RNA–Protein interactions for RNA: ENST00000586086.1

DNMT1-206, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-206ENST00000586086 ZNF777Q9ULD5 760 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-206ENST00000586086 CLCN6P51797 869 aa11.9□□□□□ -0.5
DNMT1-206ENST00000586086 MCM6Q14566 821 aa11.9□□□□□ -0.5
DNMT1-206ENST00000586086 RBM33Q96EV2 1170 aaKnown RBP11.9□□□□□ -0.5
DNMT1-206ENST00000586086 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-206ENST00000586086 SEC24BO95487 1268 aa11.89□□□□□ -0.51
DNMT1-206ENST00000586086 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
DNMT1-206ENST00000586086 EPAS1Q99814 870 aa11.89□□□□□ -0.51
DNMT1-206ENST00000586086 TMEM92Q6UXU6 159 aa11.88□□□□□ -0.51
DNMT1-206ENST00000586086 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
DNMT1-206ENST00000586086 CDHR5Q9HBB8 845 aa11.88□□□□□ -0.51
DNMT1-206ENST00000586086 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-206ENST00000586086 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
DNMT1-206ENST00000586086 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
DNMT1-206ENST00000586086 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
DNMT1-206ENST00000586086 PHF14O94880 888 aa11.85□□□□□ -0.51
DNMT1-206ENST00000586086 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
DNMT1-206ENST00000586086 HAX1O00165 279 aa11.83□□□□□ -0.52
DNMT1-206ENST00000586086 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
DNMT1-206ENST00000586086 TMUB1Q9BVT8 246 aa11.83□□□□□ -0.52
DNMT1-206ENST00000586086 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
DNMT1-206ENST00000586086 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
DNMT1-206ENST00000586086 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
DNMT1-206ENST00000586086 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
DNMT1-206ENST00000586086 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
DNMT1-206ENST00000586086 OATP04181 439 aa11.81□□□□□ -0.52
DNMT1-206ENST00000586086 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
DNMT1-206ENST00000586086 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
DNMT1-206ENST00000586086 POM121Q96HA1 1249 aa11.79□□□□□ -0.52
DNMT1-206ENST00000586086 PHOX2BQ99453 314 aa11.79□□□□□ -0.52
DNMT1-206ENST00000586086 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
DNMT1-206ENST00000586086 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
DNMT1-206ENST00000586086 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
DNMT1-206ENST00000586086 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
DNMT1-206ENST00000586086 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
DNMT1-206ENST00000586086 PCDHGA10Q9Y5H3 936 aa11.76□□□□□ -0.53
DNMT1-206ENST00000586086 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
DNMT1-206ENST00000586086 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
DNMT1-206ENST00000586086 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
DNMT1-206ENST00000586086 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
DNMT1-206ENST00000586086 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
DNMT1-206ENST00000586086 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-206ENST00000586086 SLC34A2O95436 690 aa11.73□□□□□ -0.53
DNMT1-206ENST00000586086 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
DNMT1-206ENST00000586086 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
DNMT1-206ENST00000586086 FNBP4Q8N3X1 1017 aaPredicted RBP11.72□□□□□ -0.53
DNMT1-206ENST00000586086 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
DNMT1-206ENST00000586086 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
DNMT1-206ENST00000586086 TBC1D2Q9BYX2 928 aa11.71□□□□□ -0.53
DNMT1-206ENST00000586086 COG6Q9Y2V7 657 aa11.71□□□□□ -0.53
DNMT1-206ENST00000586086 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
DNMT1-206ENST00000586086 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
DNMT1-206ENST00000586086 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
DNMT1-206ENST00000586086 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
DNMT1-206ENST00000586086 RFC5P40937 340 aa11.69□□□□□ -0.54
DNMT1-206ENST00000586086 TMEM259Q4ZIN3 620 aa11.69□□□□□ -0.54
DNMT1-206ENST00000586086 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
DNMT1-206ENST00000586086 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
DNMT1-206ENST00000586086 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
DNMT1-206ENST00000586086 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
DNMT1-206ENST00000586086 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
DNMT1-206ENST00000586086 PRM3Q9NNZ6 103 aa11.67□□□□□ -0.54
DNMT1-206ENST00000586086 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
DNMT1-206ENST00000586086 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
DNMT1-206ENST00000586086 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
DNMT1-206ENST00000586086 TRAIPQ9BWF2 469 aa11.66□□□□□ -0.54
DNMT1-206ENST00000586086 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
DNMT1-206ENST00000586086 EVX2Q03828 476 aa11.65□□□□□ -0.54
DNMT1-206ENST00000586086 C6orf132Q5T0Z8 1188 aa11.65□□□□□ -0.54
DNMT1-206ENST00000586086 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
DNMT1-206ENST00000586086 SLC39A7Q92504 469 aa11.64□□□□□ -0.55
DNMT1-206ENST00000586086 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
DNMT1-206ENST00000586086 ACIN1Q9UKV3 1341 aaKnown RBP11.62□□□□□ -0.55
DNMT1-206ENST00000586086 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
DNMT1-206ENST00000586086 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
DNMT1-206ENST00000586086 CSPP1Q1MSJ5 1256 aa11.61□□□□□ -0.55
DNMT1-206ENST00000586086 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
DNMT1-206ENST00000586086 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
DNMT1-206ENST00000586086 ABL2P42684 1182 aa11.6□□□□□ -0.55
DNMT1-206ENST00000586086 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
DNMT1-206ENST00000586086 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
DNMT1-206ENST00000586086 LIMD1Q9UGP4 676 aa11.6□□□□□ -0.55
DNMT1-206ENST00000586086 C7P10643 843 aa11.59□□□□□ -0.55
DNMT1-206ENST00000586086 FOSBP53539 338 aa11.59□□□□□ -0.55
DNMT1-206ENST00000586086 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
DNMT1-206ENST00000586086 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
DNMT1-206ENST00000586086 PRSS12P56730 875 aa11.58□□□□□ -0.56
DNMT1-206ENST00000586086 SPIRE2Q8WWL2 714 aa11.58□□□□□ -0.56
DNMT1-206ENST00000586086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
DNMT1-206ENST00000586086 PPP2R2DQ66LE6 453 aa11.57□□□□□ -0.56
DNMT1-206ENST00000586086 RETREG2Q8NC44 543 aa11.57□□□□□ -0.56
DNMT1-206ENST00000586086 CDCA7LQ96GN5 454 aa11.56□□□□□ -0.56
DNMT1-206ENST00000586086 AP1G2O75843 785 aa11.55□□□□□ -0.56
DNMT1-206ENST00000586086 SULF1Q8IWU6 871 aa11.55□□□□□ -0.56
DNMT1-206ENST00000586086 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-206ENST00000586086 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-206ENST00000586086 GABBR2O75899 941 aa11.54□□□□□ -0.56
DNMT1-206ENST00000586086 PDE4CQ08493 712 aa11.54□□□□□ -0.56
DNMT1-206ENST00000586086 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
DNMT1-206ENST00000586086 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms