RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
TREM1-206ENST00000589882 RIMBP3CA6NJZ7 1639 aa15.08■□□□□ 0.01
TREM1-206ENST00000589882 RIMBP3BA6NNM3 1639 aa15.08■□□□□ 0.01
TREM1-206ENST00000589882 RIMBP3Q9UFD9 1639 aa15.08■□□□□ 0.01
TREM1-206ENST00000589882 TEX14Q8IWB6 1497 aa15.08■□□□□ 0.01
TREM1-206ENST00000589882 MCM4P33991 863 aa15.08■□□□□ 0.01
TREM1-206ENST00000589882 SKAP1Q86WV1 359 aa15.08■□□□□ 0
TREM1-206ENST00000589882 DENND4BO75064 1496 aaPredicted RBP15.07■□□□□ 0
TREM1-206ENST00000589882 ERBB4Q15303 1308 aa15.07■□□□□ 0
TREM1-206ENST00000589882 OFD1O75665 1012 aa15.07■□□□□ 0
TREM1-206ENST00000589882 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
TREM1-206ENST00000589882 ARXQ96QS3 562 aa15.06■□□□□ 0
TREM1-206ENST00000589882 SLKQ9H2G2 1235 aaPredicted RBP15.06■□□□□ 0
TREM1-206ENST00000589882 EFCAB5A4FU69 1503 aa15.05■□□□□ 0
TREM1-206ENST00000589882 DDX11L8A8MPP1 907 aa15.05■□□□□ -0
TREM1-206ENST00000589882 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.05■□□□□ -0
TREM1-206ENST00000589882 CCDC144AA2RUR9 1427 aa15.05■□□□□ -0
TREM1-206ENST00000589882 TRAK2O60296 914 aa15.04■□□□□ -0
TREM1-206ENST00000589882 NBPF8Q3BBV2 869 aa15.03■□□□□ -0
TREM1-206ENST00000589882 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
TREM1-206ENST00000589882 USP19O94966 1318 aa15.03■□□□□ -0
TREM1-206ENST00000589882 FGD5Q6ZNL6 1462 aa15.03■□□□□ -0
TREM1-206ENST00000589882 PLIN1O60240 522 aa15.03■□□□□ -0
TREM1-206ENST00000589882 TNNT2P45379 298 aaPredicted RBP15.03■□□□□ -0
TREM1-206ENST00000589882 MAPK8IP3Q9UPT6 1336 aa15.02■□□□□ -0
TREM1-206ENST00000589882 ARHGEF11O15085 1522 aa15.02■□□□□ -0
TREM1-206ENST00000589882 CHD1O14646 1710 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 PTMSP20962 102 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
TREM1-206ENST00000589882 RIPK4P57078 832 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 CCDC173Q0VFZ6 552 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 ZSCAN30Q86W11 494 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 NLRP13Q86W25 1043 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 MPHOSPH9Q99550 1183 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
TREM1-206ENST00000589882 EIF3AQ14152 1382 aaKnown RBP15.01□□□□□ -0.01
TREM1-206ENST00000589882 USP47Q96K76 1375 aa15.01□□□□□ -0.01
TREM1-206ENST00000589882 DMTNQ08495 405 aa15□□□□□ -0.01
TREM1-206ENST00000589882 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
TREM1-206ENST00000589882 CHMP5Q9NZZ3 219 aa15□□□□□ -0.01
TREM1-206ENST00000589882 ZMYM3Q14202 1370 aa15□□□□□ -0.01
TREM1-206ENST00000589882 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
TREM1-206ENST00000589882 TAF7LQ5H9L4 462 aa14.99□□□□□ -0.01
TREM1-206ENST00000589882 BBXQ8WY36 941 aaPredicted RBP14.99□□□□□ -0.01
TREM1-206ENST00000589882 BLMP54132 1417 aaPredicted RBP14.99□□□□□ -0.01
TREM1-206ENST00000589882 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
TREM1-206ENST00000589882 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
TREM1-206ENST00000589882 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
TREM1-206ENST00000589882 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
TREM1-206ENST00000589882 ANP32BQ92688 251 aaKnown RBP14.98□□□□□ -0.01
TREM1-206ENST00000589882 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
TREM1-206ENST00000589882 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
TREM1-206ENST00000589882 MSNP26038 577 aaKnown RBP14.97□□□□□ -0.01
TREM1-206ENST00000589882 ATP1B4Q9UN42 357 aaPredicted RBP14.97□□□□□ -0.01
TREM1-206ENST00000589882 NLRP1Q9C000 1473 aa14.97□□□□□ -0.01
TREM1-206ENST00000589882 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
TREM1-206ENST00000589882 FAM13BQ9NYF5 915 aa14.97□□□□□ -0.01
TREM1-206ENST00000589882 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.01
TREM1-206ENST00000589882 KIF14Q15058 1648 aa14.96□□□□□ -0.01
TREM1-206ENST00000589882 PPP1R9BQ96SB3 815 aa14.96□□□□□ -0.01
TREM1-206ENST00000589882 IGF1RP08069 1367 aa14.96□□□□□ -0.02
TREM1-206ENST00000589882 KDM5CP41229 1560 aa14.96□□□□□ -0.02
TREM1-206ENST00000589882 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
TREM1-206ENST00000589882 SUPT6HQ7KZ85 1726 aaKnown RBP14.95□□□□□ -0.02
TREM1-206ENST00000589882 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
TREM1-206ENST00000589882 SKOR2Q2VWA4 1001 aaPredicted RBP14.95□□□□□ -0.02
TREM1-206ENST00000589882 HS1BP3Q53T59 392 aa14.95□□□□□ -0.02
TREM1-206ENST00000589882 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
TREM1-206ENST00000589882 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
TREM1-206ENST00000589882 CARMIL1Q5VZK9 1371 aa14.94□□□□□ -0.02
TREM1-206ENST00000589882 CTTNBP2Q8WZ74 1663 aa14.94□□□□□ -0.02
TREM1-206ENST00000589882 MBD5Q9P267 1494 aa14.94□□□□□ -0.02
TREM1-206ENST00000589882 KIF20AO95235 890 aa14.94□□□□□ -0.02
TREM1-206ENST00000589882 GTF2E1P29083 439 aaPredicted RBP14.94□□□□□ -0.02
TREM1-206ENST00000589882 C20orf194Q5TEA3 1177 aa14.94□□□□□ -0.02
TREM1-206ENST00000589882 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
TREM1-206ENST00000589882 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
TREM1-206ENST00000589882 GTPBP4Q9BZE4 634 aaKnown RBP14.93□□□□□ -0.02
TREM1-206ENST00000589882 CSPP1Q1MSJ5 1256 aa14.93□□□□□ -0.02
TREM1-206ENST00000589882 IPO4Q8TEX9 1081 aaKnown RBP14.93□□□□□ -0.02
TREM1-206ENST00000589882 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
TREM1-206ENST00000589882 TAF3Q5VWG9 929 aa14.92□□□□□ -0.02
TREM1-206ENST00000589882 ZHX1Q9UKY1 873 aaPredicted RBP14.92□□□□□ -0.02
TREM1-206ENST00000589882 PARD3Q8TEW0 1356 aa14.92□□□□□ -0.02
TREM1-206ENST00000589882 E9PCH4 1651 aa14.92□□□□□ -0.02
TREM1-206ENST00000589882 STAC3Q96MF2 364 aa14.91□□□□□ -0.02
TREM1-206ENST00000589882 CCDC94Q9BW85 323 aaPredicted RBP14.91□□□□□ -0.02
TREM1-206ENST00000589882 RAD54L2Q9Y4B4 1467 aa14.91□□□□□ -0.02
TREM1-206ENST00000589882 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
TREM1-206ENST00000589882 RRP7BPQ9NSQ0 103 aa14.9□□□□□ -0.02
TREM1-206ENST00000589882 UQCRHLA0A096LP55 91 aa14.89□□□□□ -0.03
TREM1-206ENST00000589882 LETM1O95202 739 aaPredicted RBP14.89□□□□□ -0.03
TREM1-206ENST00000589882 UQCRHP07919 91 aa14.89□□□□□ -0.03
TREM1-206ENST00000589882 ZNF500O60304 480 aaPredicted RBP14.89□□□□□ -0.03
TREM1-206ENST00000589882 R3HCC1Q9Y3T6 440 aaKnown RBP14.89□□□□□ -0.03
TREM1-206ENST00000589882 PPP4R3BQ5MIZ7 849 aa14.88□□□□□ -0.03
TREM1-206ENST00000589882 UGGT2Q9NYU1 1516 aa14.87□□□□□ -0.03
TREM1-206ENST00000589882 GBP4Q96PP9 640 aa14.87□□□□□ -0.03
TREM1-206ENST00000589882 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
TREM1-206ENST00000589882 KDM6BO15054 1643 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms