RNA–Protein interactions for RNA: ENST00000590671.5

NCLN-205, Transcript of nicalin, humanhuman

TSL 2 BASIC

Gene NCLN, Length 2,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-205ENST00000590671 DDX10Q13206 875 aaKnown RBP28.52■■■□□ 2.16
NCLN-205ENST00000590671 DHX29Q7Z478 1369 aaKnown RBP28.52■■■□□ 2.16
NCLN-205ENST00000590671 KDM5CP41229 1560 aa28.51■■■□□ 2.15
NCLN-205ENST00000590671 KIF3BO15066 747 aa28.51■■■□□ 2.15
NCLN-205ENST00000590671 HSPA5P11021 654 aaKnown RBP28.5■■■□□ 2.15
NCLN-205ENST00000590671 ZNF326Q5BKZ1 582 aaKnown RBP28.5■■■□□ 2.15
NCLN-205ENST00000590671 NEO1Q92859 1461 aa28.5■■■□□ 2.15
NCLN-205ENST00000590671 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
NCLN-205ENST00000590671 FAM69CQ0P6D2 419 aa28.48■■■□□ 2.15
NCLN-205ENST00000590671 CCDC144AA2RUR9 1427 aa28.47■■■□□ 2.15
NCLN-205ENST00000590671 GLI2P10070 1586 aa28.47■■■□□ 2.15
NCLN-205ENST00000590671 DIP2BQ9P265 1576 aa28.45■■■□□ 2.14
NCLN-205ENST00000590671 MLH3Q9UHC1 1453 aa28.44■■■□□ 2.14
NCLN-205ENST00000590671 KDM2AQ9Y2K7 1162 aa28.44■■■□□ 2.14
NCLN-205ENST00000590671 MROH1Q8NDA8 1641 aa28.44■■■□□ 2.14
NCLN-205ENST00000590671 E9PCH4 1651 aa28.43■■■□□ 2.14
NCLN-205ENST00000590671 EIF4G2P78344 907 aaKnown RBP eCLIP28.43■■■□□ 2.14
NCLN-205ENST00000590671 HECW2Q9P2P5 1572 aa28.42■■■□□ 2.14
NCLN-205ENST00000590671 DCAF11Q8TEB1 546 aa28.41■■■□□ 2.14
NCLN-205ENST00000590671 EIF2AK4Q9P2K8 1649 aaKnown RBP28.41■■■□□ 2.14
NCLN-205ENST00000590671 A2MP01023 1474 aa28.41■■■□□ 2.14
NCLN-205ENST00000590671 FRMPD1Q5SYB0 1578 aa28.4■■■□□ 2.14
NCLN-205ENST00000590671 VWDEQ8N2E2 1590 aa28.4■■■□□ 2.14
NCLN-205ENST00000590671 RGL3Q3MIN7 710 aa28.39■■■□□ 2.14
NCLN-205ENST00000590671 ATP10AO60312 1499 aa28.39■■■□□ 2.14
NCLN-205ENST00000590671 ABCA6Q8N139 1617 aa28.39■■■□□ 2.13
NCLN-205ENST00000590671 PRDM15P57071 1507 aaPredicted RBP28.38■■■□□ 2.13
NCLN-205ENST00000590671 UHRF1BP1Q6BDS2 1440 aa28.37■■■□□ 2.13
NCLN-205ENST00000590671 RICTORQ6R327 1708 aa28.35■■■□□ 2.13
NCLN-205ENST00000590671 KANK1Q14678 1352 aa28.35■■■□□ 2.13
NCLN-205ENST00000590671 TSPOAP1O95153 1857 aa28.35■■■□□ 2.13
NCLN-205ENST00000590671 TET3O43151 1660 aa28.34■■■□□ 2.13
NCLN-205ENST00000590671 SPATA31E1Q6ZUB1 1445 aa28.34■■■□□ 2.13
NCLN-205ENST00000590671 WASHC2AQ641Q2 1341 aa28.33■■■□□ 2.13
NCLN-205ENST00000590671 C11orf95C9JLR9 678 aaPredicted RBP28.33■■■□□ 2.13
NCLN-205ENST00000590671 YTHDC1Q96MU7 727 aaKnown RBP28.33■■■□□ 2.13
NCLN-205ENST00000590671 PPRC1Q5VV67 1664 aaKnown RBP28.31■■■□□ 2.12
NCLN-205ENST00000590671 YEATS2Q9ULM3 1422 aa28.29■■■□□ 2.12
NCLN-205ENST00000590671 PTPRTO14522 1441 aa28.28■■■□□ 2.12
NCLN-205ENST00000590671 DIP2CQ9Y2E4 1556 aa28.28■■■□□ 2.12
NCLN-205ENST00000590671 RNF17Q9BXT8 1623 aaKnown RBP28.28■■■□□ 2.12
NCLN-205ENST00000590671 RALGAPBQ86X10 1494 aa28.27■■■□□ 2.12
NCLN-205ENST00000590671 GGT6Q6P531 493 aa28.27■■■□□ 2.12
NCLN-205ENST00000590671 TRPM2O94759 1503 aa28.27■■■□□ 2.12
NCLN-205ENST00000590671 SPHKAPQ2M3C7 1700 aa28.27■■■□□ 2.12
NCLN-205ENST00000590671 CEP152O94986 1710 aa28.24■■■□□ 2.11
NCLN-205ENST00000590671 USP47Q96K76 1375 aa28.24■■■□□ 2.11
NCLN-205ENST00000590671 PRAG1Q86YV5 1406 aa28.24■■■□□ 2.11
NCLN-205ENST00000590671 CLTCL1P53675 1640 aa28.23■■■□□ 2.11
NCLN-205ENST00000590671 EFCAB6Q5THR3 1501 aa28.22■■■□□ 2.11
NCLN-205ENST00000590671 CARD11Q9BXL7 1154 aa28.2■■■□□ 2.11
NCLN-205ENST00000590671 UGGT1Q9NYU2 1555 aa28.2■■■□□ 2.1
NCLN-205ENST00000590671 KIF13AQ9H1H9 1805 aa28.2■■■□□ 2.1
NCLN-205ENST00000590671 LMTK2Q8IWU2 1503 aa28.19■■■□□ 2.1
NCLN-205ENST00000590671 CCDC7Q96M83 1385 aa28.18■■■□□ 2.1
NCLN-205ENST00000590671 BCORL1Q5H9F3 1711 aa28.18■■■□□ 2.1
NCLN-205ENST00000590671 NBPF1Q3BBV0 1214 aa28.16■■■□□ 2.1
NCLN-205ENST00000590671 TRPM1Q7Z4N2 1603 aa28.16■■■□□ 2.1
NCLN-205ENST00000590671 ROCK2O75116 1388 aaKnown RBP28.15■■■□□ 2.1
NCLN-205ENST00000590671 KIF7Q2M1P5 1343 aa28.14■■■□□ 2.1
NCLN-205ENST00000590671 WASHC2CQ9Y4E1 1318 aa28.13■■■□□ 2.09
NCLN-205ENST00000590671 NPATQ14207 1427 aa28.13■■■□□ 2.09
NCLN-205ENST00000590671 ABCC3O15438 1527 aa28.13■■■□□ 2.09
NCLN-205ENST00000590671 ZMYM4Q5VZL5 1548 aa28.13■■■□□ 2.09
NCLN-205ENST00000590671 COL17A1Q9UMD9 1497 aaPredicted RBP28.1■■■□□ 2.09
NCLN-205ENST00000590671 CFAP65Q6ZU64 1925 aaKnown RBP28.09■■■□□ 2.09
NCLN-205ENST00000590671 ST20-MTHFSA0A0A6YYL1 179 aa28.07■■■□□ 2.08
NCLN-205ENST00000590671 ANP32CO43423 234 aa28.06■■■□□ 2.08
NCLN-205ENST00000590671 POLR1AO95602 1720 aaPredicted RBP28.05■■■□□ 2.08
NCLN-205ENST00000590671 CENPBP07199 599 aaPredicted RBP28.04■■■□□ 2.08
NCLN-205ENST00000590671 CAMSAP1Q5T5Y3 1602 aa28.03■■■□□ 2.08
NCLN-205ENST00000590671 CNTLNQ9NXG0 1405 aa28.03■■■□□ 2.08
NCLN-205ENST00000590671 GPRASP1Q5JY77 1395 aa28.03■■■□□ 2.08
NCLN-205ENST00000590671 MADDQ8WXG6 1647 aa28.02■■■□□ 2.08
NCLN-205ENST00000590671 SIGLEC1Q9BZZ2 1709 aa28.01■■■□□ 2.07
NCLN-205ENST00000590671 MROH2AA6NES4 1674 aa28■■■□□ 2.07
NCLN-205ENST00000590671 POLR3GLQ9BT43 218 aa28■■■□□ 2.07
NCLN-205ENST00000590671 KIF1BO60333 1816 aa27.97■■■□□ 2.07
NCLN-205ENST00000590671 NEURL4Q96JN8 1562 aa27.95■■■□□ 2.06
NCLN-205ENST00000590671 CHGAP10645 457 aaKnown RBP27.94■■■□□ 2.06
NCLN-205ENST00000590671 LAMC1P11047 1609 aa27.93■■■□□ 2.06
NCLN-205ENST00000590671 NOS1P29475 1434 aa27.93■■■□□ 2.06
NCLN-205ENST00000590671 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
NCLN-205ENST00000590671 ADGRB3O60242 1522 aa27.92■■■□□ 2.06
NCLN-205ENST00000590671 SYNMO15061 1565 aa27.91■■■□□ 2.06
NCLN-205ENST00000590671 ZC3H13Q5T200 1668 aaKnown RBP27.9■■■□□ 2.06
NCLN-205ENST00000590671 CCER2I3L3R5 266 aa27.9■■■□□ 2.06
NCLN-205ENST00000590671 ARHGAP31Q2M1Z3 1444 aa27.88■■■□□ 2.05
NCLN-205ENST00000590671 IFT172Q9UG01 1749 aa27.88■■■□□ 2.05
NCLN-205ENST00000590671 REREQ9P2R6 1566 aa27.88■■■□□ 2.05
NCLN-205ENST00000590671 ARID4BQ4LE39 1312 aaPredicted RBP27.86■■■□□ 2.05
NCLN-205ENST00000590671 STAC3Q96MF2 364 aa27.86■■■□□ 2.05
NCLN-205ENST00000590671 TESK2Q96S53 571 aa27.86■■■□□ 2.05
NCLN-205ENST00000590671 MYOM2P54296 1465 aa27.85■■■□□ 2.05
NCLN-205ENST00000590671 ARHGEF40Q8TER5 1519 aa27.85■■■□□ 2.05
NCLN-205ENST00000590671 SCAF1Q9H7N4 1312 aaKnown RBP27.85■■■□□ 2.05
NCLN-205ENST00000590671 MLECQ14165 292 aa27.85■■■□□ 2.05
NCLN-205ENST00000590671 AGLP35573 1532 aa27.84■■■□□ 2.05
NCLN-205ENST00000590671 CFAP70Q5T0N1 1121 aa27.84■■■□□ 2.05
NCLN-205ENST00000590671 PIK3C2BO00750 1634 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms