RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
VPS25-202ENST00000589219 FBXO41Q8TF61 875 aa14.31□□□□□ -0.12
VPS25-202ENST00000589219 CFDP1Q9UEE9 299 aaPredicted RBP14.31□□□□□ -0.12
VPS25-202ENST00000589219 TONSLQ96HA7 1378 aa14.31□□□□□ -0.12
VPS25-202ENST00000589219 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
VPS25-202ENST00000589219 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
VPS25-202ENST00000589219 CEBPAP49715 358 aaPredicted RBP14.29□□□□□ -0.12
VPS25-202ENST00000589219 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
VPS25-202ENST00000589219 SYCP2Q9BX26 1530 aa14.29□□□□□ -0.12
VPS25-202ENST00000589219 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS25-202ENST00000589219 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
VPS25-202ENST00000589219 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
VPS25-202ENST00000589219 ARHGEF5Q12774 1597 aa14.27□□□□□ -0.12
VPS25-202ENST00000589219 UHRF1BP1Q6BDS2 1440 aa14.27□□□□□ -0.12
VPS25-202ENST00000589219 C3P01024 1663 aa14.26□□□□□ -0.13
VPS25-202ENST00000589219 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
VPS25-202ENST00000589219 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
VPS25-202ENST00000589219 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
VPS25-202ENST00000589219 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
VPS25-202ENST00000589219 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
VPS25-202ENST00000589219 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
VPS25-202ENST00000589219 ANKRD30AQ9BXX3 1397 aa14.23□□□□□ -0.13
VPS25-202ENST00000589219 INO80Q9ULG1 1556 aaPredicted RBP14.23□□□□□ -0.13
VPS25-202ENST00000589219 MROH2AA6NES4 1674 aa14.23□□□□□ -0.13
VPS25-202ENST00000589219 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
VPS25-202ENST00000589219 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.13
VPS25-202ENST00000589219 MIER1Q8N108 512 aa14.21□□□□□ -0.13
VPS25-202ENST00000589219 A2MP01023 1474 aa14.2□□□□□ -0.14
VPS25-202ENST00000589219 TRIM52Q96A61 297 aa14.2□□□□□ -0.14
VPS25-202ENST00000589219 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
VPS25-202ENST00000589219 STRCQ7RTU9 1775 aa14.19□□□□□ -0.14
VPS25-202ENST00000589219 CCDC141Q6ZP82 1450 aa14.19□□□□□ -0.14
VPS25-202ENST00000589219 PLXNC1O60486 1568 aa14.19□□□□□ -0.14
VPS25-202ENST00000589219 MAST1Q9Y2H9 1570 aa14.18□□□□□ -0.14
VPS25-202ENST00000589219 NPATQ14207 1427 aa14.18□□□□□ -0.14
VPS25-202ENST00000589219 MPHOSPH9Q99550 1183 aa14.18□□□□□ -0.14
VPS25-202ENST00000589219 PZPP20742 1482 aa14.18□□□□□ -0.14
VPS25-202ENST00000589219 RPRD2Q5VT52 1461 aaKnown RBP14.18□□□□□ -0.14
VPS25-202ENST00000589219 RTEL1-TNFRSF6BF6WH68 1400 aa14.17□□□□□ -0.14
VPS25-202ENST00000589219 RSPH4AQ5TD94 716 aa14.17□□□□□ -0.14
VPS25-202ENST00000589219 CERKQ8TCT0 537 aa14.17□□□□□ -0.14
VPS25-202ENST00000589219 ZMYM3Q14202 1370 aa14.17□□□□□ -0.14
VPS25-202ENST00000589219 MBD5Q9P267 1494 aa14.17□□□□□ -0.14
VPS25-202ENST00000589219 ANKRD30BQ9BXX2 1392 aa14.16□□□□□ -0.14
VPS25-202ENST00000589219 CLTCQ00610 1675 aaKnown RBP14.16□□□□□ -0.14
VPS25-202ENST00000589219 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
VPS25-202ENST00000589219 GGT6Q6P531 493 aa14.15□□□□□ -0.14
VPS25-202ENST00000589219 PTPRTO14522 1441 aa14.14□□□□□ -0.15
VPS25-202ENST00000589219 DHX29Q7Z478 1369 aaKnown RBP14.12□□□□□ -0.15
VPS25-202ENST00000589219 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
VPS25-202ENST00000589219 TSPY4P0CV99 314 aa14.1□□□□□ -0.15
VPS25-202ENST00000589219 TSPY10P0CW01 314 aa14.1□□□□□ -0.15
VPS25-202ENST00000589219 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
VPS25-202ENST00000589219 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
VPS25-202ENST00000589219 CAMSAP1Q5T5Y3 1602 aa14.09□□□□□ -0.15
VPS25-202ENST00000589219 ZNF142P52746 1687 aaPredicted RBP14.09□□□□□ -0.15
VPS25-202ENST00000589219 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.15
VPS25-202ENST00000589219 FAM135AQ9P2D6 1515 aa14.08□□□□□ -0.16
VPS25-202ENST00000589219 UNC13BO14795 1591 aa14.08□□□□□ -0.16
VPS25-202ENST00000589219 KIF3BO15066 747 aa14.07□□□□□ -0.16
VPS25-202ENST00000589219 CEP170BQ9Y4F5 1589 aaPredicted RBP14.06□□□□□ -0.16
VPS25-202ENST00000589219 PKD2Q13563 968 aa14.05□□□□□ -0.16
VPS25-202ENST00000589219 PLA2R1Q13018 1463 aa14.05□□□□□ -0.16
VPS25-202ENST00000589219 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
VPS25-202ENST00000589219 YTHDC1Q96MU7 727 aaKnown RBP14.03□□□□□ -0.16
VPS25-202ENST00000589219 DUOX2Q9NRD8 1548 aa14.03□□□□□ -0.16
VPS25-202ENST00000589219 A2ML1A8K2U0 1454 aa14.02□□□□□ -0.16
VPS25-202ENST00000589219 IQSEC2Q5JU85 1478 aa14.02□□□□□ -0.16
VPS25-202ENST00000589219 ERBINQ96RT1 1412 aa14.02□□□□□ -0.16
VPS25-202ENST00000589219 NCKAP5LQ9HCH0 1330 aa14.02□□□□□ -0.17
VPS25-202ENST00000589219 NUP155O75694 1391 aa14.01□□□□□ -0.17
VPS25-202ENST00000589219 L3MBTL2Q969R5 705 aa14.01□□□□□ -0.17
VPS25-202ENST00000589219 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
VPS25-202ENST00000589219 TNRQ92752 1358 aa14□□□□□ -0.17
VPS25-202ENST00000589219 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
VPS25-202ENST00000589219 EIF4G2P78344 907 aaKnown RBP eCLIP13.99□□□□□ -0.17
VPS25-202ENST00000589219 EIF2AK4Q9P2K8 1649 aaKnown RBP13.99□□□□□ -0.17
VPS25-202ENST00000589219 ZC3H13Q5T200 1668 aaKnown RBP13.98□□□□□ -0.17
VPS25-202ENST00000589219 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
VPS25-202ENST00000589219 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
VPS25-202ENST00000589219 FBXO31Q5XUX0 539 aaPredicted RBP13.97□□□□□ -0.17
VPS25-202ENST00000589219 POLR1AO95602 1720 aaPredicted RBP13.97□□□□□ -0.17
VPS25-202ENST00000589219 NLRP1Q9C000 1473 aa13.96□□□□□ -0.17
VPS25-202ENST00000589219 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
VPS25-202ENST00000589219 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
VPS25-202ENST00000589219 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
VPS25-202ENST00000589219 ANP32CO43423 234 aa13.95□□□□□ -0.18
VPS25-202ENST00000589219 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
VPS25-202ENST00000589219 ZNF335Q9H4Z2 1342 aaPredicted RBP13.94□□□□□ -0.18
VPS25-202ENST00000589219 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
VPS25-202ENST00000589219 ANKLE2Q86XL3 938 aa13.93□□□□□ -0.18
VPS25-202ENST00000589219 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
VPS25-202ENST00000589219 ABCC3O15438 1527 aa13.93□□□□□ -0.18
VPS25-202ENST00000589219 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
VPS25-202ENST00000589219 SPATA31E1Q6ZUB1 1445 aa13.92□□□□□ -0.18
VPS25-202ENST00000589219 HIRIP3Q9BW71 556 aaPredicted RBP13.91□□□□□ -0.18
VPS25-202ENST00000589219 CEP152O94986 1710 aa13.9□□□□□ -0.18
VPS25-202ENST00000589219 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
VPS25-202ENST00000589219 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
VPS25-202ENST00000589219 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms