RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 TSPY10P0CW01 314 aa25.08■■□□□ 1.61
TMEM259-206ENST00000589055 PTPRKQ15262 1439 aa25.07■■□□□ 1.6
TMEM259-206ENST00000589055 PTPN23Q9H3S7 1636 aa25.06■■□□□ 1.6
TMEM259-206ENST00000589055 MYO3AQ8NEV4 1616 aa25.04■■□□□ 1.6
TMEM259-206ENST00000589055 KDM5DQ9BY66 1539 aa25.02■■□□□ 1.6
TMEM259-206ENST00000589055 CROCC2H7BZ55 1655 aa25.01■■□□□ 1.59
TMEM259-206ENST00000589055 PPP6R1Q9UPN7 881 aa25.01■■□□□ 1.59
TMEM259-206ENST00000589055 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
TMEM259-206ENST00000589055 ABCC5O15440 1437 aa24.99■■□□□ 1.59
TMEM259-206ENST00000589055 ZNF142P52746 1687 aaPredicted RBP24.99■■□□□ 1.59
TMEM259-206ENST00000589055 NCOA1Q15788 1441 aa24.99■■□□□ 1.59
TMEM259-206ENST00000589055 CAMSAP1Q5T5Y3 1602 aa24.98■■□□□ 1.59
TMEM259-206ENST00000589055 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
TMEM259-206ENST00000589055 RNF17Q9BXT8 1623 aaKnown RBP24.97■■□□□ 1.59
TMEM259-206ENST00000589055 CEP170BQ9Y4F5 1589 aaPredicted RBP24.97■■□□□ 1.59
TMEM259-206ENST00000589055 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
TMEM259-206ENST00000589055 WASHC2CQ9Y4E1 1318 aa24.95■■□□□ 1.58
TMEM259-206ENST00000589055 DNMT1P26358 1616 aaKnown RBP24.95■■□□□ 1.58
TMEM259-206ENST00000589055 FBXO31Q5XUX0 539 aaPredicted RBP24.95■■□□□ 1.58
TMEM259-206ENST00000589055 FAM135AQ9P2D6 1515 aa24.95■■□□□ 1.58
TMEM259-206ENST00000589055 SHANK2Q9UPX8 1470 aa24.95■■□□□ 1.58
TMEM259-206ENST00000589055 DAPK1P53355 1430 aa24.95■■□□□ 1.58
TMEM259-206ENST00000589055 MROH1Q8NDA8 1641 aa24.94■■□□□ 1.58
TMEM259-206ENST00000589055 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
TMEM259-206ENST00000589055 UBAP1LF5GYI3 381 aa24.94■■□□□ 1.58
TMEM259-206ENST00000589055 PZPP20742 1482 aa24.93■■□□□ 1.58
TMEM259-206ENST00000589055 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
TMEM259-206ENST00000589055 KIF15Q9NS87 1388 aa24.91■■□□□ 1.58
TMEM259-206ENST00000589055 ABCC3O15438 1527 aa24.91■■□□□ 1.58
TMEM259-206ENST00000589055 TNRQ92752 1358 aa24.89■■□□□ 1.57
TMEM259-206ENST00000589055 NCKAP5LQ9HCH0 1330 aa24.88■■□□□ 1.57
TMEM259-206ENST00000589055 RRP7BPQ9NSQ0 103 aa24.88■■□□□ 1.57
TMEM259-206ENST00000589055 CEP152O94986 1710 aa24.88■■□□□ 1.57
TMEM259-206ENST00000589055 A2ML1A8K2U0 1454 aa24.88■■□□□ 1.57
TMEM259-206ENST00000589055 ZC3H13Q5T200 1668 aaKnown RBP24.87■■□□□ 1.57
TMEM259-206ENST00000589055 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
TMEM259-206ENST00000589055 PLA2R1Q13018 1463 aa24.83■■□□□ 1.57
TMEM259-206ENST00000589055 ZNF335Q9H4Z2 1342 aaPredicted RBP24.83■■□□□ 1.56
TMEM259-206ENST00000589055 ERBINQ96RT1 1412 aa24.82■■□□□ 1.56
TMEM259-206ENST00000589055 PRDM15P57071 1507 aaPredicted RBP24.81■■□□□ 1.56
TMEM259-206ENST00000589055 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
TMEM259-206ENST00000589055 ANKRD30AQ9BXX3 1397 aa24.78■■□□□ 1.56
TMEM259-206ENST00000589055 ERVK-7P63135 1459 aa24.77■■□□□ 1.56
TMEM259-206ENST00000589055 DEPDC5O75140 1603 aa24.77■■□□□ 1.56
TMEM259-206ENST00000589055 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
TMEM259-206ENST00000589055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.553e-8■□□□□ 9.4
TMEM259-206ENST00000589055 PKD2Q13563 968 aa24.75■■□□□ 1.55
TMEM259-206ENST00000589055 NLRP1Q9C000 1473 aa24.75■■□□□ 1.55
TMEM259-206ENST00000589055 CFAP65Q6ZU64 1925 aaKnown RBP24.74■■□□□ 1.55
TMEM259-206ENST00000589055 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
TMEM259-206ENST00000589055 POLR1AO95602 1720 aaPredicted RBP24.73■■□□□ 1.55
TMEM259-206ENST00000589055 NEURL4Q96JN8 1562 aa24.73■■□□□ 1.55
TMEM259-206ENST00000589055 UGGT1Q9NYU2 1555 aa24.73■■□□□ 1.55
TMEM259-206ENST00000589055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
TMEM259-206ENST00000589055 HSPA1LP34931 641 aa24.73■■□□□ 1.55
TMEM259-206ENST00000589055 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
TMEM259-206ENST00000589055 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
TMEM259-206ENST00000589055 VWDEQ8N2E2 1590 aa24.67■■□□□ 1.54
TMEM259-206ENST00000589055 ARHGAP31Q2M1Z3 1444 aa24.66■■□□□ 1.54
TMEM259-206ENST00000589055 KANK1Q14678 1352 aa24.65■■□□□ 1.54
TMEM259-206ENST00000589055 PIP4K2BP78356 416 aa24.64■■□□□ 1.54
TMEM259-206ENST00000589055 LMTK2Q8IWU2 1503 aa24.63■■□□□ 1.53
TMEM259-206ENST00000589055 THEMISQ8N1K5 641 aaPredicted RBP24.63■■□□□ 1.53
TMEM259-206ENST00000589055 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
TMEM259-206ENST00000589055 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
TMEM259-206ENST00000589055 TOM1O60784 492 aa24.6■■□□□ 1.53
TMEM259-206ENST00000589055 ANKLE2Q86XL3 938 aa24.6■■□□□ 1.53
TMEM259-206ENST00000589055 EFCAB6Q5THR3 1501 aa24.6■■□□□ 1.53
TMEM259-206ENST00000589055 CPS1P31327 1500 aa24.59■■□□□ 1.53
TMEM259-206ENST00000589055 NPHP4O75161 1426 aaPredicted RBP24.59■■□□□ 1.53
TMEM259-206ENST00000589055 PIK3C2BO00750 1634 aa24.58■■□□□ 1.53
TMEM259-206ENST00000589055 ITGAEP38570 1179 aa24.58■■□□□ 1.53
TMEM259-206ENST00000589055 SYNMO15061 1565 aa24.57■■□□□ 1.52
TMEM259-206ENST00000589055 MED14O60244 1454 aa24.56■■□□□ 1.52
TMEM259-206ENST00000589055 IQGAP1P46940 1657 aa24.56■■□□□ 1.52
TMEM259-206ENST00000589055 UNC13BO14795 1591 aa24.53■■□□□ 1.52
TMEM259-206ENST00000589055 ROCK1Q13464 1354 aa24.52■■□□□ 1.52
TMEM259-206ENST00000589055 NOS1P29475 1434 aa24.51■■□□□ 1.51
TMEM259-206ENST00000589055 ARHGAP23Q9P227 1491 aa24.51■■□□□ 1.51
TMEM259-206ENST00000589055 SLIT1O75093 1534 aa24.5■■□□□ 1.51
TMEM259-206ENST00000589055 SCAF11Q99590 1463 aaKnown RBP24.49■■□□□ 1.51
TMEM259-206ENST00000589055 TET3O43151 1660 aa24.49■■□□□ 1.51
TMEM259-206ENST00000589055 LTKP29376 864 aa24.48■■□□□ 1.51
TMEM259-206ENST00000589055 IDI1Q13907 227 aa24.47■■□□□ 1.51
TMEM259-206ENST00000589055 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
TMEM259-206ENST00000589055 GCC2Q8IWJ2 1684 aa24.45■■□□□ 1.5
TMEM259-206ENST00000589055 ALKQ9UM73 1620 aa24.44■■□□□ 1.5
TMEM259-206ENST00000589055 TXNDC2Q86VQ3 553 aa24.44■■□□□ 1.5
TMEM259-206ENST00000589055 STAG3Q9UJ98 1225 aa24.44■■□□□ 1.5
TMEM259-206ENST00000589055 ADGRB3O60242 1522 aa24.44■■□□□ 1.5
TMEM259-206ENST00000589055 TMEM2Q9UHN6 1383 aa24.43■■□□□ 1.5
TMEM259-206ENST00000589055 RPRD2Q5VT52 1461 aaKnown RBP24.43■■□□□ 1.5
TMEM259-206ENST00000589055 RRBP1Q9P2E9 1410 aaKnown RBP24.43■■□□□ 1.5
TMEM259-206ENST00000589055 E9PCH4 1651 aa24.42■■□□□ 1.5
TMEM259-206ENST00000589055 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
TMEM259-206ENST00000589055 IQGAP3Q86VI3 1631 aa24.42■■□□□ 1.5
TMEM259-206ENST00000589055 MYO5BQ9ULV0 1848 aa24.38■■□□□ 1.49
TMEM259-206ENST00000589055 EID1Q9Y6B2 187 aa24.37■■□□□ 1.49
TMEM259-206ENST00000589055 NUP155O75694 1391 aa24.37■■□□□ 1.49
TMEM259-206ENST00000589055 LRRC7Q96NW7 1537 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms