RNA–Protein interactions for RNA: ENST00000581670.1

MTCL1-216, Transcript of microtubule crosslinking factor 1, humanhuman

Gene MTCL1, Length 2,856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-216ENST00000581670 TSPY10P0CW01 314 aa12.02□□□□□ -0.48
MTCL1-216ENST00000581670 ZNF326Q5BKZ1 582 aaKnown RBP12.02□□□□□ -0.49
MTCL1-216ENST00000581670 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
MTCL1-216ENST00000581670 USP47Q96K76 1375 aa12.01□□□□□ -0.49
MTCL1-216ENST00000581670 UHRF1BP1Q6BDS2 1440 aa12.01□□□□□ -0.49
MTCL1-216ENST00000581670 PDE4CQ08493 712 aa12.01□□□□□ -0.49
MTCL1-216ENST00000581670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
MTCL1-216ENST00000581670 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
MTCL1-216ENST00000581670 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
MTCL1-216ENST00000581670 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
MTCL1-216ENST00000581670 ARHGEF12Q9NZN5 1544 aa11.99□□□□□ -0.49
MTCL1-216ENST00000581670 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
MTCL1-216ENST00000581670 FAM135AQ9P2D6 1515 aa11.98□□□□□ -0.49
MTCL1-216ENST00000581670 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 MAST1Q9Y2H9 1570 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 ABCC2Q92887 1545 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
MTCL1-216ENST00000581670 MYO5CQ9NQX4 1742 aa11.96□□□□□ -0.49
MTCL1-216ENST00000581670 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.49
MTCL1-216ENST00000581670 UNC13BO14795 1591 aa11.95□□□□□ -0.5
MTCL1-216ENST00000581670 PDIA4P13667 645 aaKnown RBP11.95□□□□□ -0.5
MTCL1-216ENST00000581670 FGD1P98174 961 aa11.95□□□□□ -0.5
MTCL1-216ENST00000581670 KDM2AQ9Y2K7 1162 aa11.94□□□□□ -0.5
MTCL1-216ENST00000581670 POLR3GLQ9BT43 218 aa11.94□□□□□ -0.5
MTCL1-216ENST00000581670 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
MTCL1-216ENST00000581670 IRX6P78412 446 aaPredicted RBP11.93□□□□□ -0.5
MTCL1-216ENST00000581670 PLXNC1O60486 1568 aa11.93□□□□□ -0.5
MTCL1-216ENST00000581670 DCAF11Q8TEB1 546 aa11.93□□□□□ -0.5
MTCL1-216ENST00000581670 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
MTCL1-216ENST00000581670 ZCCHC11Q5TAX3 1644 aaKnown RBP11.92□□□□□ -0.5
MTCL1-216ENST00000581670 PLA2R1Q13018 1463 aa11.92□□□□□ -0.5
MTCL1-216ENST00000581670 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
MTCL1-216ENST00000581670 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
MTCL1-216ENST00000581670 ARID4BQ4LE39 1312 aaPredicted RBP11.91□□□□□ -0.5
MTCL1-216ENST00000581670 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
MTCL1-216ENST00000581670 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
MTCL1-216ENST00000581670 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
MTCL1-216ENST00000581670 PLEKHH2Q8IVE3 1493 aa11.9□□□□□ -0.5
MTCL1-216ENST00000581670 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
MTCL1-216ENST00000581670 E9PCH4 1651 aa11.89□□□□□ -0.51
MTCL1-216ENST00000581670 AAMPQ13685 434 aa11.89□□□□□ -0.51
MTCL1-216ENST00000581670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.89□□□□□ -0.51
MTCL1-216ENST00000581670 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
MTCL1-216ENST00000581670 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
MTCL1-216ENST00000581670 RBM10P98175 930 aaKnown RBP11.88□□□□□ -0.51
MTCL1-216ENST00000581670 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
MTCL1-216ENST00000581670 A2MP01023 1474 aa11.87□□□□□ -0.51
MTCL1-216ENST00000581670 PLCH2O75038 1416 aa11.87□□□□□ -0.51
MTCL1-216ENST00000581670 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
MTCL1-216ENST00000581670 DUOX2Q9NRD8 1548 aa11.87□□□□□ -0.51
MTCL1-216ENST00000581670 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
MTCL1-216ENST00000581670 RTL5Q5HYW3 569 aaPredicted RBP11.86□□□□□ -0.51
MTCL1-216ENST00000581670 ABCC1P33527 1531 aa11.86□□□□□ -0.51
MTCL1-216ENST00000581670 UHRF1BP1LA0JNW5 1464 aa11.86□□□□□ -0.51
MTCL1-216ENST00000581670 NOP58Q9Y2X3 529 aaKnown RBP11.86□□□□□ -0.51
MTCL1-216ENST00000581670 RGL3Q3MIN7 710 aa11.85□□□□□ -0.51
MTCL1-216ENST00000581670 NBPF1Q3BBV0 1214 aa11.85□□□□□ -0.51
MTCL1-216ENST00000581670 TRAPPC8Q9Y2L5 1435 aa11.84□□□□□ -0.51
MTCL1-216ENST00000581670 ERBINQ96RT1 1412 aa11.84□□□□□ -0.51
MTCL1-216ENST00000581670 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
MTCL1-216ENST00000581670 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
MTCL1-216ENST00000581670 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
MTCL1-216ENST00000581670 LAMC1P11047 1609 aa11.82□□□□□ -0.52
MTCL1-216ENST00000581670 ATP10AO60312 1499 aa11.82□□□□□ -0.52
MTCL1-216ENST00000581670 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
MTCL1-216ENST00000581670 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
MTCL1-216ENST00000581670 GPRASP1Q5JY77 1395 aa11.82□□□□□ -0.52
MTCL1-216ENST00000581670 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
MTCL1-216ENST00000581670 SENP3-EIF4A1A0A087X0R7 540 aa11.81□□□□□ -0.52
MTCL1-216ENST00000581670 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
MTCL1-216ENST00000581670 EIF2AK4Q9P2K8 1649 aaKnown RBP11.79□□□□□ -0.52
MTCL1-216ENST00000581670 PPP4R2Q9NY27 417 aa11.79□□□□□ -0.52
MTCL1-216ENST00000581670 ZFYVE16Q7Z3T8 1539 aa11.79□□□□□ -0.52
MTCL1-216ENST00000581670 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
MTCL1-216ENST00000581670 RNF17Q9BXT8 1623 aaKnown RBP11.78□□□□□ -0.52
MTCL1-216ENST00000581670 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
MTCL1-216ENST00000581670 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
MTCL1-216ENST00000581670 MYBBP1AQ9BQG0 1328 aaKnown RBP11.78□□□□□ -0.52
MTCL1-216ENST00000581670 DISP3Q9P2K9 1392 aa11.78□□□□□ -0.52
MTCL1-216ENST00000581670 AFAP1Q8N556 730 aa11.77□□□□□ -0.52
MTCL1-216ENST00000581670 TESK2Q96S53 571 aa11.77□□□□□ -0.52
MTCL1-216ENST00000581670 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.52
MTCL1-216ENST00000581670 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.53
MTCL1-216ENST00000581670 RALBP1Q15311 655 aa11.77□□□□□ -0.53
MTCL1-216ENST00000581670 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
MTCL1-216ENST00000581670 PER1O15534 1290 aaPredicted RBP11.76□□□□□ -0.53
MTCL1-216ENST00000581670 KTN1Q86UP2 1357 aaKnown RBP11.76□□□□□ -0.53
MTCL1-216ENST00000581670 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
MTCL1-216ENST00000581670 DEPDC5O75140 1603 aa11.76□□□□□ -0.53
MTCL1-216ENST00000581670 SPAG9O60271 1321 aaKnown RBP11.76□□□□□ -0.53
MTCL1-216ENST00000581670 ABCA9Q8IUA7 1624 aa11.75□□□□□ -0.53
MTCL1-216ENST00000581670 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
MTCL1-216ENST00000581670 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
MTCL1-216ENST00000581670 MADDQ8WXG6 1647 aa11.75□□□□□ -0.53
MTCL1-216ENST00000581670 CEP152O94986 1710 aa11.75□□□□□ -0.53
MTCL1-216ENST00000581670 SPHKAPQ2M3C7 1700 aa11.75□□□□□ -0.53
MTCL1-216ENST00000581670 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms