RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 GOLGA6L1Q8N7Z2 621 aa9.74□□□□□ -0.85
LAMA3-210ENST00000588770 DDX11L8A8MPP1 907 aa9.74□□□□□ -0.85
LAMA3-210ENST00000588770 GOLIM4O00461 696 aa9.74□□□□□ -0.85
LAMA3-210ENST00000588770 SSR1P43307 286 aaKnown RBP9.74□□□□□ -0.85
LAMA3-210ENST00000588770 CEP162Q5TB80 1403 aa9.73□□□□□ -0.85
LAMA3-210ENST00000588770 TRAK2O60296 914 aa9.73□□□□□ -0.85
LAMA3-210ENST00000588770 NUDCQ9Y266 331 aa9.73□□□□□ -0.85
LAMA3-210ENST00000588770 ZBED9Q6R2W3 1325 aa9.73□□□□□ -0.85
LAMA3-210ENST00000588770 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.73□□□□□ -0.85
LAMA3-210ENST00000588770 IGSF3O75054 1194 aa9.72□□□□□ -0.85
LAMA3-210ENST00000588770 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
LAMA3-210ENST00000588770 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
LAMA3-210ENST00000588770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
LAMA3-210ENST00000588770 MEX3CQ5U5Q3 659 aaKnown RBP9.72□□□□□ -0.85
LAMA3-210ENST00000588770 ZBTB9Q96C00 473 aa9.72□□□□□ -0.85
LAMA3-210ENST00000588770 TNNT1P13805 278 aa9.71□□□□□ -0.85
LAMA3-210ENST00000588770 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.85
LAMA3-210ENST00000588770 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.85
LAMA3-210ENST00000588770 RIPK4P57078 832 aa9.71□□□□□ -0.85
LAMA3-210ENST00000588770 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.85
LAMA3-210ENST00000588770 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.85
LAMA3-210ENST00000588770 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
LAMA3-210ENST00000588770 HSP90AB3PQ58FF7 597 aa9.71□□□□□ -0.86
LAMA3-210ENST00000588770 MYCBPQ99417 103 aaPredicted RBP9.71□□□□□ -0.86
LAMA3-210ENST00000588770 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
LAMA3-210ENST00000588770 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
LAMA3-210ENST00000588770 PDCL2Q8N4E4 241 aa9.7□□□□□ -0.86
LAMA3-210ENST00000588770 NASPP49321 788 aaPredicted RBP9.7□□□□□ -0.86
LAMA3-210ENST00000588770 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
LAMA3-210ENST00000588770 TDO2P48775 406 aa9.69□□□□□ -0.86
LAMA3-210ENST00000588770 SETQ01105 290 aaPredicted RBP9.69□□□□□ -0.86
LAMA3-210ENST00000588770 ERICH4A6NGS2 130 aa9.68□□□□□ -0.86
LAMA3-210ENST00000588770 NGEFQ8N5V2 710 aa9.68□□□□□ -0.86
LAMA3-210ENST00000588770 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
LAMA3-210ENST00000588770 GBP4Q96PP9 640 aa9.68□□□□□ -0.86
LAMA3-210ENST00000588770 FAM43BQ6ZT52 329 aaPredicted RBP9.68□□□□□ -0.86
LAMA3-210ENST00000588770 GEMIN8Q9NWZ8 242 aaKnown RBP9.68□□□□□ -0.86
LAMA3-210ENST00000588770 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
LAMA3-210ENST00000588770 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
LAMA3-210ENST00000588770 LOC102724159A0A0B4J2E5 919 aa9.67□□□□□ -0.86
LAMA3-210ENST00000588770 PWP2Q15269 919 aaKnown RBP9.67□□□□□ -0.86
LAMA3-210ENST00000588770 CTR9Q6PD62 1173 aa9.67□□□□□ -0.86
LAMA3-210ENST00000588770 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
LAMA3-210ENST00000588770 SKOR2Q2VWA4 1001 aaPredicted RBP9.67□□□□□ -0.86
LAMA3-210ENST00000588770 DHX57Q6P158 1386 aaKnown RBP9.66□□□□□ -0.86
LAMA3-210ENST00000588770 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
LAMA3-210ENST00000588770 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
LAMA3-210ENST00000588770 MCM4P33991 863 aa9.66□□□□□ -0.86
LAMA3-210ENST00000588770 YY1AP1Q9H869 796 aa9.66□□□□□ -0.86
LAMA3-210ENST00000588770 DEF6Q9H4E7 631 aa9.66□□□□□ -0.86
LAMA3-210ENST00000588770 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
LAMA3-210ENST00000588770 RBM28Q9NW13 759 aaKnown RBP9.65□□□□□ -0.86
LAMA3-210ENST00000588770 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
LAMA3-210ENST00000588770 NOM1Q5C9Z4 860 aaKnown RBP9.64□□□□□ -0.87
LAMA3-210ENST00000588770 CEP120Q8N960 986 aa9.64□□□□□ -0.87
LAMA3-210ENST00000588770 MMP14P50281 582 aa9.63□□□□□ -0.87
LAMA3-210ENST00000588770 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
LAMA3-210ENST00000588770 CHMP5Q9NZZ3 219 aa9.63□□□□□ -0.87
LAMA3-210ENST00000588770 WRNQ14191 1432 aaPredicted RBP eCLIP9.63□□□□□ -0.87
LAMA3-210ENST00000588770 TOMM22Q9NS69 142 aa9.63□□□□□ -0.87
LAMA3-210ENST00000588770 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
LAMA3-210ENST00000588770 SLC20A2Q08357 652 aa9.62□□□□□ -0.87
LAMA3-210ENST00000588770 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
LAMA3-210ENST00000588770 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
LAMA3-210ENST00000588770 GABPB1Q06547 395 aaPredicted RBP9.61□□□□□ -0.87
LAMA3-210ENST00000588770 ANAPC15P60006 121 aa9.61□□□□□ -0.87
LAMA3-210ENST00000588770 AKNAQ7Z591 1439 aa9.61□□□□□ -0.87
LAMA3-210ENST00000588770 FSD2A1L4K1 749 aa9.61□□□□□ -0.87
LAMA3-210ENST00000588770 MNS1Q8NEH6 495 aa9.61□□□□□ -0.87
LAMA3-210ENST00000588770 MPHOSPH10O00566 681 aaKnown RBP9.61□□□□□ -0.87
LAMA3-210ENST00000588770 CEP83Q9Y592 693 aa9.61□□□□□ -0.87
LAMA3-210ENST00000588770 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 DIAPH3Q9NSV4 1193 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 MRVI1Q9Y6F6 885 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
LAMA3-210ENST00000588770 HSCBQ8IWL3 235 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 RSPH14Q9UHP6 348 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 RRP1P56182 461 aaKnown RBP9.6□□□□□ -0.87
LAMA3-210ENST00000588770 RASSF4Q9H2L5 321 aa9.6□□□□□ -0.87
LAMA3-210ENST00000588770 MPNDQ8N594 471 aa9.59□□□□□ -0.87
LAMA3-210ENST00000588770 CWC15Q9P013 229 aaKnown RBP9.59□□□□□ -0.87
LAMA3-210ENST00000588770 RCAN3Q9UKA8 241 aa9.59□□□□□ -0.87
LAMA3-210ENST00000588770 SATB1Q01826 763 aa9.59□□□□□ -0.87
LAMA3-210ENST00000588770 TEX35Q5T0J7 233 aa9.59□□□□□ -0.87
LAMA3-210ENST00000588770 PRIMPOLQ96LW4 560 aa9.59□□□□□ -0.87
LAMA3-210ENST00000588770 TMX1Q9H3N1 280 aa9.59□□□□□ -0.87
LAMA3-210ENST00000588770 MCM5P33992 734 aa9.58□□□□□ -0.88
LAMA3-210ENST00000588770 FEZ1Q99689 392 aa9.58□□□□□ -0.88
LAMA3-210ENST00000588770 PAIP2Q9BPZ3 127 aaKnown RBP9.58□□□□□ -0.88
LAMA3-210ENST00000588770 MFAP1P55081 439 aaKnown RBP9.58□□□□□ -0.88
LAMA3-210ENST00000588770 CLIP1P30622 1438 aa9.58□□□□□ -0.88
LAMA3-210ENST00000588770 CCDC172P0C7W6 258 aa9.58□□□□□ -0.88
LAMA3-210ENST00000588770 HSP90AB1P08238 724 aaKnown RBP9.57□□□□□ -0.88
LAMA3-210ENST00000588770 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
LAMA3-210ENST00000588770 PSEN1P49768 467 aa9.57□□□□□ -0.88
LAMA3-210ENST00000588770 WDR43Q15061 677 aaKnown RBP eCLIP9.56□□□□□ -0.88
LAMA3-210ENST00000588770 LRCH2Q5VUJ6 765 aa9.56□□□□□ -0.88
LAMA3-210ENST00000588770 EP400NLQ6ZTU2 488 aa9.56□□□□□ -0.88
LAMA3-210ENST00000588770 DDX49Q9Y6V7 483 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms