RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 KIDINS220Q9ULH0 1771 aa20.04■□□□□ 0.8
LIG3-205ENST00000585941 DHX29Q7Z478 1369 aaKnown RBP20.04■□□□□ 0.8
LIG3-205ENST00000585941 CCDC144AA2RUR9 1427 aa20.04■□□□□ 0.8
LIG3-205ENST00000585941 POGZQ7Z3K3 1410 aa20.04■□□□□ 0.8
LIG3-205ENST00000585941 MAP3K4Q9Y6R4 1608 aa20.03■□□□□ 0.8
LIG3-205ENST00000585941 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
LIG3-205ENST00000585941 KANK1Q14678 1352 aa20.02■□□□□ 0.8
LIG3-205ENST00000585941 MLH3Q9UHC1 1453 aa20.02■□□□□ 0.79
LIG3-205ENST00000585941 NBPF8Q3BBV2 869 aa20■□□□□ 0.79
LIG3-205ENST00000585941 MYT1LQ9UL68 1186 aa20■□□□□ 0.79
LIG3-205ENST00000585941 TET3O43151 1660 aa19.99■□□□□ 0.79
LIG3-205ENST00000585941 VWDEQ8N2E2 1590 aa19.99■□□□□ 0.79
LIG3-205ENST00000585941 HECW2Q9P2P5 1572 aa19.99■□□□□ 0.79
LIG3-205ENST00000585941 HSPA5P11021 654 aaKnown RBP19.98■□□□□ 0.79
LIG3-205ENST00000585941 PRDM15P57071 1507 aaPredicted RBP19.98■□□□□ 0.79
LIG3-205ENST00000585941 PLA2R1Q13018 1463 aa19.98■□□□□ 0.79
LIG3-205ENST00000585941 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
LIG3-205ENST00000585941 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
LIG3-205ENST00000585941 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
LIG3-205ENST00000585941 E9PCH4 1651 aa19.96■□□□□ 0.79
LIG3-205ENST00000585941 A2MP01023 1474 aa19.95■□□□□ 0.78
LIG3-205ENST00000585941 RALGAPBQ86X10 1494 aa19.94■□□□□ 0.78
LIG3-205ENST00000585941 RNF17Q9BXT8 1623 aaKnown RBP19.94■□□□□ 0.78
LIG3-205ENST00000585941 BCORL1Q5H9F3 1711 aa19.93■□□□□ 0.78
LIG3-205ENST00000585941 KIF3BO15066 747 aa19.93■□□□□ 0.78
LIG3-205ENST00000585941 SPATA31E1Q6ZUB1 1445 aa19.93■□□□□ 0.78
LIG3-205ENST00000585941 MROH1Q8NDA8 1641 aa19.92■□□□□ 0.78
LIG3-205ENST00000585941 POLR1AO95602 1720 aaPredicted RBP19.92■□□□□ 0.78
LIG3-205ENST00000585941 SPHKAPQ2M3C7 1700 aa19.92■□□□□ 0.78
LIG3-205ENST00000585941 DIP2BQ9P265 1576 aa19.92■□□□□ 0.78
LIG3-205ENST00000585941 TRPM2O94759 1503 aa19.91■□□□□ 0.78
LIG3-205ENST00000585941 RICTORQ6R327 1708 aa19.91■□□□□ 0.78
LIG3-205ENST00000585941 PTPRTO14522 1441 aa19.9■□□□□ 0.78
LIG3-205ENST00000585941 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
LIG3-205ENST00000585941 LMTK2Q8IWU2 1503 aa19.89■□□□□ 0.77
LIG3-205ENST00000585941 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
LIG3-205ENST00000585941 CEP152O94986 1710 aa19.87■□□□□ 0.77
LIG3-205ENST00000585941 ZNF326Q5BKZ1 582 aaKnown RBP19.86■□□□□ 0.77
LIG3-205ENST00000585941 FRMPD1Q5SYB0 1578 aa19.85■□□□□ 0.77
LIG3-205ENST00000585941 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
LIG3-205ENST00000585941 WASHC2AQ641Q2 1341 aa19.85■□□□□ 0.77
LIG3-205ENST00000585941 EFCAB6Q5THR3 1501 aa19.85■□□□□ 0.77
LIG3-205ENST00000585941 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
LIG3-205ENST00000585941 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
LIG3-205ENST00000585941 USP47Q96K76 1375 aa19.84■□□□□ 0.77
LIG3-205ENST00000585941 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
LIG3-205ENST00000585941 TRPM1Q7Z4N2 1603 aa19.83■□□□□ 0.77
LIG3-205ENST00000585941 ANP32CO43423 234 aa19.83■□□□□ 0.76
LIG3-205ENST00000585941 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.76
LIG3-205ENST00000585941 CCDC7Q96M83 1385 aa19.83■□□□□ 0.76
LIG3-205ENST00000585941 DIP2CQ9Y2E4 1556 aa19.82■□□□□ 0.76
LIG3-205ENST00000585941 ARID4BQ4LE39 1312 aaPredicted RBP19.81■□□□□ 0.76
LIG3-205ENST00000585941 ZMYM4Q5VZL5 1548 aa19.81■□□□□ 0.76
LIG3-205ENST00000585941 LAMC1P11047 1609 aa19.81■□□□□ 0.76
LIG3-205ENST00000585941 RAPGEF3O95398 923 aa19.81■□□□□ 0.76
LIG3-205ENST00000585941 CLTCL1P53675 1640 aa19.8■□□□□ 0.76
LIG3-205ENST00000585941 CARD11Q9BXL7 1154 aa19.8■□□□□ 0.76
LIG3-205ENST00000585941 PPRC1Q5VV67 1664 aaKnown RBP19.79■□□□□ 0.76
LIG3-205ENST00000585941 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
LIG3-205ENST00000585941 RGL3Q3MIN7 710 aa19.79■□□□□ 0.76
LIG3-205ENST00000585941 CNTLNQ9NXG0 1405 aa19.78■□□□□ 0.76
LIG3-205ENST00000585941 ROCK2O75116 1388 aaKnown RBP19.78■□□□□ 0.76
LIG3-205ENST00000585941 GPRASP1Q5JY77 1395 aa19.77■□□□□ 0.76
LIG3-205ENST00000585941 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
LIG3-205ENST00000585941 TSPOAP1O95153 1857 aa19.76■□□□□ 0.75
LIG3-205ENST00000585941 KIF1BO60333 1816 aa19.76■□□□□ 0.75
LIG3-205ENST00000585941 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
LIG3-205ENST00000585941 ABCC3O15438 1527 aa19.74■□□□□ 0.75
LIG3-205ENST00000585941 KIF7Q2M1P5 1343 aa19.73■□□□□ 0.75
LIG3-205ENST00000585941 C11orf95C9JLR9 678 aaPredicted RBP19.72■□□□□ 0.75
LIG3-205ENST00000585941 KIF13AQ9H1H9 1805 aa19.72■□□□□ 0.75
LIG3-205ENST00000585941 GGT6Q6P531 493 aa19.71■□□□□ 0.75
LIG3-205ENST00000585941 REREQ9P2R6 1566 aa19.71■□□□□ 0.75
LIG3-205ENST00000585941 CAMSAP1Q5T5Y3 1602 aa19.7■□□□□ 0.74
LIG3-205ENST00000585941 MADDQ8WXG6 1647 aa19.7■□□□□ 0.74
LIG3-205ENST00000585941 YEATS2Q9ULM3 1422 aa19.7■□□□□ 0.74
LIG3-205ENST00000585941 WASHC2CQ9Y4E1 1318 aa19.7■□□□□ 0.74
LIG3-205ENST00000585941 NPATQ14207 1427 aa19.68■□□□□ 0.74
LIG3-205ENST00000585941 KIAA1210Q9ULL0 1709 aa19.68■□□□□ 0.74
LIG3-205ENST00000585941 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
LIG3-205ENST00000585941 MYOM2P54296 1465 aa19.66■□□□□ 0.74
LIG3-205ENST00000585941 ST20-MTHFSA0A0A6YYL1 179 aa19.65■□□□□ 0.74
LIG3-205ENST00000585941 IFT172Q9UG01 1749 aa19.65■□□□□ 0.74
LIG3-205ENST00000585941 AGLP35573 1532 aa19.64■□□□□ 0.73
LIG3-205ENST00000585941 NBPF1Q3BBV0 1214 aa19.63■□□□□ 0.73
LIG3-205ENST00000585941 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
LIG3-205ENST00000585941 UGGT1Q9NYU2 1555 aa19.63■□□□□ 0.73
LIG3-205ENST00000585941 NOS1P29475 1434 aa19.62■□□□□ 0.73
LIG3-205ENST00000585941 PPP6R1Q9UPN7 881 aa19.62■□□□□ 0.73
LIG3-205ENST00000585941 CFAP65Q6ZU64 1925 aaKnown RBP19.61■□□□□ 0.73
LIG3-205ENST00000585941 MROH2AA6NES4 1674 aa19.6■□□□□ 0.73
LIG3-205ENST00000585941 IQGAP1P46940 1657 aa19.6■□□□□ 0.73
LIG3-205ENST00000585941 PIK3C2BO00750 1634 aa19.6■□□□□ 0.73
LIG3-205ENST00000585941 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.72
LIG3-205ENST00000585941 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
LIG3-205ENST00000585941 NRXN1Q9ULB1 1477 aa19.57■□□□□ 0.72
LIG3-205ENST00000585941 ARHGEF40Q8TER5 1519 aa19.56■□□□□ 0.72
LIG3-205ENST00000585941 SCAF11Q99590 1463 aaKnown RBP19.56■□□□□ 0.72
LIG3-205ENST00000585941 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
LIG3-205ENST00000585941 PPLO60437 1756 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms