RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
RUNDC3A-203ENST00000587483 KIF15Q9NS87 1388 aa14.84□□□□□ -0.03
RUNDC3A-203ENST00000587483 DAXXQ9UER7 740 aaPredicted RBP14.84□□□□□ -0.03
RUNDC3A-203ENST00000587483 UHRF1BP1Q6BDS2 1440 aa14.84□□□□□ -0.03
RUNDC3A-203ENST00000587483 PLEKHD1A6NEE1 506 aa14.84□□□□□ -0.03
RUNDC3A-203ENST00000587483 ADCY10Q96PN6 1610 aa14.82□□□□□ -0.04
RUNDC3A-203ENST00000587483 EIF4G3O43432 1585 aaKnown RBP14.82□□□□□ -0.04
RUNDC3A-203ENST00000587483 CDCA7LQ96GN5 454 aa14.81□□□□□ -0.04
RUNDC3A-203ENST00000587483 MYBBP1AQ9BQG0 1328 aaKnown RBP14.81□□□□□ -0.04
RUNDC3A-203ENST00000587483 LRPPRCP42704 1394 aaKnown RBP14.81□□□□□ -0.04
RUNDC3A-203ENST00000587483 C9orf84Q5VXU9 1444 aa14.8□□□□□ -0.04
RUNDC3A-203ENST00000587483 IPO9Q96P70 1041 aaKnown RBP14.8□□□□□ -0.04
RUNDC3A-203ENST00000587483 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
RUNDC3A-203ENST00000587483 JPH4Q96JJ6 628 aa14.8□□□□□ -0.04
RUNDC3A-203ENST00000587483 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
RUNDC3A-203ENST00000587483 ARHGEF12Q9NZN5 1544 aa14.79□□□□□ -0.04
RUNDC3A-203ENST00000587483 CEP170Q5SW79 1584 aa14.79□□□□□ -0.04
RUNDC3A-203ENST00000587483 RCAN3Q9UKA8 241 aa14.79□□□□□ -0.04
RUNDC3A-203ENST00000587483 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
RUNDC3A-203ENST00000587483 RALBP1Q15311 655 aa14.78□□□□□ -0.04
RUNDC3A-203ENST00000587483 SLC4A3P48751 1232 aa14.77□□□□□ -0.04
RUNDC3A-203ENST00000587483 E9PCH4 1651 aa14.75□□□□□ -0.05
RUNDC3A-203ENST00000587483 NEFMP07197 916 aa14.75□□□□□ -0.05
RUNDC3A-203ENST00000587483 NBPF1Q3BBV0 1214 aa14.75□□□□□ -0.05
RUNDC3A-203ENST00000587483 SHANK2Q9UPX8 1470 aa14.74□□□□□ -0.05
RUNDC3A-203ENST00000587483 CARMIL2Q6F5E8 1435 aa14.74□□□□□ -0.05
RUNDC3A-203ENST00000587483 RGS3P49796 1198 aa14.73□□□□□ -0.05
RUNDC3A-203ENST00000587483 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
RUNDC3A-203ENST00000587483 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
RUNDC3A-203ENST00000587483 KDM5DQ9BY66 1539 aa14.73□□□□□ -0.05
RUNDC3A-203ENST00000587483 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
RUNDC3A-203ENST00000587483 NLRP13Q86W25 1043 aa14.72□□□□□ -0.05
RUNDC3A-203ENST00000587483 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
RUNDC3A-203ENST00000587483 ATP10BO94823 1461 aa14.71□□□□□ -0.06
RUNDC3A-203ENST00000587483 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
RUNDC3A-203ENST00000587483 PTPRGP23470 1445 aa14.7□□□□□ -0.06
RUNDC3A-203ENST00000587483 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
RUNDC3A-203ENST00000587483 PANK3Q9H999 370 aa14.69□□□□□ -0.06
RUNDC3A-203ENST00000587483 ABCA8O94911 1581 aa14.69□□□□□ -0.06
RUNDC3A-203ENST00000587483 NEUROD2Q15784 382 aa14.69□□□□□ -0.06
RUNDC3A-203ENST00000587483 PDE4AP27815 886 aa14.69□□□□□ -0.06
RUNDC3A-203ENST00000587483 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
RUNDC3A-203ENST00000587483 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
RUNDC3A-203ENST00000587483 TRPM1Q7Z4N2 1603 aa14.68□□□□□ -0.06
RUNDC3A-203ENST00000587483 PRAG1Q86YV5 1406 aa14.68□□□□□ -0.06
RUNDC3A-203ENST00000587483 TNNT2P45379 298 aaPredicted RBP14.68□□□□□ -0.06
RUNDC3A-203ENST00000587483 ARXQ96QS3 562 aa14.68□□□□□ -0.06
RUNDC3A-203ENST00000587483 CRBNQ96SW2 442 aa14.68□□□□□ -0.06
RUNDC3A-203ENST00000587483 TCERG1O14776 1098 aaKnown RBP14.67□□□□□ -0.06
RUNDC3A-203ENST00000587483 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
RUNDC3A-203ENST00000587483 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
RUNDC3A-203ENST00000587483 PER1O15534 1290 aaPredicted RBP14.67□□□□□ -0.06
RUNDC3A-203ENST00000587483 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
RUNDC3A-203ENST00000587483 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
RUNDC3A-203ENST00000587483 PDE3BQ13370 1112 aa14.65□□□□□ -0.06
RUNDC3A-203ENST00000587483 NUP160Q12769 1436 aa14.65□□□□□ -0.06
RUNDC3A-203ENST00000587483 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
RUNDC3A-203ENST00000587483 ARHGEF5Q12774 1597 aa14.64□□□□□ -0.07
RUNDC3A-203ENST00000587483 CCDC141Q6ZP82 1450 aa14.63□□□□□ -0.07
RUNDC3A-203ENST00000587483 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
RUNDC3A-203ENST00000587483 SAMD9LQ8IVG5 1584 aa14.63□□□□□ -0.07
RUNDC3A-203ENST00000587483 BACH2Q9BYV9 841 aa14.63□□□□□ -0.07
RUNDC3A-203ENST00000587483 COL17A1Q9UMD9 1497 aaPredicted RBP14.62□□□□□ -0.07
RUNDC3A-203ENST00000587483 A2MP01023 1474 aa14.62□□□□□ -0.07
RUNDC3A-203ENST00000587483 C20orf194Q5TEA3 1177 aa14.62□□□□□ -0.07
RUNDC3A-203ENST00000587483 TESK2Q96S53 571 aa14.61□□□□□ -0.07
RUNDC3A-203ENST00000587483 CDC42BPBQ9Y5S2 1711 aa14.61□□□□□ -0.07
RUNDC3A-203ENST00000587483 PLA2R1Q13018 1463 aa14.61□□□□□ -0.07
RUNDC3A-203ENST00000587483 IL27Q8NEV9 243 aa14.61□□□□□ -0.07
RUNDC3A-203ENST00000587483 ADAMTS8Q9UP79 889 aa14.59□□□□□ -0.07
RUNDC3A-203ENST00000587483 BLMP54132 1417 aaPredicted RBP14.59□□□□□ -0.07
RUNDC3A-203ENST00000587483 GPRASP1Q5JY77 1395 aa14.59□□□□□ -0.07
RUNDC3A-203ENST00000587483 MS4A1P11836 297 aa14.59□□□□□ -0.07
RUNDC3A-203ENST00000587483 ERBINQ96RT1 1412 aa14.58□□□□□ -0.07
RUNDC3A-203ENST00000587483 TMF1P82094 1093 aa14.58□□□□□ -0.08
RUNDC3A-203ENST00000587483 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.08
RUNDC3A-203ENST00000587483 PRDM15P57071 1507 aaPredicted RBP14.58□□□□□ -0.08
RUNDC3A-203ENST00000587483 SYCP2Q9BX26 1530 aa14.58□□□□□ -0.08
RUNDC3A-203ENST00000587483 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
RUNDC3A-203ENST00000587483 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
RUNDC3A-203ENST00000587483 FRAT1Q92837 279 aaPredicted RBP14.57□□□□□ -0.08
RUNDC3A-203ENST00000587483 WASHC2CQ9Y4E1 1318 aa14.56□□□□□ -0.08
RUNDC3A-203ENST00000587483 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
RUNDC3A-203ENST00000587483 EIF5BO60841 1220 aaKnown RBP14.55□□□□□ -0.08
RUNDC3A-203ENST00000587483 UNC13BO14795 1591 aa14.55□□□□□ -0.08
RUNDC3A-203ENST00000587483 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
RUNDC3A-203ENST00000587483 ZMYM4Q5VZL5 1548 aa14.54□□□□□ -0.08
RUNDC3A-203ENST00000587483 RSPH4AQ5TD94 716 aa14.54□□□□□ -0.08
RUNDC3A-203ENST00000587483 LAMC1P11047 1609 aa14.54□□□□□ -0.08
RUNDC3A-203ENST00000587483 ARHGAP5Q13017 1502 aa14.54□□□□□ -0.08
RUNDC3A-203ENST00000587483 TTC37Q6PGP7 1564 aa14.52□□□□□ -0.09
RUNDC3A-203ENST00000587483 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
RUNDC3A-203ENST00000587483 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.09
RUNDC3A-203ENST00000587483 RRP7AQ9Y3A4 280 aaKnown RBP14.52□□□□□ -0.09
RUNDC3A-203ENST00000587483 EIF2AK4Q9P2K8 1649 aaKnown RBP14.51□□□□□ -0.09
RUNDC3A-203ENST00000587483 INSRP06213 1382 aa14.51□□□□□ -0.09
RUNDC3A-203ENST00000587483 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
RUNDC3A-203ENST00000587483 IQGAP3Q86VI3 1631 aa14.5□□□□□ -0.09
RUNDC3A-203ENST00000587483 PLEKHH1Q9ULM0 1364 aa14.5□□□□□ -0.09
RUNDC3A-203ENST00000587483 APAF1O14727 1248 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms