RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 MAGI1Q96QZ7 1491 aaPredicted RBP24.71■■□□□ 1.55
PKN1-204ENST00000585839 SYNJ2O15056 1496 aa24.7■■□□□ 1.55
PKN1-204ENST00000585839 SPATA31E1Q6ZUB1 1445 aa24.69■■□□□ 1.54
PKN1-204ENST00000585839 TMF1P82094 1093 aa24.69■■□□□ 1.54
PKN1-204ENST00000585839 KIF3BO15066 747 aa24.68■■□□□ 1.54
PKN1-204ENST00000585839 SAFB2Q14151 953 aaKnown RBP eCLIP24.68■■□□□ 1.54
PKN1-204ENST00000585839 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
PKN1-204ENST00000585839 BCL11AQ9H165 835 aa24.68■■□□□ 1.54
PKN1-204ENST00000585839 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
PKN1-204ENST00000585839 DNMT1P26358 1616 aaKnown RBP24.66■■□□□ 1.54
PKN1-204ENST00000585839 CEP170Q5SW79 1584 aa24.66■■□□□ 1.54
PKN1-204ENST00000585839 RALBP1Q15311 655 aa24.65■■□□□ 1.54
PKN1-204ENST00000585839 ZBTB47Q9UFB7 747 aaPredicted RBP24.65■■□□□ 1.54
PKN1-204ENST00000585839 NOP58Q9Y2X3 529 aaKnown RBP24.65■■□□□ 1.54
PKN1-204ENST00000585839 RRP1P56182 461 aaKnown RBP24.64■■□□□ 1.53
PKN1-204ENST00000585839 ADAMTS8Q9UP79 889 aa24.62■■□□□ 1.53
PKN1-204ENST00000585839 RGS3P49796 1198 aa24.61■■□□□ 1.53
PKN1-204ENST00000585839 EFCAB2Q5VUJ9 269 aa24.61■■□□□ 1.53
PKN1-204ENST00000585839 GGT6Q6P531 493 aa24.61■■□□□ 1.53
PKN1-204ENST00000585839 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
PKN1-204ENST00000585839 CRBNQ96SW2 442 aa24.6■■□□□ 1.53
PKN1-204ENST00000585839 RTL5Q5HYW3 569 aaPredicted RBP24.6■■□□□ 1.53
PKN1-204ENST00000585839 DISP3Q9P2K9 1392 aa24.59■■□□□ 1.53
PKN1-204ENST00000585839 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
PKN1-204ENST00000585839 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.53
PKN1-204ENST00000585839 C20orf194Q5TEA3 1177 aa24.57■■□□□ 1.52
PKN1-204ENST00000585839 FANCIQ9NVI1 1328 aa24.57■■□□□ 1.52
PKN1-204ENST00000585839 SLC4A3P48751 1232 aa24.57■■□□□ 1.52
PKN1-204ENST00000585839 CANXP27824 592 aaKnown RBP24.55■■□□□ 1.52
PKN1-204ENST00000585839 ERICH6BQ5W0A0 696 aa24.55■■□□□ 1.52
PKN1-204ENST00000585839 RRP7AQ9Y3A4 280 aaKnown RBP24.55■■□□□ 1.52
PKN1-204ENST00000585839 CFAP70Q5T0N1 1121 aa24.54■■□□□ 1.52
PKN1-204ENST00000585839 SMG6Q86US8 1419 aaKnown RBP24.53■■□□□ 1.52
PKN1-204ENST00000585839 BCORL1Q5H9F3 1711 aa24.52■■□□□ 1.52
PKN1-204ENST00000585839 TRAK1Q9UPV9 953 aa24.52■■□□□ 1.52
PKN1-204ENST00000585839 DEKP35659 375 aaKnown RBP24.5■■□□□ 1.51
PKN1-204ENST00000585839 FRAT1Q92837 279 aaPredicted RBP24.48■■□□□ 1.51
PKN1-204ENST00000585839 DAXXQ9UER7 740 aaPredicted RBP24.48■■□□□ 1.51
PKN1-204ENST00000585839 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
PKN1-204ENST00000585839 APAF1O14727 1248 aa24.47■■□□□ 1.51
PKN1-204ENST00000585839 TESK2Q96S53 571 aa24.45■■□□□ 1.5
PKN1-204ENST00000585839 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
PKN1-204ENST00000585839 BRD4O60885 1362 aaPredicted RBP24.45■■□□□ 1.5
PKN1-204ENST00000585839 CCDC141Q6ZP82 1450 aa24.44■■□□□ 1.5
PKN1-204ENST00000585839 RSPH4AQ5TD94 716 aa24.44■■□□□ 1.5
PKN1-204ENST00000585839 BCL2L13Q9BXK5 485 aa24.44■■□□□ 1.5
PKN1-204ENST00000585839 STK26Q9P289 416 aa24.44■■□□□ 1.5
PKN1-204ENST00000585839 PER1O15534 1290 aaPredicted RBP24.43■■□□□ 1.5
PKN1-204ENST00000585839 PDE4AP27815 886 aa24.42■■□□□ 1.5
PKN1-204ENST00000585839 PPP2R1AP30153 589 aa24.41■■□□□ 1.5
PKN1-204ENST00000585839 NUP160Q12769 1436 aa24.4■■□□□ 1.5
PKN1-204ENST00000585839 IPO9Q96P70 1041 aaKnown RBP24.4■■□□□ 1.5
PKN1-204ENST00000585839 RALGAPBQ86X10 1494 aa24.39■■□□□ 1.5
PKN1-204ENST00000585839 RTN4Q9NQC3 1192 aaKnown RBP24.39■■□□□ 1.49
PKN1-204ENST00000585839 FAM135AQ9P2D6 1515 aa24.38■■□□□ 1.49
PKN1-204ENST00000585839 ARID4BQ4LE39 1312 aaPredicted RBP24.38■■□□□ 1.49
PKN1-204ENST00000585839 ERBINQ96RT1 1412 aa24.37■■□□□ 1.49
PKN1-204ENST00000585839 ABCC10Q5T3U5 1492 aa24.37■■□□□ 1.49
PKN1-204ENST00000585839 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
PKN1-204ENST00000585839 PRAG1Q86YV5 1406 aa24.36■■□□□ 1.49
PKN1-204ENST00000585839 CLUAP1Q96AJ1 413 aa24.35■■□□□ 1.49
PKN1-204ENST00000585839 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
PKN1-204ENST00000585839 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
PKN1-204ENST00000585839 BCAR3O75815 825 aa24.34■■□□□ 1.49
PKN1-204ENST00000585839 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
PKN1-204ENST00000585839 SCAPERQ9BY12 1400 aa24.34■■□□□ 1.49
PKN1-204ENST00000585839 TRAPPC8Q9Y2L5 1435 aa24.34■■□□□ 1.49
PKN1-204ENST00000585839 ADGRL2O95490 1459 aa24.33■■□□□ 1.49
PKN1-204ENST00000585839 NEFMP07197 916 aa24.33■■□□□ 1.49
PKN1-204ENST00000585839 GOLGA2Q08379 1002 aa24.32■■□□□ 1.48
PKN1-204ENST00000585839 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
PKN1-204ENST00000585839 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
PKN1-204ENST00000585839 ADGRF5Q8IZF2 1346 aa24.31■■□□□ 1.48
PKN1-204ENST00000585839 KDM5CP41229 1560 aa24.31■■□□□ 1.48
PKN1-204ENST00000585839 A2MP01023 1474 aa24.3■■□□□ 1.48
PKN1-204ENST00000585839 SLC12A5Q9H2X9 1139 aa24.3■■□□□ 1.48
PKN1-204ENST00000585839 MORC1Q86VD1 984 aa24.29■■□□□ 1.48
PKN1-204ENST00000585839 ARXQ96QS3 562 aa24.28■■□□□ 1.48
PKN1-204ENST00000585839 SPINK5Q9NQ38 1064 aaPredicted RBP24.28■■□□□ 1.48
PKN1-204ENST00000585839 PLA2R1Q13018 1463 aa24.27■■□□□ 1.48
PKN1-204ENST00000585839 CDC42BPAQ5VT25 1732 aa24.26■■□□□ 1.47
PKN1-204ENST00000585839 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
PKN1-204ENST00000585839 CDCA8Q53HL2 280 aa24.25■■□□□ 1.47
PKN1-204ENST00000585839 PDE3BQ13370 1112 aa24.25■■□□□ 1.47
PKN1-204ENST00000585839 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
PKN1-204ENST00000585839 UHRF1BP1Q6BDS2 1440 aa24.24■■□□□ 1.47
PKN1-204ENST00000585839 DMRT2Q9Y5R5 561 aa24.24■■□□□ 1.47
PKN1-204ENST00000585839 PARD3Q8TEW0 1356 aa24.24■■□□□ 1.47
PKN1-204ENST00000585839 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
PKN1-204ENST00000585839 PANK1Q8TE04 598 aa24.23■■□□□ 1.47
PKN1-204ENST00000585839 ABCA8O94911 1581 aa24.22■■□□□ 1.47
PKN1-204ENST00000585839 SAMD9LQ8IVG5 1584 aa24.22■■□□□ 1.47
PKN1-204ENST00000585839 KANK1Q14678 1352 aa24.22■■□□□ 1.47
PKN1-204ENST00000585839 LRPPRCP42704 1394 aaKnown RBP24.22■■□□□ 1.47
PKN1-204ENST00000585839 MLECQ14165 292 aa24.22■■□□□ 1.47
PKN1-204ENST00000585839 PLEKHH1Q9ULM0 1364 aa24.21■■□□□ 1.47
PKN1-204ENST00000585839 RAPGEF3O95398 923 aa24.2■■□□□ 1.46
PKN1-204ENST00000585839 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.2■■□□□ 1.46
PKN1-204ENST00000585839 STAG3Q9UJ98 1225 aa24.19■■□□□ 1.46
PKN1-204ENST00000585839 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms