RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 FKBP8Q14318 412 aa11.49□□□□□ -0.57
LAMA3-209ENST00000588164 SYNMO15061 1565 aa11.48□□□□□ -0.57
LAMA3-209ENST00000588164 VWDEQ8N2E2 1590 aa11.48□□□□□ -0.57
LAMA3-209ENST00000588164 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
LAMA3-209ENST00000588164 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
LAMA3-209ENST00000588164 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.57
LAMA3-209ENST00000588164 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
LAMA3-209ENST00000588164 PLXNC1O60486 1568 aa11.45□□□□□ -0.58
LAMA3-209ENST00000588164 DEPDC5O75140 1603 aa11.45□□□□□ -0.58
LAMA3-209ENST00000588164 CLIP1P30622 1438 aa11.43□□□□□ -0.58
LAMA3-209ENST00000588164 TROQ12816 1431 aaPredicted RBP11.43□□□□□ -0.58
LAMA3-209ENST00000588164 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
LAMA3-209ENST00000588164 SETD1AO15047 1707 aaKnown RBP11.42□□□□□ -0.58
LAMA3-209ENST00000588164 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
LAMA3-209ENST00000588164 MED14O60244 1454 aa11.41□□□□□ -0.58
LAMA3-209ENST00000588164 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
LAMA3-209ENST00000588164 IQGAP1P46940 1657 aa11.4□□□□□ -0.58
LAMA3-209ENST00000588164 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
LAMA3-209ENST00000588164 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
LAMA3-209ENST00000588164 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
LAMA3-209ENST00000588164 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
LAMA3-209ENST00000588164 LRRC7Q96NW7 1537 aa11.38□□□□□ -0.59
LAMA3-209ENST00000588164 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
LAMA3-209ENST00000588164 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
LAMA3-209ENST00000588164 ATP7AQ04656 1500 aa11.37□□□□□ -0.59
LAMA3-209ENST00000588164 ARXQ96QS3 562 aa11.36□□□□□ -0.59
LAMA3-209ENST00000588164 SRCAPQ6ZRS2 3230 aa11.36□□□□□ -0.59
LAMA3-209ENST00000588164 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
LAMA3-209ENST00000588164 A2MP01023 1474 aa11.35□□□□□ -0.59
LAMA3-209ENST00000588164 XIRP1Q702N8 1843 aaKnown RBP11.35□□□□□ -0.59
LAMA3-209ENST00000588164 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
LAMA3-209ENST00000588164 ANKLE2Q86XL3 938 aa11.33□□□□□ -0.6
LAMA3-209ENST00000588164 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
LAMA3-209ENST00000588164 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
LAMA3-209ENST00000588164 SYCP2Q9BX26 1530 aa11.32□□□□□ -0.6
LAMA3-209ENST00000588164 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
LAMA3-209ENST00000588164 EEA1Q15075 1411 aa11.32□□□□□ -0.6
LAMA3-209ENST00000588164 PZPP20742 1482 aa11.32□□□□□ -0.6
LAMA3-209ENST00000588164 TNRQ92752 1358 aa11.31□□□□□ -0.6
LAMA3-209ENST00000588164 UGGT1Q9NYU2 1555 aa11.31□□□□□ -0.6
LAMA3-209ENST00000588164 SPAG9O60271 1321 aaKnown RBP11.31□□□□□ -0.6
LAMA3-209ENST00000588164 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
LAMA3-209ENST00000588164 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
LAMA3-209ENST00000588164 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
LAMA3-209ENST00000588164 THEMISQ8N1K5 641 aaPredicted RBP11.29□□□□□ -0.6
LAMA3-209ENST00000588164 PLEKHH2Q8IVE3 1493 aa11.29□□□□□ -0.6
LAMA3-209ENST00000588164 KDM5DQ9BY66 1539 aa11.29□□□□□ -0.6
LAMA3-209ENST00000588164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
LAMA3-209ENST00000588164 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
LAMA3-209ENST00000588164 CCDC18Q5T9S5 1454 aa11.27□□□□□ -0.6
LAMA3-209ENST00000588164 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
LAMA3-209ENST00000588164 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.61
LAMA3-209ENST00000588164 GGT6Q6P531 493 aa11.26□□□□□ -0.61
LAMA3-209ENST00000588164 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
LAMA3-209ENST00000588164 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
LAMA3-209ENST00000588164 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
LAMA3-209ENST00000588164 ARHGAP35Q9NRY4 1499 aa11.24□□□□□ -0.61
LAMA3-209ENST00000588164 VSIG10Q8N0Z9 540 aa11.23□□□□□ -0.61
LAMA3-209ENST00000588164 ATP1B4Q9UN42 357 aaPredicted RBP11.23□□□□□ -0.61
LAMA3-209ENST00000588164 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
LAMA3-209ENST00000588164 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
LAMA3-209ENST00000588164 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.61
LAMA3-209ENST00000588164 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
LAMA3-209ENST00000588164 RTEL1-TNFRSF6BF6WH68 1400 aa11.2□□□□□ -0.62
LAMA3-209ENST00000588164 SCAF11Q99590 1463 aaKnown RBP11.19□□□□□ -0.62
LAMA3-209ENST00000588164 JCADQ9P266 1359 aa11.19□□□□□ -0.62
LAMA3-209ENST00000588164 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
LAMA3-209ENST00000588164 DHX29Q7Z478 1369 aaKnown RBP11.18□□□□□ -0.62
LAMA3-209ENST00000588164 SLIT1O75093 1534 aa11.18□□□□□ -0.62
LAMA3-209ENST00000588164 HNRNPMP52272 730 aaKnown RBP eCLIP11.17□□□□□ -0.62
LAMA3-209ENST00000588164 ZNF772Q68DY9 489 aaPredicted RBP11.17□□□□□ -0.62
LAMA3-209ENST00000588164 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
LAMA3-209ENST00000588164 CASKIN1Q8WXD9 1431 aa11.17□□□□□ -0.62
LAMA3-209ENST00000588164 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
LAMA3-209ENST00000588164 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
LAMA3-209ENST00000588164 ARHGAP23Q9P227 1491 aa11.16□□□□□ -0.62
LAMA3-209ENST00000588164 SHPRHQ149N8 1683 aa11.16□□□□□ -0.62
LAMA3-209ENST00000588164 FGD6Q6ZV73 1430 aa11.15□□□□□ -0.62
LAMA3-209ENST00000588164 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
LAMA3-209ENST00000588164 ABCC3O15438 1527 aa11.14□□□□□ -0.63
LAMA3-209ENST00000588164 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
LAMA3-209ENST00000588164 LRP6O75581 1613 aa11.13□□□□□ -0.63
LAMA3-209ENST00000588164 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
LAMA3-209ENST00000588164 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
LAMA3-209ENST00000588164 WASHC2CQ9Y4E1 1318 aa11.13□□□□□ -0.63
LAMA3-209ENST00000588164 TULP1O00294 542 aaPredicted RBP11.13□□□□□ -0.63
LAMA3-209ENST00000588164 KDM5AP29375 1690 aaKnown RBP11.13□□□□□ -0.63
LAMA3-209ENST00000588164 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
LAMA3-209ENST00000588164 ERVK-7P63135 1459 aa11.12□□□□□ -0.63
LAMA3-209ENST00000588164 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
LAMA3-209ENST00000588164 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
LAMA3-209ENST00000588164 PRDM15P57071 1507 aaPredicted RBP11.12□□□□□ -0.63
LAMA3-209ENST00000588164 TMEM94Q12767 1356 aa11.12□□□□□ -0.63
LAMA3-209ENST00000588164 CFDP1Q9UEE9 299 aaPredicted RBP11.11□□□□□ -0.63
LAMA3-209ENST00000588164 NCOA2Q15596 1464 aa11.11□□□□□ -0.63
LAMA3-209ENST00000588164 KIF3BO15066 747 aa11.1□□□□□ -0.63
LAMA3-209ENST00000588164 RXRBP28702 533 aa11.1□□□□□ -0.63
LAMA3-209ENST00000588164 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
LAMA3-209ENST00000588164 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
LAMA3-209ENST00000588164 EIF2AK4Q9P2K8 1649 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms