RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
SPIDR-228ENST00000588781 PLXNC1O60486 1568 aa9.81□□□□□ -0.84
SPIDR-228ENST00000588781 SAMD9LQ8IVG5 1584 aa9.81□□□□□ -0.84
SPIDR-228ENST00000588781 LMTK3Q96Q04 1460 aa9.81□□□□□ -0.84
SPIDR-228ENST00000588781 PRKRIP1Q9H875 184 aaPredicted RBP9.81□□□□□ -0.84
SPIDR-228ENST00000588781 MYO5CQ9NQX4 1742 aa9.81□□□□□ -0.84
SPIDR-228ENST00000588781 UNC13BO14795 1591 aa9.8□□□□□ -0.84
SPIDR-228ENST00000588781 CDC42BPBQ9Y5S2 1711 aa9.8□□□□□ -0.84
SPIDR-228ENST00000588781 KDM5CP41229 1560 aa9.8□□□□□ -0.84
SPIDR-228ENST00000588781 DUOX2Q9NRD8 1548 aa9.79□□□□□ -0.84
SPIDR-228ENST00000588781 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
SPIDR-228ENST00000588781 FAM135AQ9P2D6 1515 aa9.78□□□□□ -0.84
SPIDR-228ENST00000588781 MRS2Q9HD23 443 aa9.78□□□□□ -0.84
SPIDR-228ENST00000588781 CCDC144AA2RUR9 1427 aa9.78□□□□□ -0.84
SPIDR-228ENST00000588781 ERBINQ96RT1 1412 aa9.78□□□□□ -0.84
SPIDR-228ENST00000588781 ZBED9Q6R2W3 1325 aa9.78□□□□□ -0.84
SPIDR-228ENST00000588781 MAP3K4Q9Y6R4 1608 aa9.78□□□□□ -0.84
SPIDR-228ENST00000588781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.84
SPIDR-228ENST00000588781 ARAP3Q8WWN8 1544 aa9.77□□□□□ -0.84
SPIDR-228ENST00000588781 ASXL2Q76L83 1435 aa9.77□□□□□ -0.85
SPIDR-228ENST00000588781 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
SPIDR-228ENST00000588781 CARD11Q9BXL7 1154 aa9.77□□□□□ -0.85
SPIDR-228ENST00000588781 EIF2AK4Q9P2K8 1649 aaKnown RBP9.77□□□□□ -0.85
SPIDR-228ENST00000588781 SYCP2Q9BX26 1530 aa9.77□□□□□ -0.85
SPIDR-228ENST00000588781 PLCH2O75038 1416 aa9.76□□□□□ -0.85
SPIDR-228ENST00000588781 IQGAP3Q86VI3 1631 aa9.76□□□□□ -0.85
SPIDR-228ENST00000588781 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
SPIDR-228ENST00000588781 LAMC1P11047 1609 aa9.75□□□□□ -0.85
SPIDR-228ENST00000588781 ZNF326Q5BKZ1 582 aaKnown RBP9.75□□□□□ -0.85
SPIDR-228ENST00000588781 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
SPIDR-228ENST00000588781 ATP10AO60312 1499 aa9.74□□□□□ -0.85
SPIDR-228ENST00000588781 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
SPIDR-228ENST00000588781 SOCS7O14512 581 aa9.74□□□□□ -0.85
SPIDR-228ENST00000588781 RALBP1Q15311 655 aa9.74□□□□□ -0.85
SPIDR-228ENST00000588781 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
SPIDR-228ENST00000588781 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
SPIDR-228ENST00000588781 ZCCHC11Q5TAX3 1644 aaKnown RBP9.72□□□□□ -0.85
SPIDR-228ENST00000588781 DCAF11Q8TEB1 546 aa9.72□□□□□ -0.85
SPIDR-228ENST00000588781 TSHZ2Q9NRE2 1034 aa9.72□□□□□ -0.85
SPIDR-228ENST00000588781 DHX29Q7Z478 1369 aaKnown RBP9.72□□□□□ -0.85
SPIDR-228ENST00000588781 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
SPIDR-228ENST00000588781 ABCC1P33527 1531 aa9.72□□□□□ -0.85
SPIDR-228ENST00000588781 ILDR2Q71H61 639 aa9.71□□□□□ -0.86
SPIDR-228ENST00000588781 FAM9BQ8IZU0 186 aa9.71□□□□□ -0.86
SPIDR-228ENST00000588781 BCANQ96GW7 911 aa9.71□□□□□ -0.86
SPIDR-228ENST00000588781 WASHC2CQ9Y4E1 1318 aa9.71□□□□□ -0.86
SPIDR-228ENST00000588781 BRD4O60885 1362 aaPredicted RBP9.71□□□□□ -0.86
SPIDR-228ENST00000588781 GPRASP1Q5JY77 1395 aa9.71□□□□□ -0.86
SPIDR-228ENST00000588781 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
SPIDR-228ENST00000588781 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
SPIDR-228ENST00000588781 KANK1Q14678 1352 aa9.7□□□□□ -0.86
SPIDR-228ENST00000588781 TRPM1Q7Z4N2 1603 aa9.7□□□□□ -0.86
SPIDR-228ENST00000588781 BCORL1Q5H9F3 1711 aa9.7□□□□□ -0.86
SPIDR-228ENST00000588781 TMC1Q8TDI8 760 aa9.69□□□□□ -0.86
SPIDR-228ENST00000588781 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
SPIDR-228ENST00000588781 POLR3GLQ9BT43 218 aa9.69□□□□□ -0.86
SPIDR-228ENST00000588781 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
SPIDR-228ENST00000588781 WDR7Q9Y4E6 1490 aa9.69□□□□□ -0.86
SPIDR-228ENST00000588781 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
SPIDR-228ENST00000588781 SPAG9O60271 1321 aaKnown RBP9.68□□□□□ -0.86
SPIDR-228ENST00000588781 INSRP06213 1382 aa9.67□□□□□ -0.86
SPIDR-228ENST00000588781 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
SPIDR-228ENST00000588781 CDCA8Q53HL2 280 aa9.67□□□□□ -0.86
SPIDR-228ENST00000588781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.67□□□□□ -0.86
SPIDR-228ENST00000588781 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
SPIDR-228ENST00000588781 PRDM15P57071 1507 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-228ENST00000588781 TMF1P82094 1093 aa9.66□□□□□ -0.86
SPIDR-228ENST00000588781 E9PCH4 1651 aa9.66□□□□□ -0.86
SPIDR-228ENST00000588781 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
SPIDR-228ENST00000588781 A2MP01023 1474 aa9.66□□□□□ -0.86
SPIDR-228ENST00000588781 PTPRMP28827 1452 aa9.66□□□□□ -0.86
SPIDR-228ENST00000588781 NUDCQ9Y266 331 aa9.65□□□□□ -0.86
SPIDR-228ENST00000588781 NEURL4Q96JN8 1562 aa9.65□□□□□ -0.86
SPIDR-228ENST00000588781 NLRP13Q86W25 1043 aa9.64□□□□□ -0.87
SPIDR-228ENST00000588781 TRPM2O94759 1503 aa9.64□□□□□ -0.87
SPIDR-228ENST00000588781 PLA2R1Q13018 1463 aa9.64□□□□□ -0.87
SPIDR-228ENST00000588781 DISP3Q9P2K9 1392 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 ZFYVE16Q7Z3T8 1539 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 TET3O43151 1660 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 ABCA9Q8IUA7 1624 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 CFAP74Q9C0B2 1584 aa9.63□□□□□ -0.87
SPIDR-228ENST00000588781 EIF3AQ14152 1382 aaKnown RBP9.63□□□□□ -0.87
SPIDR-228ENST00000588781 PNISRQ8TF01 805 aaKnown RBP9.62□□□□□ -0.87
SPIDR-228ENST00000588781 DEPDC5O75140 1603 aa9.62□□□□□ -0.87
SPIDR-228ENST00000588781 RNF17Q9BXT8 1623 aaKnown RBP9.62□□□□□ -0.87
SPIDR-228ENST00000588781 PTPRTO14522 1441 aa9.62□□□□□ -0.87
SPIDR-228ENST00000588781 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
SPIDR-228ENST00000588781 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
SPIDR-228ENST00000588781 LRPPRCP42704 1394 aaKnown RBP9.62□□□□□ -0.87
SPIDR-228ENST00000588781 ATP7AQ04656 1500 aa9.61□□□□□ -0.87
SPIDR-228ENST00000588781 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
SPIDR-228ENST00000588781 CERKQ8TCT0 537 aa9.61□□□□□ -0.87
SPIDR-228ENST00000588781 INO80Q9ULG1 1556 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-228ENST00000588781 PARD3Q8TEW0 1356 aa9.61□□□□□ -0.87
SPIDR-228ENST00000588781 FANCAO15360 1455 aa9.6□□□□□ -0.87
SPIDR-228ENST00000588781 CEP152O94986 1710 aa9.6□□□□□ -0.87
SPIDR-228ENST00000588781 SPHKAPQ2M3C7 1700 aa9.6□□□□□ -0.87
SPIDR-228ENST00000588781 KIAA1210Q9ULL0 1709 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms