RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
LSM14A-206ENST00000588582 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
LSM14A-206ENST00000588582 BCAR3O75815 825 aa13.18□□□□□ -0.3
LSM14A-206ENST00000588582 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
LSM14A-206ENST00000588582 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
LSM14A-206ENST00000588582 E9PSI1 815 aa13.17□□□□□ -0.3
LSM14A-206ENST00000588582 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
LSM14A-206ENST00000588582 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
LSM14A-206ENST00000588582 ERBB4Q15303 1308 aa13.17□□□□□ -0.3
LSM14A-206ENST00000588582 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
LSM14A-206ENST00000588582 USP47Q96K76 1375 aa13.16□□□□□ -0.3
LSM14A-206ENST00000588582 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
LSM14A-206ENST00000588582 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
LSM14A-206ENST00000588582 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
LSM14A-206ENST00000588582 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
LSM14A-206ENST00000588582 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
LSM14A-206ENST00000588582 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
LSM14A-206ENST00000588582 CAVIN1Q6NZI2 390 aaKnown RBP13.15□□□□□ -0.3
LSM14A-206ENST00000588582 CCDC173Q0VFZ6 552 aa13.14□□□□□ -0.31
LSM14A-206ENST00000588582 KIF27Q86VH2 1401 aa13.14□□□□□ -0.31
LSM14A-206ENST00000588582 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
LSM14A-206ENST00000588582 KNSTRNQ9Y448 316 aa13.14□□□□□ -0.31
LSM14A-206ENST00000588582 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
LSM14A-206ENST00000588582 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
LSM14A-206ENST00000588582 AEBP1Q8IUX7 1158 aa13.13□□□□□ -0.31
LSM14A-206ENST00000588582 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
LSM14A-206ENST00000588582 MCTP1Q6DN14 999 aa13.12□□□□□ -0.31
LSM14A-206ENST00000588582 TSC1Q92574 1164 aa13.12□□□□□ -0.31
LSM14A-206ENST00000588582 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
LSM14A-206ENST00000588582 CHAF1AQ13111 956 aaPredicted RBP13.11□□□□□ -0.31
LSM14A-206ENST00000588582 IGHDP01880 384 aa13.11□□□□□ -0.31
LSM14A-206ENST00000588582 TNNT3P45378 269 aaPredicted RBP13.11□□□□□ -0.31
LSM14A-206ENST00000588582 APAF1O14727 1248 aa13.1□□□□□ -0.31
LSM14A-206ENST00000588582 RRP7AQ9Y3A4 280 aaKnown RBP13.1□□□□□ -0.31
LSM14A-206ENST00000588582 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
LSM14A-206ENST00000588582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.315e-8■■□□□ 12.4
LSM14A-206ENST00000588582 PKD2Q13563 968 aa13.09□□□□□ -0.31
LSM14A-206ENST00000588582 MTERF4Q7Z6M4 381 aaKnown RBP13.09□□□□□ -0.31
LSM14A-206ENST00000588582 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
LSM14A-206ENST00000588582 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
LSM14A-206ENST00000588582 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.31
LSM14A-206ENST00000588582 PANK3Q9H999 370 aa13.08□□□□□ -0.32
LSM14A-206ENST00000588582 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
LSM14A-206ENST00000588582 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
LSM14A-206ENST00000588582 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
LSM14A-206ENST00000588582 OFD1O75665 1012 aa13.07□□□□□ -0.32
LSM14A-206ENST00000588582 CSPP1Q1MSJ5 1256 aa13.07□□□□□ -0.32
LSM14A-206ENST00000588582 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
LSM14A-206ENST00000588582 CUX2O14529 1486 aa13.07□□□□□ -0.32
LSM14A-206ENST00000588582 GAS2L3Q86XJ1 694 aa13.07□□□□□ -0.32
LSM14A-206ENST00000588582 NOL8Q76FK4 1167 aaKnown RBP13.07□□□□□ -0.32
LSM14A-206ENST00000588582 TNPO1Q92973 898 aaKnown RBP13.07□□□□□ -0.32
LSM14A-206ENST00000588582 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
LSM14A-206ENST00000588582 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
LSM14A-206ENST00000588582 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
LSM14A-206ENST00000588582 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
LSM14A-206ENST00000588582 SMAP1Q8IYB5 467 aaPredicted RBP13.05□□□□□ -0.32
LSM14A-206ENST00000588582 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
LSM14A-206ENST00000588582 SYNJ1O43426 1573 aa13.04□□□□□ -0.32
LSM14A-206ENST00000588582 ERICH4A6NGS2 130 aa13.04□□□□□ -0.32
LSM14A-206ENST00000588582 APBB1O00213 710 aa13.03□□□□□ -0.32
LSM14A-206ENST00000588582 CGNL1Q0VF96 1302 aa13.03□□□□□ -0.32
LSM14A-206ENST00000588582 FSD2A1L4K1 749 aa13.03□□□□□ -0.32
LSM14A-206ENST00000588582 RIPK4P57078 832 aa13.03□□□□□ -0.32
LSM14A-206ENST00000588582 PRPF40AO75400 957 aaKnown RBP13.02□□□□□ -0.33
LSM14A-206ENST00000588582 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
LSM14A-206ENST00000588582 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
LSM14A-206ENST00000588582 SSFA2P28290 1259 aa13.01□□□□□ -0.33
LSM14A-206ENST00000588582 KCNJ4P48050 445 aa13.01□□□□□ -0.33
LSM14A-206ENST00000588582 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
LSM14A-206ENST00000588582 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
LSM14A-206ENST00000588582 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
LSM14A-206ENST00000588582 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
LSM14A-206ENST00000588582 ZNF830Q96NB3 372 aaPredicted RBP13.01□□□□□ -0.33
LSM14A-206ENST00000588582 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
LSM14A-206ENST00000588582 ROCK2O75116 1388 aaKnown RBP13□□□□□ -0.33
LSM14A-206ENST00000588582 FGD6Q6ZV73 1430 aa13□□□□□ -0.33
LSM14A-206ENST00000588582 PTMSP20962 102 aa13□□□□□ -0.33
LSM14A-206ENST00000588582 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
LSM14A-206ENST00000588582 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■■■□ 23.4
LSM14A-206ENST00000588582 DYNC1I1O14576 645 aa13□□□□□ -0.33
LSM14A-206ENST00000588582 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
LSM14A-206ENST00000588582 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
LSM14A-206ENST00000588582 ZBTB22O15209 634 aa12.99□□□□□ -0.33
LSM14A-206ENST00000588582 DRC7Q8IY82 874 aa12.99□□□□□ -0.33
LSM14A-206ENST00000588582 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
LSM14A-206ENST00000588582 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
LSM14A-206ENST00000588582 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
LSM14A-206ENST00000588582 CCDC39Q9UFE4 941 aa12.99□□□□□ -0.33
LSM14A-206ENST00000588582 CCDC94Q9BW85 323 aaPredicted RBP12.98□□□□□ -0.33
LSM14A-206ENST00000588582 CERS3Q8IU89 383 aa12.98□□□□□ -0.33
LSM14A-206ENST00000588582 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
LSM14A-206ENST00000588582 SYCE3A1L190 88 aa12.97□□□□□ -0.33
LSM14A-206ENST00000588582 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
LSM14A-206ENST00000588582 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
LSM14A-206ENST00000588582 NPHP1O15259 732 aa12.96□□□□□ -0.34
LSM14A-206ENST00000588582 KIF3AQ9Y496 699 aa12.96□□□□□ -0.34
LSM14A-206ENST00000588582 TMF1P82094 1093 aa12.95□□□□□ -0.34
LSM14A-206ENST00000588582 DUSP27Q5VZP5 1158 aa12.95□□□□□ -0.34
LSM14A-206ENST00000588582 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms