RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
PRKCA-205ENST00000583775 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
PRKCA-205ENST00000583775 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
PRKCA-205ENST00000583775 NBPF3Q9H094 633 aa10.98□□□□□ -0.65
PRKCA-205ENST00000583775 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
PRKCA-205ENST00000583775 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
PRKCA-205ENST00000583775 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
PRKCA-205ENST00000583775 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
PRKCA-205ENST00000583775 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
PRKCA-205ENST00000583775 COL9A1P20849 921 aa10.95□□□□□ -0.66
PRKCA-205ENST00000583775 LARP6Q9BRS8 491 aaKnown RBP10.95□□□□□ -0.66
PRKCA-205ENST00000583775 DDX27Q96GQ7 796 aaKnown RBP10.94□□□□□ -0.66
PRKCA-205ENST00000583775 PROX2Q3B8N5 592 aa10.93□□□□□ -0.66
PRKCA-205ENST00000583775 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
PRKCA-205ENST00000583775 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
PRKCA-205ENST00000583775 LAPTM4BQ86VI4 370 aa10.9□□□□□ -0.66
PRKCA-205ENST00000583775 SOWAHBA6NEL2 793 aa10.89□□□□□ -0.67
PRKCA-205ENST00000583775 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
PRKCA-205ENST00000583775 PHF14O94880 888 aa10.88□□□□□ -0.67
PRKCA-205ENST00000583775 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
PRKCA-205ENST00000583775 ONECUT3O60422 494 aaPredicted RBP10.87□□□□□ -0.67
PRKCA-205ENST00000583775 BCAMP50895 628 aa10.87□□□□□ -0.67
PRKCA-205ENST00000583775 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
PRKCA-205ENST00000583775 TYW1BQ6NUM6 668 aa10.86□□□□□ -0.67
PRKCA-205ENST00000583775 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
PRKCA-205ENST00000583775 NACADO15069 1562 aa10.85□□□□□ -0.67
PRKCA-205ENST00000583775 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
PRKCA-205ENST00000583775 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
PRKCA-205ENST00000583775 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
PRKCA-205ENST00000583775 CADPS2Q86UW7 1296 aa10.83□□□□□ -0.68
PRKCA-205ENST00000583775 CAMK2BQ13554 666 aa10.82□□□□□ -0.68
PRKCA-205ENST00000583775 WBP1LQ9NX94 342 aa10.82□□□□□ -0.68
PRKCA-205ENST00000583775 C6orf132Q5T0Z8 1188 aa10.8□□□□□ -0.68
PRKCA-205ENST00000583775 EPAS1Q99814 870 aa10.78□□□□□ -0.68
PRKCA-205ENST00000583775 KCNC4Q03721 635 aa10.77□□□□□ -0.69
PRKCA-205ENST00000583775 TRIM6-TRIM34B2RNG4 842 aa10.76□□□□□ -0.69
PRKCA-205ENST00000583775 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
PRKCA-205ENST00000583775 LCE2BO14633 110 aa10.75□□□□□ -0.69
PRKCA-205ENST00000583775 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
PRKCA-205ENST00000583775 TSR3Q9UJK0 312 aaKnown RBP10.72□□□□□ -0.69
PRKCA-205ENST00000583775 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
PRKCA-205ENST00000583775 ABCC9O60706 1549 aa10.72□□□□□ -0.69
PRKCA-205ENST00000583775 Q6ZNB5 142 aa10.71□□□□□ -0.69
PRKCA-205ENST00000583775 DPYSL4O14531 572 aa10.7□□□□□ -0.7
PRKCA-205ENST00000583775 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
PRKCA-205ENST00000583775 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
PRKCA-205ENST00000583775 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
PRKCA-205ENST00000583775 RB1CC1Q8TDY2 1594 aa10.68□□□□□ -0.7
PRKCA-205ENST00000583775 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
PRKCA-205ENST00000583775 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
PRKCA-205ENST00000583775 TJAP1Q5JTD0 557 aa10.65□□□□□ -0.7
PRKCA-205ENST00000583775 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
PRKCA-205ENST00000583775 SCRIBQ14160 1630 aa10.65□□□□□ -0.7
PRKCA-205ENST00000583775 DDX12PQ92771 950 aa10.64□□□□□ -0.71
PRKCA-205ENST00000583775 EN1Q05925 392 aaPredicted RBP10.63□□□□□ -0.71
PRKCA-205ENST00000583775 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
PRKCA-205ENST00000583775 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
PRKCA-205ENST00000583775 FAM198AQ9UFP1 575 aa10.61□□□□□ -0.71
PRKCA-205ENST00000583775 C3orf80F5H4A9 247 aa10.6□□□□□ -0.71
PRKCA-205ENST00000583775 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
PRKCA-205ENST00000583775 PDIA6Q15084 440 aa10.59□□□□□ -0.71
PRKCA-205ENST00000583775 TRAF7Q6Q0C0 670 aa10.59□□□□□ -0.71
PRKCA-205ENST00000583775 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
PRKCA-205ENST00000583775 GFRA3O60609 400 aa10.58□□□□□ -0.72
PRKCA-205ENST00000583775 PRIM1P49642 420 aaKnown RBP10.57□□□□□ -0.72
PRKCA-205ENST00000583775 PPP4CP60510 307 aa10.57□□□□□ -0.72
PRKCA-205ENST00000583775 NBR1Q14596 966 aa10.56□□□□□ -0.72
PRKCA-205ENST00000583775 SAMD7Q7Z3H4 446 aa10.56□□□□□ -0.72
PRKCA-205ENST00000583775 CDCA7LQ96GN5 454 aa10.56□□□□□ -0.72
PRKCA-205ENST00000583775 MAP3K7O43318 606 aa10.55□□□□□ -0.72
PRKCA-205ENST00000583775 PRSS12P56730 875 aa10.55□□□□□ -0.72
PRKCA-205ENST00000583775 PRKD2Q9BZL6 878 aa10.54□□□□□ -0.72
PRKCA-205ENST00000583775 SMAPO00193 183 aa10.53□□□□□ -0.72
PRKCA-205ENST00000583775 NRG2O14511 850 aaPredicted RBP10.53□□□□□ -0.72
PRKCA-205ENST00000583775 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
PRKCA-205ENST00000583775 MTRQ99707 1265 aa10.53□□□□□ -0.72
PRKCA-205ENST00000583775 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
PRKCA-205ENST00000583775 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.73
PRKCA-205ENST00000583775 IL21Q9HBE4 155 aa10.52□□□□□ -0.73
PRKCA-205ENST00000583775 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
PRKCA-205ENST00000583775 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
PRKCA-205ENST00000583775 ZNF516Q92618 1163 aa10.5□□□□□ -0.73
PRKCA-205ENST00000583775 TATDN2Q93075 761 aa10.5□□□□□ -0.73
PRKCA-205ENST00000583775 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
PRKCA-205ENST00000583775 RSF1Q96T23 1441 aaPredicted RBP10.48□□□□□ -0.73
PRKCA-205ENST00000583775 APLP1P51693 650 aa10.47□□□□□ -0.73
PRKCA-205ENST00000583775 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
PRKCA-205ENST00000583775 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
PRKCA-205ENST00000583775 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
PRKCA-205ENST00000583775 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
PRKCA-205ENST00000583775 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
PRKCA-205ENST00000583775 NBPF26B4DH59 902 aa10.44□□□□□ -0.74
PRKCA-205ENST00000583775 OSBPP22059 807 aa10.44□□□□□ -0.74
PRKCA-205ENST00000583775 NKX2-3Q8TAU0 364 aa10.44□□□□□ -0.74
PRKCA-205ENST00000583775 NUDT18Q6ZVK8 323 aa10.42□□□□□ -0.74
PRKCA-205ENST00000583775 CDHR5Q9HBB8 845 aa10.42□□□□□ -0.74
PRKCA-205ENST00000583775 NPDC1Q9NQX5 325 aaPredicted RBP10.4□□□□□ -0.74
PRKCA-205ENST00000583775 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
PRKCA-205ENST00000583775 E2F4Q16254 413 aa10.38□□□□□ -0.75
PRKCA-205ENST00000583775 PDZRN3Q9UPQ7 1066 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms