RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 BCAMP50895 628 aa11.17□□□□□ -0.62
TTC39C-210ENST00000584424 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
TTC39C-210ENST00000584424 CADPS2Q86UW7 1296 aa11.16□□□□□ -0.62
TTC39C-210ENST00000584424 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
TTC39C-210ENST00000584424 PHF14O94880 888 aa11.15□□□□□ -0.62
TTC39C-210ENST00000584424 KIAA1468Q9P260 1216 aa11.14□□□□□ -0.63
TTC39C-210ENST00000584424 SEPT9Q9UHD8 586 aaPredicted RBP11.11□□□□□ -0.63
TTC39C-210ENST00000584424 SOWAHBA6NEL2 793 aa11.1□□□□□ -0.63
TTC39C-210ENST00000584424 DPYSL4O14531 572 aa11.1□□□□□ -0.63
TTC39C-210ENST00000584424 LAPTM4BQ86VI4 370 aa11.1□□□□□ -0.63
TTC39C-210ENST00000584424 RBM33Q96EV2 1170 aaKnown RBP11.1□□□□□ -0.63
TTC39C-210ENST00000584424 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
TTC39C-210ENST00000584424 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
TTC39C-210ENST00000584424 WBP1LQ9NX94 342 aa11.08□□□□□ -0.64
TTC39C-210ENST00000584424 ITGBL1O95965 494 aaPredicted RBP11.07□□□□□ -0.64
TTC39C-210ENST00000584424 EPAS1Q99814 870 aa11.07□□□□□ -0.64
TTC39C-210ENST00000584424 DDX12PQ92771 950 aa11.06□□□□□ -0.64
TTC39C-210ENST00000584424 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
TTC39C-210ENST00000584424 KCNC4Q03721 635 aa11.03□□□□□ -0.64
TTC39C-210ENST00000584424 ONECUT3O60422 494 aaPredicted RBP11.02□□□□□ -0.65
TTC39C-210ENST00000584424 CAMK2BQ13554 666 aa11.02□□□□□ -0.65
TTC39C-210ENST00000584424 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
TTC39C-210ENST00000584424 FAM98CQ17RN3 349 aaKnown RBP11.01□□□□□ -0.65
TTC39C-210ENST00000584424 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
TTC39C-210ENST00000584424 HPS5Q9UPZ3 1129 aa11.01□□□□□ -0.65
TTC39C-210ENST00000584424 LRCH3Q96II8 777 aa11□□□□□ -0.65
TTC39C-210ENST00000584424 Q6ZNB5 142 aa10.99□□□□□ -0.65
TTC39C-210ENST00000584424 NBR1Q14596 966 aa10.98□□□□□ -0.65
TTC39C-210ENST00000584424 TSR3Q9UJK0 312 aaKnown RBP10.98□□□□□ -0.65
TTC39C-210ENST00000584424 MAP3K7O43318 606 aa10.97□□□□□ -0.65
TTC39C-210ENST00000584424 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
TTC39C-210ENST00000584424 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
TTC39C-210ENST00000584424 TSKSQ9UJT2 592 aa10.94□□□□□ -0.66
TTC39C-210ENST00000584424 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
TTC39C-210ENST00000584424 PPP4CP60510 307 aa10.92□□□□□ -0.66
TTC39C-210ENST00000584424 SMAPO00193 183 aa10.91□□□□□ -0.66
TTC39C-210ENST00000584424 PDIA6Q15084 440 aa10.88□□□□□ -0.67
TTC39C-210ENST00000584424 SAMD7Q7Z3H4 446 aa10.88□□□□□ -0.67
TTC39C-210ENST00000584424 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
TTC39C-210ENST00000584424 GRXCR2A6NFK2 248 aa10.86□□□□□ -0.67
TTC39C-210ENST00000584424 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-210ENST00000584424 RNF40O75150 1001 aa10.84□□□□□ -0.67
TTC39C-210ENST00000584424 PRSS12P56730 875 aa10.84□□□□□ -0.67
TTC39C-210ENST00000584424 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
TTC39C-210ENST00000584424 GFRA3O60609 400 aa10.83□□□□□ -0.68
TTC39C-210ENST00000584424 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
TTC39C-210ENST00000584424 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
TTC39C-210ENST00000584424 TJAP1Q5JTD0 557 aa10.82□□□□□ -0.68
TTC39C-210ENST00000584424 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
TTC39C-210ENST00000584424 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
TTC39C-210ENST00000584424 TATDN2Q93075 761 aa10.81□□□□□ -0.68
TTC39C-210ENST00000584424 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
TTC39C-210ENST00000584424 LAPTM4AQ15012 233 aa10.8□□□□□ -0.68
TTC39C-210ENST00000584424 MTRQ99707 1265 aa10.8□□□□□ -0.68
TTC39C-210ENST00000584424 PRKD2Q9BZL6 878 aa10.8□□□□□ -0.68
TTC39C-210ENST00000584424 E2F4Q16254 413 aa10.79□□□□□ -0.68
TTC39C-210ENST00000584424 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
TTC39C-210ENST00000584424 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
TTC39C-210ENST00000584424 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
TTC39C-210ENST00000584424 IL21Q9HBE4 155 aa10.78□□□□□ -0.68
TTC39C-210ENST00000584424 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
TTC39C-210ENST00000584424 NUDT18Q6ZVK8 323 aa10.77□□□□□ -0.69
TTC39C-210ENST00000584424 CDHR5Q9HBB8 845 aa10.77□□□□□ -0.69
TTC39C-210ENST00000584424 WDR70Q9NW82 654 aa10.77□□□□□ -0.69
TTC39C-210ENST00000584424 TRAF7Q6Q0C0 670 aa10.76□□□□□ -0.69
TTC39C-210ENST00000584424 ZNF516Q92618 1163 aa10.76□□□□□ -0.69
TTC39C-210ENST00000584424 LCE2BO14633 110 aa10.73□□□□□ -0.69
TTC39C-210ENST00000584424 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-210ENST00000584424 APLP1P51693 650 aa10.72□□□□□ -0.69
TTC39C-210ENST00000584424 OSBPP22059 807 aa10.71□□□□□ -0.69
TTC39C-210ENST00000584424 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
TTC39C-210ENST00000584424 NKX2-3Q8TAU0 364 aa10.7□□□□□ -0.7
TTC39C-210ENST00000584424 CFAP44Q96MT7 982 aa10.7□□□□□ -0.7
TTC39C-210ENST00000584424 NRG2O14511 850 aaPredicted RBP10.69□□□□□ -0.7
TTC39C-210ENST00000584424 COPS2P61201 443 aa10.69□□□□□ -0.7
TTC39C-210ENST00000584424 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
TTC39C-210ENST00000584424 V9GY48 417 aaPredicted RBP10.68□□□□□ -0.7
TTC39C-210ENST00000584424 PADI6Q6TGC4 694 aa10.67□□□□□ -0.7
TTC39C-210ENST00000584424 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
TTC39C-210ENST00000584424 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
TTC39C-210ENST00000584424 RBM27Q9P2N5 1060 aaKnown RBP10.66□□□□□ -0.7
TTC39C-210ENST00000584424 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
TTC39C-210ENST00000584424 PDZRN3Q9UPQ7 1066 aa10.64□□□□□ -0.71
TTC39C-210ENST00000584424 GGCXP38435 758 aa10.63□□□□□ -0.71
TTC39C-210ENST00000584424 NECTIN2Q92692 538 aa10.63□□□□□ -0.71
TTC39C-210ENST00000584424 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
TTC39C-210ENST00000584424 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
TTC39C-210ENST00000584424 TTC13Q8NBP0 860 aa10.6□□□□□ -0.71
TTC39C-210ENST00000584424 ZPR1O75312 459 aa10.58□□□□□ -0.72
TTC39C-210ENST00000584424 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
TTC39C-210ENST00000584424 PCDHB3Q9Y5E6 796 aa10.57□□□□□ -0.72
TTC39C-210ENST00000584424 EYA1Q99502 592 aa10.56□□□□□ -0.72
TTC39C-210ENST00000584424 TMUB1Q9BVT8 246 aa10.54□□□□□ -0.72
TTC39C-210ENST00000584424 BLOC1S3Q6QNY0 202 aa10.53□□□□□ -0.72
TTC39C-210ENST00000584424 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
TTC39C-210ENST00000584424 RNF223E7ERA6 249 aa10.51□□□□□ -0.73
TTC39C-210ENST00000584424 TLL1O43897 1013 aa10.51□□□□□ -0.73
TTC39C-210ENST00000584424 SLC19A1P41440 591 aa10.51□□□□□ -0.73
TTC39C-210ENST00000584424 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
TTC39C-210ENST00000584424 DNAJB2P25686 324 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms