RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 TRIM44Q96DX7 344 aaPredicted RBP15.85■□□□□ 0.13
LRFN3-204ENST00000588831 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
LRFN3-204ENST00000588831 SPRYD3Q8NCJ5 442 aa15.84■□□□□ 0.13
LRFN3-204ENST00000588831 DHX29Q7Z478 1369 aaKnown RBP15.84■□□□□ 0.13
LRFN3-204ENST00000588831 EHBP1L1Q8N3D4 1523 aa15.83■□□□□ 0.13
LRFN3-204ENST00000588831 MYBBP1AQ9BQG0 1328 aaKnown RBP15.83■□□□□ 0.13
LRFN3-204ENST00000588831 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
LRFN3-204ENST00000588831 CANXP27824 592 aaKnown RBP15.82■□□□□ 0.12
LRFN3-204ENST00000588831 WDR43Q15061 677 aaKnown RBP eCLIP15.82■□□□□ 0.12
LRFN3-204ENST00000588831 DDRGK1Q96HY6 314 aa15.82■□□□□ 0.12
LRFN3-204ENST00000588831 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
LRFN3-204ENST00000588831 CUL7Q14999 1698 aa15.82■□□□□ 0.12
LRFN3-204ENST00000588831 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
LRFN3-204ENST00000588831 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
LRFN3-204ENST00000588831 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
LRFN3-204ENST00000588831 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
LRFN3-204ENST00000588831 CHGAP10645 457 aaKnown RBP15.8■□□□□ 0.12
LRFN3-204ENST00000588831 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
LRFN3-204ENST00000588831 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
LRFN3-204ENST00000588831 SLKQ9H2G2 1235 aaPredicted RBP15.79■□□□□ 0.12
LRFN3-204ENST00000588831 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
LRFN3-204ENST00000588831 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
LRFN3-204ENST00000588831 TCERG1O14776 1098 aaKnown RBP15.79■□□□□ 0.12
LRFN3-204ENST00000588831 FAM43AQ8N2R8 423 aa15.79■□□□□ 0.12
LRFN3-204ENST00000588831 CTTNBP2Q8WZ74 1663 aa15.78■□□□□ 0.12
LRFN3-204ENST00000588831 BACH2Q9BYV9 841 aa15.78■□□□□ 0.12
LRFN3-204ENST00000588831 FRAT2O75474 233 aaPredicted RBP15.77■□□□□ 0.11
LRFN3-204ENST00000588831 PLB1Q6P1J6 1458 aa15.77■□□□□ 0.11
LRFN3-204ENST00000588831 ANKRD30AQ9BXX3 1397 aa15.76■□□□□ 0.11
LRFN3-204ENST00000588831 CDK11BP21127 795 aaKnown RBP15.76■□□□□ 0.11
LRFN3-204ENST00000588831 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
LRFN3-204ENST00000588831 RALBP1Q15311 655 aa15.76■□□□□ 0.11
LRFN3-204ENST00000588831 BCL2L13Q9BXK5 485 aa15.75■□□□□ 0.11
LRFN3-204ENST00000588831 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
LRFN3-204ENST00000588831 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
LRFN3-204ENST00000588831 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
LRFN3-204ENST00000588831 ANKRD50Q9ULJ7 1429 aa15.74■□□□□ 0.11
LRFN3-204ENST00000588831 KNSTRNQ9Y448 316 aa15.74■□□□□ 0.11
LRFN3-204ENST00000588831 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
LRFN3-204ENST00000588831 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
LRFN3-204ENST00000588831 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
LRFN3-204ENST00000588831 RRP9O43818 475 aaKnown RBP15.72■□□□□ 0.11
LRFN3-204ENST00000588831 CLUAP1Q96AJ1 413 aa15.72■□□□□ 0.11
LRFN3-204ENST00000588831 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
LRFN3-204ENST00000588831 ZHX1Q9UKY1 873 aaPredicted RBP15.71■□□□□ 0.11
LRFN3-204ENST00000588831 BBXQ8WY36 941 aaPredicted RBP15.71■□□□□ 0.11
LRFN3-204ENST00000588831 PTPRGP23470 1445 aa15.71■□□□□ 0.11
LRFN3-204ENST00000588831 BCAR3O75815 825 aa15.71■□□□□ 0.1
LRFN3-204ENST00000588831 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
LRFN3-204ENST00000588831 APAF1O14727 1248 aa15.7■□□□□ 0.1
LRFN3-204ENST00000588831 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
LRFN3-204ENST00000588831 BCORL1Q5H9F3 1711 aa15.69■□□□□ 0.1
LRFN3-204ENST00000588831 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
LRFN3-204ENST00000588831 KIAA0586Q9BVV6 1533 aa15.68■□□□□ 0.1
LRFN3-204ENST00000588831 FGD1P98174 961 aa15.67■□□□□ 0.1
LRFN3-204ENST00000588831 PZPP20742 1482 aa15.67■□□□□ 0.1
LRFN3-204ENST00000588831 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
LRFN3-204ENST00000588831 TMF1P82094 1093 aa15.67■□□□□ 0.1
LRFN3-204ENST00000588831 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
LRFN3-204ENST00000588831 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
LRFN3-204ENST00000588831 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
LRFN3-204ENST00000588831 COG6Q9Y2V7 657 aa15.66■□□□□ 0.1
LRFN3-204ENST00000588831 AAMPQ13685 434 aa15.65■□□□□ 0.1
LRFN3-204ENST00000588831 ANP32BQ92688 251 aaKnown RBP15.65■□□□□ 0.1
LRFN3-204ENST00000588831 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
LRFN3-204ENST00000588831 BRD4O60885 1362 aaPredicted RBP15.65■□□□□ 0.1
LRFN3-204ENST00000588831 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
LRFN3-204ENST00000588831 NUTM2DQ5VT03 806 aaPredicted RBP15.65■□□□□ 0.1
LRFN3-204ENST00000588831 PANK1Q8TE04 598 aa15.65■□□□□ 0.1
LRFN3-204ENST00000588831 CHMP4BQ9H444 224 aaKnown RBP15.65■□□□□ 0.1
LRFN3-204ENST00000588831 GRIN2AQ12879 1464 aa15.64■□□□□ 0.09
LRFN3-204ENST00000588831 RNF123Q5XPI4 1314 aa15.64■□□□□ 0.09
LRFN3-204ENST00000588831 TROQ12816 1431 aaPredicted RBP15.64■□□□□ 0.09
LRFN3-204ENST00000588831 SAFB2Q14151 953 aaKnown RBP eCLIP15.63■□□□□ 0.09
LRFN3-204ENST00000588831 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
LRFN3-204ENST00000588831 RRAGDQ9NQL2 400 aaPredicted RBP15.63■□□□□ 0.09
LRFN3-204ENST00000588831 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
LRFN3-204ENST00000588831 SAMD9Q5K651 1589 aa15.63■□□□□ 0.09
LRFN3-204ENST00000588831 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
LRFN3-204ENST00000588831 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
LRFN3-204ENST00000588831 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
LRFN3-204ENST00000588831 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
LRFN3-204ENST00000588831 CCDC144AA2RUR9 1427 aa15.61■□□□□ 0.09
LRFN3-204ENST00000588831 GOLGA6L3A6NEY3 463 aa15.61■□□□□ 0.09
LRFN3-204ENST00000588831 POGKQ9P215 609 aa15.6■□□□□ 0.09
LRFN3-204ENST00000588831 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
LRFN3-204ENST00000588831 PER1O15534 1290 aaPredicted RBP15.59■□□□□ 0.09
LRFN3-204ENST00000588831 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
LRFN3-204ENST00000588831 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
LRFN3-204ENST00000588831 C9orf84Q5VXU9 1444 aa15.58■□□□□ 0.09
LRFN3-204ENST00000588831 PDE3BQ13370 1112 aa15.58■□□□□ 0.08
LRFN3-204ENST00000588831 TNNQ9UQP3 1299 aa15.58■□□□□ 0.08
LRFN3-204ENST00000588831 GCC2Q8IWJ2 1684 aa15.58■□□□□ 0.08
LRFN3-204ENST00000588831 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
LRFN3-204ENST00000588831 AFAP1Q8N556 730 aa15.57■□□□□ 0.08
LRFN3-204ENST00000588831 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
LRFN3-204ENST00000588831 GPATCH8Q9UKJ3 1502 aaKnown RBP15.57■□□□□ 0.08
LRFN3-204ENST00000588831 WASHC2CQ9Y4E1 1318 aa15.57■□□□□ 0.08
LRFN3-204ENST00000588831 FAM161AQ3B820 660 aa15.57■□□□□ 0.08
LRFN3-204ENST00000588831 EFCAB2Q5VUJ9 269 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms