RNA–Protein interactions for RNA: ENST00000584809.1

LRRC46-205, Transcript of leucine rich repeat containing 46, humanhuman

TSL 3

Gene LRRC46, Length 859 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46-205ENST00000584809 CLIP1P30622 1438 aa13.3□□□□□ -0.28
LRRC46-205ENST00000584809 SUPT6HQ7KZ85 1726 aaKnown RBP13.3□□□□□ -0.28
LRRC46-205ENST00000584809 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
LRRC46-205ENST00000584809 IQSEC2Q5JU85 1478 aa13.3□□□□□ -0.28
LRRC46-205ENST00000584809 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
LRRC46-205ENST00000584809 ESF1Q9H501 851 aaKnown RBP13.3□□□□□ -0.28
LRRC46-205ENST00000584809 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
LRRC46-205ENST00000584809 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
LRRC46-205ENST00000584809 ABCC1P33527 1531 aa13.29□□□□□ -0.28
LRRC46-205ENST00000584809 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
LRRC46-205ENST00000584809 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
LRRC46-205ENST00000584809 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
LRRC46-205ENST00000584809 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
LRRC46-205ENST00000584809 NCOA1Q15788 1441 aa13.28□□□□□ -0.28
LRRC46-205ENST00000584809 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
LRRC46-205ENST00000584809 AGLP35573 1532 aa13.27□□□□□ -0.29
LRRC46-205ENST00000584809 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
LRRC46-205ENST00000584809 MLH3Q9UHC1 1453 aa13.26□□□□□ -0.29
LRRC46-205ENST00000584809 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
LRRC46-205ENST00000584809 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
LRRC46-205ENST00000584809 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
LRRC46-205ENST00000584809 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
LRRC46-205ENST00000584809 ARHGAP35Q9NRY4 1499 aa13.24□□□□□ -0.29
LRRC46-205ENST00000584809 STAG3Q9UJ98 1225 aa13.24□□□□□ -0.29
LRRC46-205ENST00000584809 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
LRRC46-205ENST00000584809 CDC42BPAQ5VT25 1732 aa13.24□□□□□ -0.29
LRRC46-205ENST00000584809 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
LRRC46-205ENST00000584809 MYO3AQ8NEV4 1616 aa13.24□□□□□ -0.29
LRRC46-205ENST00000584809 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
LRRC46-205ENST00000584809 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
LRRC46-205ENST00000584809 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
LRRC46-205ENST00000584809 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
LRRC46-205ENST00000584809 NPATQ14207 1427 aa13.2□□□□□ -0.3
LRRC46-205ENST00000584809 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
LRRC46-205ENST00000584809 SAMD9LQ8IVG5 1584 aa13.19□□□□□ -0.3
LRRC46-205ENST00000584809 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
LRRC46-205ENST00000584809 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
LRRC46-205ENST00000584809 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
LRRC46-205ENST00000584809 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
LRRC46-205ENST00000584809 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
LRRC46-205ENST00000584809 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
LRRC46-205ENST00000584809 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
LRRC46-205ENST00000584809 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
LRRC46-205ENST00000584809 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
LRRC46-205ENST00000584809 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
LRRC46-205ENST00000584809 PLXNC1O60486 1568 aa13.14□□□□□ -0.31
LRRC46-205ENST00000584809 INO80Q9ULG1 1556 aaPredicted RBP13.14□□□□□ -0.31
LRRC46-205ENST00000584809 TCOF1Q13428 1488 aaKnown RBP13.12□□□□□ -0.31
LRRC46-205ENST00000584809 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
LRRC46-205ENST00000584809 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
LRRC46-205ENST00000584809 PKD2Q13563 968 aa13.11□□□□□ -0.31
LRRC46-205ENST00000584809 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
LRRC46-205ENST00000584809 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
LRRC46-205ENST00000584809 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
LRRC46-205ENST00000584809 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
LRRC46-205ENST00000584809 A2MP01023 1474 aa13.1□□□□□ -0.31
LRRC46-205ENST00000584809 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
LRRC46-205ENST00000584809 DNMT1P26358 1616 aaKnown RBP13.08□□□□□ -0.32
LRRC46-205ENST00000584809 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
LRRC46-205ENST00000584809 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
LRRC46-205ENST00000584809 CPS1P31327 1500 aa13.07□□□□□ -0.32
LRRC46-205ENST00000584809 A2ML1A8K2U0 1454 aa13.06□□□□□ -0.32
LRRC46-205ENST00000584809 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
LRRC46-205ENST00000584809 GGT6Q6P531 493 aa13.06□□□□□ -0.32
LRRC46-205ENST00000584809 NEURL4Q96JN8 1562 aa13.06□□□□□ -0.32
LRRC46-205ENST00000584809 GPATCH8Q9UKJ3 1502 aaKnown RBP13.05□□□□□ -0.32
LRRC46-205ENST00000584809 HSPA1LP34931 641 aa13.05□□□□□ -0.32
LRRC46-205ENST00000584809 HNRNPMP52272 730 aaKnown RBP eCLIP13.05□□□□□ -0.32
LRRC46-205ENST00000584809 TOM1O60784 492 aa13.02□□□□□ -0.33
LRRC46-205ENST00000584809 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
LRRC46-205ENST00000584809 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.33
LRRC46-205ENST00000584809 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
LRRC46-205ENST00000584809 CHADLQ6NUI6 762 aa13□□□□□ -0.33
LRRC46-205ENST00000584809 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
LRRC46-205ENST00000584809 VWDEQ8N2E2 1590 aa12.99□□□□□ -0.33
LRRC46-205ENST00000584809 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
LRRC46-205ENST00000584809 TNRQ92752 1358 aa12.99□□□□□ -0.33
LRRC46-205ENST00000584809 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
LRRC46-205ENST00000584809 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
LRRC46-205ENST00000584809 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
LRRC46-205ENST00000584809 PZPP20742 1482 aa12.97□□□□□ -0.33
LRRC46-205ENST00000584809 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
LRRC46-205ENST00000584809 SYNMO15061 1565 aa12.97□□□□□ -0.33
LRRC46-205ENST00000584809 MTUS2Q5JR59 1369 aa12.96□□□□□ -0.33
LRRC46-205ENST00000584809 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
LRRC46-205ENST00000584809 FAM135AQ9P2D6 1515 aa12.96□□□□□ -0.33
LRRC46-205ENST00000584809 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
LRRC46-205ENST00000584809 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
LRRC46-205ENST00000584809 UGGT1Q9NYU2 1555 aa12.95□□□□□ -0.34
LRRC46-205ENST00000584809 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
LRRC46-205ENST00000584809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
LRRC46-205ENST00000584809 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
LRRC46-205ENST00000584809 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
LRRC46-205ENST00000584809 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
LRRC46-205ENST00000584809 NLRP1Q9C000 1473 aa12.93□□□□□ -0.34
LRRC46-205ENST00000584809 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
LRRC46-205ENST00000584809 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
LRRC46-205ENST00000584809 FBXO31Q5XUX0 539 aaPredicted RBP12.92□□□□□ -0.34
LRRC46-205ENST00000584809 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
LRRC46-205ENST00000584809 DHX29Q7Z478 1369 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms