RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
NDEL1-216ENST00000583066 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
NDEL1-216ENST00000583066 MYO5CQ9NQX4 1742 aa10.42□□□□□ -0.74
NDEL1-216ENST00000583066 PKD2Q13563 968 aa10.42□□□□□ -0.74
NDEL1-216ENST00000583066 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
NDEL1-216ENST00000583066 PLCH2O75038 1416 aa10.41□□□□□ -0.74
NDEL1-216ENST00000583066 VWDEQ8N2E2 1590 aa10.41□□□□□ -0.74
NDEL1-216ENST00000583066 ZNF518AQ6AHZ1 1483 aa10.41□□□□□ -0.74
NDEL1-216ENST00000583066 PLEKHD1A6NEE1 506 aa10.4□□□□□ -0.74
NDEL1-216ENST00000583066 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
NDEL1-216ENST00000583066 PTPRKQ15262 1439 aa10.4□□□□□ -0.75
NDEL1-216ENST00000583066 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.75
NDEL1-216ENST00000583066 STRCP1A6NGW2 1772 aa10.39□□□□□ -0.75
NDEL1-216ENST00000583066 CLTCQ00610 1675 aaKnown RBP10.39□□□□□ -0.75
NDEL1-216ENST00000583066 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
NDEL1-216ENST00000583066 CDK13Q14004 1512 aaKnown RBP10.38□□□□□ -0.75
NDEL1-216ENST00000583066 PITPNM1O00562 1244 aa10.38□□□□□ -0.75
NDEL1-216ENST00000583066 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
NDEL1-216ENST00000583066 RNF17Q9BXT8 1623 aaKnown RBP10.37□□□□□ -0.75
NDEL1-216ENST00000583066 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
NDEL1-216ENST00000583066 KIF14Q15058 1648 aa10.36□□□□□ -0.75
NDEL1-216ENST00000583066 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
NDEL1-216ENST00000583066 KIDINS220Q9ULH0 1771 aa10.36□□□□□ -0.75
NDEL1-216ENST00000583066 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
NDEL1-216ENST00000583066 HRCP23327 699 aa10.35□□□□□ -0.75
NDEL1-216ENST00000583066 FAM9AQ8IZU1 332 aaPredicted RBP10.35□□□□□ -0.75
NDEL1-216ENST00000583066 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
NDEL1-216ENST00000583066 MLH3Q9UHC1 1453 aa10.35□□□□□ -0.75
NDEL1-216ENST00000583066 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
NDEL1-216ENST00000583066 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
NDEL1-216ENST00000583066 MYT1LQ9UL68 1186 aa10.34□□□□□ -0.75
NDEL1-216ENST00000583066 ARHGAP5Q13017 1502 aa10.33□□□□□ -0.76
NDEL1-216ENST00000583066 ITSN2Q9NZM3 1697 aa10.32□□□□□ -0.76
NDEL1-216ENST00000583066 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
NDEL1-216ENST00000583066 EFCAB2Q5VUJ9 269 aa10.32□□□□□ -0.76
NDEL1-216ENST00000583066 LRRC7Q96NW7 1537 aa10.32□□□□□ -0.76
NDEL1-216ENST00000583066 CDC42BPBQ9Y5S2 1711 aa10.31□□□□□ -0.76
NDEL1-216ENST00000583066 CLEC11AQ9Y240 323 aa10.31□□□□□ -0.76
NDEL1-216ENST00000583066 EEA1Q15075 1411 aa10.31□□□□□ -0.76
NDEL1-216ENST00000583066 PCGF6Q9BYE7 350 aa10.3□□□□□ -0.76
NDEL1-216ENST00000583066 XIRP1Q702N8 1843 aaKnown RBP10.3□□□□□ -0.76
NDEL1-216ENST00000583066 SYNMO15061 1565 aa10.3□□□□□ -0.76
NDEL1-216ENST00000583066 ABCC1P33527 1531 aa10.29□□□□□ -0.76
NDEL1-216ENST00000583066 RANGAP1P46060 587 aaPredicted RBP10.27□□□□□ -0.77
NDEL1-216ENST00000583066 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
NDEL1-216ENST00000583066 IQGAP1P46940 1657 aa10.27□□□□□ -0.77
NDEL1-216ENST00000583066 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
NDEL1-216ENST00000583066 PLXNC1O60486 1568 aa10.25□□□□□ -0.77
NDEL1-216ENST00000583066 DEPDC5O75140 1603 aa10.25□□□□□ -0.77
NDEL1-216ENST00000583066 NPHP4O75161 1426 aaPredicted RBP10.24□□□□□ -0.77
NDEL1-216ENST00000583066 PREX2Q70Z35 1606 aa10.24□□□□□ -0.77
NDEL1-216ENST00000583066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.24□□□□□ -0.77
NDEL1-216ENST00000583066 MED14O60244 1454 aa10.23□□□□□ -0.77
NDEL1-216ENST00000583066 SAMD9LQ8IVG5 1584 aa10.23□□□□□ -0.77
NDEL1-216ENST00000583066 ROBO1Q9Y6N7 1651 aa10.23□□□□□ -0.77
NDEL1-216ENST00000583066 TRIM52Q96A61 297 aa10.23□□□□□ -0.77
NDEL1-216ENST00000583066 ZC3H13Q5T200 1668 aaKnown RBP10.22□□□□□ -0.77
NDEL1-216ENST00000583066 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
NDEL1-216ENST00000583066 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
NDEL1-216ENST00000583066 LRRIQ1Q96JM4 1722 aa10.2□□□□□ -0.78
NDEL1-216ENST00000583066 LRP6O75581 1613 aa10.19□□□□□ -0.78
NDEL1-216ENST00000583066 SETBP1Q9Y6X0 1596 aa10.19□□□□□ -0.78
NDEL1-216ENST00000583066 FAM135BQ49AJ0 1406 aa10.19□□□□□ -0.78
NDEL1-216ENST00000583066 TNRQ92752 1358 aa10.19□□□□□ -0.78
NDEL1-216ENST00000583066 INO80Q9ULG1 1556 aaPredicted RBP10.18□□□□□ -0.78
NDEL1-216ENST00000583066 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
NDEL1-216ENST00000583066 FBXO31Q5XUX0 539 aaPredicted RBP10.18□□□□□ -0.78
NDEL1-216ENST00000583066 LHX8Q68G74 356 aa10.18□□□□□ -0.78
NDEL1-216ENST00000583066 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
NDEL1-216ENST00000583066 CDC42BPAQ5VT25 1732 aa10.18□□□□□ -0.78
NDEL1-216ENST00000583066 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
NDEL1-216ENST00000583066 PHLPP1O60346 1717 aa10.17□□□□□ -0.78
NDEL1-216ENST00000583066 GGT6Q6P531 493 aa10.17□□□□□ -0.78
NDEL1-216ENST00000583066 SYCP2Q9BX26 1530 aa10.17□□□□□ -0.78
NDEL1-216ENST00000583066 UGGT1Q9NYU2 1555 aa10.16□□□□□ -0.78
NDEL1-216ENST00000583066 A2MP01023 1474 aa10.16□□□□□ -0.78
NDEL1-216ENST00000583066 PLSCR2Q9NRY7 297 aa10.14□□□□□ -0.79
NDEL1-216ENST00000583066 PZPP20742 1482 aa10.13□□□□□ -0.79
NDEL1-216ENST00000583066 COL16A1Q07092 1604 aaPredicted RBP10.13□□□□□ -0.79
NDEL1-216ENST00000583066 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
NDEL1-216ENST00000583066 MAP3K1Q13233 1512 aa10.12□□□□□ -0.79
NDEL1-216ENST00000583066 ADGBQ8N7X0 1667 aa10.12□□□□□ -0.79
NDEL1-216ENST00000583066 CDK12Q9NYV4 1490 aaPredicted RBP10.11□□□□□ -0.79
NDEL1-216ENST00000583066 SPAG9O60271 1321 aaKnown RBP10.11□□□□□ -0.79
NDEL1-216ENST00000583066 CLIP1P30622 1438 aa10.11□□□□□ -0.79
NDEL1-216ENST00000583066 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
NDEL1-216ENST00000583066 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
NDEL1-216ENST00000583066 JCADQ9P266 1359 aa10.11□□□□□ -0.79
NDEL1-216ENST00000583066 NLRP1Q9C000 1473 aa10.1□□□□□ -0.79
NDEL1-216ENST00000583066 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
NDEL1-216ENST00000583066 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
NDEL1-216ENST00000583066 THEMISQ8N1K5 641 aaPredicted RBP10.1□□□□□ -0.79
NDEL1-216ENST00000583066 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
NDEL1-216ENST00000583066 RGS12O14924 1447 aa10.09□□□□□ -0.79
NDEL1-216ENST00000583066 EVX2Q03828 476 aa10.09□□□□□ -0.79
NDEL1-216ENST00000583066 MIA2Q96PC5 1412 aa10.08□□□□□ -0.8
NDEL1-216ENST00000583066 KDM5DQ9BY66 1539 aa10.08□□□□□ -0.8
NDEL1-216ENST00000583066 RXRBP28702 533 aa10.08□□□□□ -0.8
NDEL1-216ENST00000583066 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
NDEL1-216ENST00000583066 TMEM94Q12767 1356 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms