RNA–Protein interactions for RNA: ENST00000584287.5

ARHGAP28-214, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-214ENST00000584287 NBR1Q14596 966 aa9.24□□□□□ -0.93
ARHGAP28-214ENST00000584287 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
ARHGAP28-214ENST00000584287 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
ARHGAP28-214ENST00000584287 COL9A1P20849 921 aa9.22□□□□□ -0.93
ARHGAP28-214ENST00000584287 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
ARHGAP28-214ENST00000584287 MLLT3P42568 568 aaPredicted RBP9.21□□□□□ -0.94
ARHGAP28-214ENST00000584287 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
ARHGAP28-214ENST00000584287 KCNH8Q96L42 1107 aa9.21□□□□□ -0.94
ARHGAP28-214ENST00000584287 TK2O00142 265 aa9.2□□□□□ -0.94
ARHGAP28-214ENST00000584287 OSBPP22059 807 aa9.2□□□□□ -0.94
ARHGAP28-214ENST00000584287 EN1Q05925 392 aaPredicted RBP9.2□□□□□ -0.94
ARHGAP28-214ENST00000584287 TSR1Q2NL82 804 aaKnown RBP9.2□□□□□ -0.94
ARHGAP28-214ENST00000584287 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
ARHGAP28-214ENST00000584287 ZBED2Q9BTP6 218 aa9.19□□□□□ -0.94
ARHGAP28-214ENST00000584287 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
ARHGAP28-214ENST00000584287 SEMA3EO15041 775 aa9.18□□□□□ -0.94
ARHGAP28-214ENST00000584287 MAP3K7O43318 606 aa9.18□□□□□ -0.94
ARHGAP28-214ENST00000584287 HRO43593 1189 aa9.18□□□□□ -0.94
ARHGAP28-214ENST00000584287 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
ARHGAP28-214ENST00000584287 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
ARHGAP28-214ENST00000584287 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
ARHGAP28-214ENST00000584287 CDHR5Q9HBB8 845 aa9.14□□□□□ -0.95
ARHGAP28-214ENST00000584287 BHMG1C9JSJ3 638 aaPredicted RBP9.13□□□□□ -0.95
ARHGAP28-214ENST00000584287 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
ARHGAP28-214ENST00000584287 TESPA1A2RU30 521 aaPredicted RBP9.11□□□□□ -0.95
ARHGAP28-214ENST00000584287 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
ARHGAP28-214ENST00000584287 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
ARHGAP28-214ENST00000584287 KIAA1468Q9P260 1216 aa9.08□□□□□ -0.96
ARHGAP28-214ENST00000584287 RABGEF1Q9UJ41 708 aa9.08□□□□□ -0.96
ARHGAP28-214ENST00000584287 TSKSQ9UJT2 592 aa9.08□□□□□ -0.96
ARHGAP28-214ENST00000584287 FAM198AQ9UFP1 575 aa9.07□□□□□ -0.96
ARHGAP28-214ENST00000584287 ONECUT3O60422 494 aaPredicted RBP9.06□□□□□ -0.96
ARHGAP28-214ENST00000584287 CDCA7LQ96GN5 454 aa9.06□□□□□ -0.96
ARHGAP28-214ENST00000584287 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
ARHGAP28-214ENST00000584287 PRSS12P56730 875 aa9.05□□□□□ -0.96
ARHGAP28-214ENST00000584287 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
ARHGAP28-214ENST00000584287 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
ARHGAP28-214ENST00000584287 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
ARHGAP28-214ENST00000584287 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
ARHGAP28-214ENST00000584287 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
ARHGAP28-214ENST00000584287 KCTD12Q96CX2 325 aaKnown RBP9.03□□□□□ -0.96
ARHGAP28-214ENST00000584287 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
ARHGAP28-214ENST00000584287 NUTM2FA1L443 756 aa9.02□□□□□ -0.97
ARHGAP28-214ENST00000584287 PTGDRQ13258 359 aa9.02□□□□□ -0.97
ARHGAP28-214ENST00000584287 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
ARHGAP28-214ENST00000584287 PACS2Q86VP3 889 aa9.01□□□□□ -0.97
ARHGAP28-214ENST00000584287 TTC13Q8NBP0 860 aa9.01□□□□□ -0.97
ARHGAP28-214ENST00000584287 SMAPO00193 183 aa9□□□□□ -0.97
ARHGAP28-214ENST00000584287 SMYD5Q6GMV2 418 aa9□□□□□ -0.97
ARHGAP28-214ENST00000584287 GOLGA8CPA6NN73 597 aa8.99□□□□□ -0.97
ARHGAP28-214ENST00000584287 LAPTM4BQ86VI4 370 aa8.99□□□□□ -0.97
ARHGAP28-214ENST00000584287 WNT2BQ93097 391 aa8.99□□□□□ -0.97
ARHGAP28-214ENST00000584287 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
ARHGAP28-214ENST00000584287 TATDN2Q93075 761 aa8.98□□□□□ -0.97
ARHGAP28-214ENST00000584287 FAM98CQ17RN3 349 aaKnown RBP8.97□□□□□ -0.97
ARHGAP28-214ENST00000584287 THSD4Q6ZMP0 1018 aa8.97□□□□□ -0.97
ARHGAP28-214ENST00000584287 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
ARHGAP28-214ENST00000584287 GPR37O15354 613 aa8.96□□□□□ -0.98
ARHGAP28-214ENST00000584287 FCHSD2O94868 740 aa8.96□□□□□ -0.98
ARHGAP28-214ENST00000584287 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.98
ARHGAP28-214ENST00000584287 PNMA3Q9UL41 463 aa8.96□□□□□ -0.98
ARHGAP28-214ENST00000584287 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
ARHGAP28-214ENST00000584287 NBPF26B4DH59 902 aa8.94□□□□□ -0.98
ARHGAP28-214ENST00000584287 BCAMP50895 628 aa8.94□□□□□ -0.98
ARHGAP28-214ENST00000584287 PTPN5P54829 565 aa8.94□□□□□ -0.98
ARHGAP28-214ENST00000584287 SLC24A1O60721 1099 aa8.93□□□□□ -0.98
ARHGAP28-214ENST00000584287 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
ARHGAP28-214ENST00000584287 FECHP22830 423 aa8.92□□□□□ -0.98
ARHGAP28-214ENST00000584287 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
ARHGAP28-214ENST00000584287 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
ARHGAP28-214ENST00000584287 GPIHBP1Q8IV16 184 aa8.91□□□□□ -0.98
ARHGAP28-214ENST00000584287 EYA1Q99502 592 aa8.91□□□□□ -0.98
ARHGAP28-214ENST00000584287 HIC1Q14526 733 aa8.9□□□□□ -0.98
ARHGAP28-214ENST00000584287 SAMD7Q7Z3H4 446 aa8.9□□□□□ -0.98
ARHGAP28-214ENST00000584287 ADGRG1Q9Y653 693 aa8.9□□□□□ -0.98
ARHGAP28-214ENST00000584287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.89□□□□□ -0.99
ARHGAP28-214ENST00000584287 GNPATO15228 680 aa8.88□□□□□ -0.99
ARHGAP28-214ENST00000584287 LRCH3Q96II8 777 aa8.88□□□□□ -0.99
ARHGAP28-214ENST00000584287 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
ARHGAP28-214ENST00000584287 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
ARHGAP28-214ENST00000584287 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
ARHGAP28-214ENST00000584287 HPS5Q9UPZ3 1129 aa8.86□□□□□ -0.99
ARHGAP28-214ENST00000584287 SWT1Q5T5J6 900 aaKnown RBP8.85□□□□□ -0.99
ARHGAP28-214ENST00000584287 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
ARHGAP28-214ENST00000584287 LMOD2Q6P5Q4 547 aa8.84□□□□□ -0.99
ARHGAP28-214ENST00000584287 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
ARHGAP28-214ENST00000584287 RCCD1A6NED2 376 aa8.82□□□□□ -1
ARHGAP28-214ENST00000584287 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
ARHGAP28-214ENST00000584287 PXYLP1Q8TE99 480 aa8.82□□□□□ -1
ARHGAP28-214ENST00000584287 DNAJB2P25686 324 aa8.81□□□□□ -1
ARHGAP28-214ENST00000584287 RNF40O75150 1001 aa8.8□□□□□ -1
ARHGAP28-214ENST00000584287 OATP04181 439 aa8.8□□□□□ -1
ARHGAP28-214ENST00000584287 HDGFP51858 240 aaKnown RBP8.8□□□□□ -1
ARHGAP28-214ENST00000584287 PPP4CP60510 307 aa8.8□□□□□ -1
ARHGAP28-214ENST00000584287 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
ARHGAP28-214ENST00000584287 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
ARHGAP28-214ENST00000584287 PHOX2BQ99453 314 aa8.79□□□□□ -1
ARHGAP28-214ENST00000584287 NLRP7Q8WX94 980 aa8.78□□□□□ -1
ARHGAP28-214ENST00000584287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1.01
ARHGAP28-214ENST00000584287 NYAP1Q6ZVC0 841 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms