RNA–Protein interactions for RNA: ENST00000589562.1

SLFN11-209, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-209ENST00000589562 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
SLFN11-209ENST00000589562 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
SLFN11-209ENST00000589562 FECHP22830 423 aa12.63□□□□□ -0.39
SLFN11-209ENST00000589562 POTEB3A0JP26 581 aa12.62□□□□□ -0.39
SLFN11-209ENST00000589562 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
SLFN11-209ENST00000589562 POTEBQ6S5H4 581 aa12.62□□□□□ -0.39
SLFN11-209ENST00000589562 FCHSD2O94868 740 aa12.61□□□□□ -0.39
SLFN11-209ENST00000589562 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
SLFN11-209ENST00000589562 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
SLFN11-209ENST00000589562 PSDA5PKW4 1024 aaPredicted RBP12.6□□□□□ -0.39
SLFN11-209ENST00000589562 BCL2L12Q9HB09 334 aa12.6□□□□□ -0.39
SLFN11-209ENST00000589562 COL9A1P20849 921 aa12.59□□□□□ -0.39
SLFN11-209ENST00000589562 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
SLFN11-209ENST00000589562 GNPATO15228 680 aa12.57□□□□□ -0.4
SLFN11-209ENST00000589562 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
SLFN11-209ENST00000589562 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
SLFN11-209ENST00000589562 HIC1Q14526 733 aa12.55□□□□□ -0.4
SLFN11-209ENST00000589562 AXIN2Q9Y2T1 843 aa12.55□□□□□ -0.4
SLFN11-209ENST00000589562 PTPREP23469 700 aa12.54□□□□□ -0.4
SLFN11-209ENST00000589562 PSEN2P49810 448 aa12.54□□□□□ -0.4
SLFN11-209ENST00000589562 KRI1Q8N9T8 703 aaKnown RBP12.53□□□□□ -0.4
SLFN11-209ENST00000589562 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
SLFN11-209ENST00000589562 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
SLFN11-209ENST00000589562 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
SLFN11-209ENST00000589562 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
SLFN11-209ENST00000589562 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
SLFN11-209ENST00000589562 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
SLFN11-209ENST00000589562 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
SLFN11-209ENST00000589562 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
SLFN11-209ENST00000589562 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
SLFN11-209ENST00000589562 PRSS12P56730 875 aa12.47□□□□□ -0.41
SLFN11-209ENST00000589562 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
SLFN11-209ENST00000589562 IRF6O14896 467 aa12.46□□□□□ -0.41
SLFN11-209ENST00000589562 CERKQ8TCT0 537 aa12.46□□□□□ -0.41
SLFN11-209ENST00000589562 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
SLFN11-209ENST00000589562 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
SLFN11-209ENST00000589562 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
SLFN11-209ENST00000589562 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
SLFN11-209ENST00000589562 TTC13Q8NBP0 860 aa12.45□□□□□ -0.42
SLFN11-209ENST00000589562 AK7Q96M32 723 aa12.44□□□□□ -0.42
SLFN11-209ENST00000589562 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
SLFN11-209ENST00000589562 TRIM66O15016 1216 aa12.42□□□□□ -0.42
SLFN11-209ENST00000589562 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
SLFN11-209ENST00000589562 ADGRG1Q9Y653 693 aa12.41□□□□□ -0.42
SLFN11-209ENST00000589562 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
SLFN11-209ENST00000589562 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
SLFN11-209ENST00000589562 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
SLFN11-209ENST00000589562 PBX2P40425 430 aa12.39□□□□□ -0.43
SLFN11-209ENST00000589562 NLRP7Q8WX94 980 aa12.39□□□□□ -0.43
SLFN11-209ENST00000589562 SMAPO00193 183 aa12.37□□□□□ -0.43
SLFN11-209ENST00000589562 BRPF1P55201 1214 aaPredicted RBP12.37□□□□□ -0.43
SLFN11-209ENST00000589562 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
SLFN11-209ENST00000589562 PDE4DQ08499 809 aa12.35□□□□□ -0.43
SLFN11-209ENST00000589562 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
SLFN11-209ENST00000589562 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
SLFN11-209ENST00000589562 METTL3Q86U44 580 aaKnown RBP12.34□□□□□ -0.43
SLFN11-209ENST00000589562 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
SLFN11-209ENST00000589562 PNMA3Q9UL41 463 aa12.34□□□□□ -0.43
SLFN11-209ENST00000589562 VPS9D1Q9Y2B5 631 aa12.34□□□□□ -0.43
SLFN11-209ENST00000589562 POTEMA6NI47 508 aa12.33□□□□□ -0.44
SLFN11-209ENST00000589562 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLFN11-209ENST00000589562 NEUROD2Q15784 382 aa12.33□□□□□ -0.44
SLFN11-209ENST00000589562 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
SLFN11-209ENST00000589562 TATDN2Q93075 761 aa12.32□□□□□ -0.44
SLFN11-209ENST00000589562 EYA1Q99502 592 aa12.32□□□□□ -0.44
SLFN11-209ENST00000589562 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
SLFN11-209ENST00000589562 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
SLFN11-209ENST00000589562 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
SLFN11-209ENST00000589562 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
SLFN11-209ENST00000589562 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
SLFN11-209ENST00000589562 SEPT9Q9UHD8 586 aaPredicted RBP12.31□□□□□ -0.44
SLFN11-209ENST00000589562 NBPF26B4DH59 902 aa12.3□□□□□ -0.44
SLFN11-209ENST00000589562 AMHR2Q16671 573 aa12.3□□□□□ -0.44
SLFN11-209ENST00000589562 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
SLFN11-209ENST00000589562 OATP04181 439 aa12.29□□□□□ -0.44
SLFN11-209ENST00000589562 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
SLFN11-209ENST00000589562 PARP9Q8IXQ6 854 aa12.29□□□□□ -0.44
SLFN11-209ENST00000589562 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
SLFN11-209ENST00000589562 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
SLFN11-209ENST00000589562 ADGRD1Q6QNK2 874 aa12.28□□□□□ -0.44
SLFN11-209ENST00000589562 RBM46Q8TBY0 533 aaKnown RBP12.28□□□□□ -0.44
SLFN11-209ENST00000589562 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
SLFN11-209ENST00000589562 TTLL12Q14166 644 aaPredicted RBP12.26□□□□□ -0.45
SLFN11-209ENST00000589562 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
SLFN11-209ENST00000589562 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
SLFN11-209ENST00000589562 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
SLFN11-209ENST00000589562 TK2O00142 265 aa12.24□□□□□ -0.45
SLFN11-209ENST00000589562 TMUB1Q9BVT8 246 aa12.24□□□□□ -0.45
SLFN11-209ENST00000589562 HRO43593 1189 aa12.23□□□□□ -0.45
SLFN11-209ENST00000589562 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
SLFN11-209ENST00000589562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.2□□□□□ -0.46
SLFN11-209ENST00000589562 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
SLFN11-209ENST00000589562 MS4A1P11836 297 aa12.19□□□□□ -0.46
SLFN11-209ENST00000589562 DNAJB2P25686 324 aa12.19□□□□□ -0.46
SLFN11-209ENST00000589562 CLCN1P35523 988 aa12.18□□□□□ -0.46
SLFN11-209ENST00000589562 TMEM134Q9H6X4 195 aa12.18□□□□□ -0.46
SLFN11-209ENST00000589562 FAM98CQ17RN3 349 aaKnown RBP12.17□□□□□ -0.46
SLFN11-209ENST00000589562 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
SLFN11-209ENST00000589562 SWT1Q5T5J6 900 aaKnown RBP12.16□□□□□ -0.46
SLFN11-209ENST00000589562 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms