RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 GOLGA6L19H0YKK7 550 aa9.04□□□□□ -0.96
CDH8-214ENST00000585315 CECR2Q9BXF3 1484 aa9.04□□□□□ -0.96
CDH8-214ENST00000585315 TPM1P09493 284 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 ERCC6Q03468 1493 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 ZKSCAN2Q63HK3 967 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 RRP1P56182 461 aaKnown RBP9.03□□□□□ -0.96
CDH8-214ENST00000585315 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.03□□□□□ -0.96
CDH8-214ENST00000585315 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
CDH8-214ENST00000585315 CCDC70Q6NSX1 233 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 APBB1O00213 710 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 CHMP5Q9NZZ3 219 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 SETQ01105 290 aaPredicted RBP9.03□□□□□ -0.96
CDH8-214ENST00000585315 GORABQ5T7V8 394 aa9.03□□□□□ -0.96
CDH8-214ENST00000585315 CCDC88BA6NC98 1476 aa9.02□□□□□ -0.96
CDH8-214ENST00000585315 DHX57Q6P158 1386 aaKnown RBP9.02□□□□□ -0.96
CDH8-214ENST00000585315 BECN2A8MW95 431 aa9.02□□□□□ -0.97
CDH8-214ENST00000585315 CPLX2Q6PUV4 134 aaKnown RBP9.02□□□□□ -0.97
CDH8-214ENST00000585315 SF3A1Q15459 793 aaKnown RBP9.02□□□□□ -0.97
CDH8-214ENST00000585315 DDX19BQ9UMR2 479 aa9.02□□□□□ -0.97
CDH8-214ENST00000585315 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
CDH8-214ENST00000585315 NUCB2P80303 420 aa9.02□□□□□ -0.97
CDH8-214ENST00000585315 ISY1Q9ULR0 285 aaKnown RBP9.02□□□□□ -0.97
CDH8-214ENST00000585315 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
CDH8-214ENST00000585315 ROCK1Q13464 1354 aa9.01□□□□□ -0.97
CDH8-214ENST00000585315 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
CDH8-214ENST00000585315 RUFY2Q8WXA3 655 aa9.01□□□□□ -0.97
CDH8-214ENST00000585315 RAPGEF2Q9Y4G8 1499 aa9.01□□□□□ -0.97
CDH8-214ENST00000585315 TAOK2Q9UL54 1235 aa9□□□□□ -0.97
CDH8-214ENST00000585315 IPO7O95373 1038 aaKnown RBP9□□□□□ -0.97
CDH8-214ENST00000585315 TULP1O00294 542 aaPredicted RBP9□□□□□ -0.97
CDH8-214ENST00000585315 ZKSCAN1P17029 563 aaPredicted RBP9□□□□□ -0.97
CDH8-214ENST00000585315 CEP89Q96ST8 783 aa9□□□□□ -0.97
CDH8-214ENST00000585315 A0A0U1RQG5 324 aaPredicted RBP9□□□□□ -0.97
CDH8-214ENST00000585315 CLUAP1Q96AJ1 413 aa9□□□□□ -0.97
CDH8-214ENST00000585315 HSP90B1P14625 803 aaKnown RBP9□□□□□ -0.97
CDH8-214ENST00000585315 TEX35Q5T0J7 233 aa9□□□□□ -0.97
CDH8-214ENST00000585315 ABCC8Q09428 1581 aa8.99□□□□□ -0.97
CDH8-214ENST00000585315 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
CDH8-214ENST00000585315 TOP2AP11388 1531 aaKnown RBP8.99□□□□□ -0.97
CDH8-214ENST00000585315 FAM43AQ8N2R8 423 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 RASSF8Q8NHQ8 419 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 SENP3Q9H4L4 574 aaPredicted RBP8.98□□□□□ -0.97
CDH8-214ENST00000585315 USP47Q96K76 1375 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 ANKRD20A12PQ8NF67 263 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 GGT6Q6P531 493 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
CDH8-214ENST00000585315 ST20-MTHFSA0A0A6YYL1 179 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 H3BQV1 296 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
CDH8-214ENST00000585315 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 API5Q9BZZ5 524 aaKnown RBP8.97□□□□□ -0.97
CDH8-214ENST00000585315 FOXD1Q16676 465 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 DIAPH3Q9NSV4 1193 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 MRE11P49959 708 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 FAM184AQ8NB25 1140 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 SAFB2Q14151 953 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDH8-214ENST00000585315 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 TAF7LQ5H9L4 462 aa8.97□□□□□ -0.97
CDH8-214ENST00000585315 CLSTN1O94985 981 aa8.96□□□□□ -0.97
CDH8-214ENST00000585315 TPM2P07951 284 aa8.96□□□□□ -0.97
CDH8-214ENST00000585315 ARGLU1Q9NWB6 273 aaPredicted RBP8.96□□□□□ -0.97
CDH8-214ENST00000585315 HMGN5P82970 282 aaKnown RBP8.96□□□□□ -0.98
CDH8-214ENST00000585315 DHX8Q14562 1220 aaKnown RBP8.96□□□□□ -0.98
CDH8-214ENST00000585315 STK26Q9P289 416 aa8.96□□□□□ -0.98
CDH8-214ENST00000585315 WASHC2AQ641Q2 1341 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 WASHC2CQ9Y4E1 1318 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 ACBD3Q9H3P7 528 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 SOX12O15370 315 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 SLC4A10Q6U841 1118 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 ANKRD45Q5TZF3 282 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 EVC2Q86UK5 1308 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 TMX4Q9H1E5 349 aaPredicted RBP8.95□□□□□ -0.98
CDH8-214ENST00000585315 MBD3O95983 291 aa8.95□□□□□ -0.98
CDH8-214ENST00000585315 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
CDH8-214ENST00000585315 CDR1P51861 262 aa8.94□□□□□ -0.98
CDH8-214ENST00000585315 HSP90AB4PQ58FF6 505 aa8.94□□□□□ -0.98
CDH8-214ENST00000585315 PANK3Q9H999 370 aa8.94□□□□□ -0.98
CDH8-214ENST00000585315 TPD52L1Q16890 204 aaPredicted RBP8.94□□□□□ -0.98
CDH8-214ENST00000585315 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
CDH8-214ENST00000585315 DZIP1LQ8IYY4 767 aaKnown RBP8.94□□□□□ -0.98
CDH8-214ENST00000585315 MIA2Q96PC5 1412 aa8.94□□□□□ -0.98
CDH8-214ENST00000585315 KIF3BO15066 747 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 MCM2P49736 904 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 AKAP17AQ02040 695 aaKnown RBP8.93□□□□□ -0.98
CDH8-214ENST00000585315 NEXNQ0ZGT2 675 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
CDH8-214ENST00000585315 INTS3Q68E01 1043 aaKnown RBP8.93□□□□□ -0.98
CDH8-214ENST00000585315 ARID3AQ99856 593 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 AMPHP49418 695 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 SYNE3Q6ZMZ3 975 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 EXOC6Q8TAG9 804 aa8.93□□□□□ -0.98
CDH8-214ENST00000585315 CCDC47Q96A33 483 aaKnown RBP8.92□□□□□ -0.98
CDH8-214ENST00000585315 BRD4O60885 1362 aaPredicted RBP8.92□□□□□ -0.98
CDH8-214ENST00000585315 EID1Q9Y6B2 187 aa8.92□□□□□ -0.98
CDH8-214ENST00000585315 HSP90B2PQ58FF3 399 aa8.92□□□□□ -0.98
CDH8-214ENST00000585315 PDCP20941 246 aa8.92□□□□□ -0.98
CDH8-214ENST00000585315 CCDC146Q8IYE0 955 aa8.92□□□□□ -0.98
CDH8-214ENST00000585315 NAT10Q9H0A0 1025 aaKnown RBP8.92□□□□□ -0.98
CDH8-214ENST00000585315 CHMP3Q9Y3E7 222 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms