208ENST00000590843 HECW1Q76N89 1606 aa14.64□□□□□ -0.07
SEH1L-208ENST00000590843 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
SEH1L-208ENST00000590843 UHRF1BP1Q6BDS2 1440 aa14.64□□□□□ -0.07
SEH1L-208ENST00000590843 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
SEH1L-208ENST00000590843 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.074e-9■■■□□ 14.9
SEH1L-208ENST00000590843 CGNL1Q0VF96 1302 aa14.64□□□□□ -0.07
SEH1L-208ENST00000590843 CUL7Q14999 1698 aa14.64□□□□□ -0.07
SEH1L-208ENST00000590843 RBM33Q96EV2 1170 aaKnown RBP14.63□□□□□ -0.07
SEH1L-208ENST00000590843 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
SEH1L-208ENST00000590843 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
SEH1L-208ENST00000590843 ASXL2Q76L83 1435 aa14.63□□□□□ -0.07
SEH1L-208ENST00000590843 CTDP1Q9Y5B0 961 aaPredicted RBP14.62□□□□□ -0.07
SEH1L-208ENST00000590843 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
SEH1L-208ENST00000590843 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
SEH1L-208ENST00000590843 TNRQ92752 1358 aa14.61□□□□□ -0.07
SEH1L-208ENST00000590843 HNRNPUQ00839 825 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEH1L-208ENST00000590843 KIF21BO75037 1637 aa14.61□□□□□ -0.07
SEH1L-208ENST00000590843 USP35Q9P2H5 1018 aa14.61□□□□□ -0.07
SEH1L-208ENST00000590843 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
SEH1L-208ENST00000590843 ANKRD50Q9ULJ7 1429 aa14.61□□□□□ -0.07
SEH1L-208ENST00000590843 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
SEH1L-208ENST00000590843 IPO8O15397 1037 aaKnown RBP14.6□□□□□ -0.07
SEH1L-208ENST00000590843 HSP90AB1P08238 724 aaKnown RBP14.6□□□□□ -0.07
SEH1L-208ENST00000590843 CHMP3Q9Y3E7 222 aa14.6□□□□□ -0.07
SEH1L-208ENST00000590843 WWC1Q8IX03 1113 aa14.6□□□□□ -0.07
SEH1L-208ENST00000590843 CENPJQ9HC77 1338 aaPredicted RBP14.6□□□□□ -0.07
SEH1L-208ENST00000590843 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
SEH1L-208ENST00000590843 NEXNQ0ZGT2 675 aa14.59□□□□□ -0.07
SEH1L-208ENST00000590843 AMOTL1Q8IY63 956 aa14.59□□□□□ -0.07
SEH1L-208ENST00000590843 DDRGK1Q96HY6 314 aa14.59□□□□□ -0.07
SEH1L-208ENST00000590843 KCNJ4P48050 445 aa14.59□□□□□ -0.07
SEH1L-208ENST00000590843 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
SEH1L-208ENST00000590843 ADAMTS2O95450 1211 aa14.59□□□□□ -0.07
SEH1L-208ENST00000590843 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.08
SEH1L-208ENST00000590843 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
SEH1L-208ENST00000590843 KCNH5Q8NCM2 988 aa14.58□□□□□ -0.08
SEH1L-208ENST00000590843 DDX58O95786 925 aaKnown RBP14.57□□□□□ -0.08
SEH1L-208ENST00000590843 FGD1P98174 961 aa14.57□□□□□ -0.08
SEH1L-208ENST00000590843 C16orf71Q8IYS4 520 aaPredicted RBP14.57□□□□□ -0.08
SEH1L-208ENST00000590843 PLEKHO1Q53GL0 409 aaPredicted RBP14.56□□□□□ -0.08
SEH1L-208ENST00000590843 SPG7Q9UQ90 795 aa14.56□□□□□ -0.08
SEH1L-208ENST00000590843 POLD1P28340 1107 aa14.56□□□□□ -0.08
SEH1L-208ENST00000590843 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
SEH1L-208ENST00000590843 CFAP44Q96MT7 982 aa14.55□□□□□ -0.08
SEH1L-208ENST00000590843 C11orf95C9JLR9 678 aaPredicted RBP14.54□□□□□ -0.08
SEH1L-208ENST00000590843 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
SEH1L-208ENST00000590843 SMC4Q9NTJ3 1288 aa14.54□□□□□ -0.08
SEH1L-208ENST00000590843 WDR62O43379 1518 aa14.54□□□□□ -0.08
SEH1L-208ENST00000590843 GPATCH3Q96I76 525 aa14.54□□□□□ -0.08
SEH1L-208ENST00000590843 WDR7Q9Y4E6 1490 aa14.53□□□□□ -0.08
SEH1L-208ENST00000590843 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
SEH1L-208ENST00000590843 HFM1A2PYH4 1435 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms