RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
RIOK3-204ENST00000581220 CARD11Q9BXL7 1154 aa11.39□□□□□ -0.59
RIOK3-204ENST00000581220 KTN1Q86UP2 1357 aaKnown RBP11.39□□□□□ -0.59
RIOK3-204ENST00000581220 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
RIOK3-204ENST00000581220 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
RIOK3-204ENST00000581220 CAMSAP2Q08AD1 1489 aa11.39□□□□□ -0.59
RIOK3-204ENST00000581220 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
RIOK3-204ENST00000581220 RALBP1Q15311 655 aa11.38□□□□□ -0.59
RIOK3-204ENST00000581220 ITSN2Q9NZM3 1697 aa11.38□□□□□ -0.59
RIOK3-204ENST00000581220 BRD4O60885 1362 aaPredicted RBP11.38□□□□□ -0.59
RIOK3-204ENST00000581220 ANKRD30AQ9BXX3 1397 aa11.38□□□□□ -0.59
RIOK3-204ENST00000581220 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
RIOK3-204ENST00000581220 MYBBP1AQ9BQG0 1328 aaKnown RBP11.38□□□□□ -0.59
RIOK3-204ENST00000581220 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
RIOK3-204ENST00000581220 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
RIOK3-204ENST00000581220 LRPPRCP42704 1394 aaKnown RBP11.37□□□□□ -0.59
RIOK3-204ENST00000581220 UHRF1BP1Q6BDS2 1440 aa11.37□□□□□ -0.59
RIOK3-204ENST00000581220 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
RIOK3-204ENST00000581220 RRP1P56182 461 aaKnown RBP11.36□□□□□ -0.59
RIOK3-204ENST00000581220 ADGRL2O95490 1459 aa11.36□□□□□ -0.59
RIOK3-204ENST00000581220 TROQ12816 1431 aaPredicted RBP11.36□□□□□ -0.59
RIOK3-204ENST00000581220 FBLN2P98095 1184 aa11.36□□□□□ -0.59
RIOK3-204ENST00000581220 DISP1Q96F81 1524 aa11.35□□□□□ -0.59
RIOK3-204ENST00000581220 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
RIOK3-204ENST00000581220 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
RIOK3-204ENST00000581220 ADAMTSL3P82987 1691 aa11.34□□□□□ -0.59
RIOK3-204ENST00000581220 CROCC2H7BZ55 1655 aa11.34□□□□□ -0.59
RIOK3-204ENST00000581220 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
RIOK3-204ENST00000581220 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
RIOK3-204ENST00000581220 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
RIOK3-204ENST00000581220 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
RIOK3-204ENST00000581220 ANKRD50Q9ULJ7 1429 aa11.34□□□□□ -0.59
RIOK3-204ENST00000581220 ARHGEF12Q9NZN5 1544 aa11.33□□□□□ -0.6
RIOK3-204ENST00000581220 GPATCH8Q9UKJ3 1502 aaKnown RBP11.33□□□□□ -0.6
RIOK3-204ENST00000581220 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
RIOK3-204ENST00000581220 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
RIOK3-204ENST00000581220 NUP155O75694 1391 aa11.32□□□□□ -0.6
RIOK3-204ENST00000581220 MS4A1P11836 297 aa11.32□□□□□ -0.6
RIOK3-204ENST00000581220 PDE4AP27815 886 aa11.32□□□□□ -0.6
RIOK3-204ENST00000581220 NLRP13Q86W25 1043 aa11.31□□□□□ -0.6
RIOK3-204ENST00000581220 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
RIOK3-204ENST00000581220 GRIN2AQ12879 1464 aa11.3□□□□□ -0.6
RIOK3-204ENST00000581220 ADCY10Q96PN6 1610 aa11.3□□□□□ -0.6
RIOK3-204ENST00000581220 MAP3K4Q9Y6R4 1608 aa11.3□□□□□ -0.6
RIOK3-204ENST00000581220 DCAF11Q8TEB1 546 aa11.3□□□□□ -0.6
RIOK3-204ENST00000581220 PLB1Q6P1J6 1458 aa11.3□□□□□ -0.6
RIOK3-204ENST00000581220 TSPOAP1O95153 1857 aa11.3□□□□□ -0.6
RIOK3-204ENST00000581220 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
RIOK3-204ENST00000581220 USP35Q9P2H5 1018 aa11.29□□□□□ -0.6
RIOK3-204ENST00000581220 E9PCH4 1651 aa11.29□□□□□ -0.6
RIOK3-204ENST00000581220 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
RIOK3-204ENST00000581220 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
RIOK3-204ENST00000581220 PPM1GO15355 546 aaPredicted RBP11.27□□□□□ -0.6
RIOK3-204ENST00000581220 C9orf84Q5VXU9 1444 aa11.27□□□□□ -0.61
RIOK3-204ENST00000581220 NEFMP07197 916 aa11.27□□□□□ -0.61
RIOK3-204ENST00000581220 PARD3Q8TEW0 1356 aa11.27□□□□□ -0.61
RIOK3-204ENST00000581220 SHANK2Q9UPX8 1470 aa11.26□□□□□ -0.61
RIOK3-204ENST00000581220 KDM5DQ9BY66 1539 aa11.26□□□□□ -0.61
RIOK3-204ENST00000581220 LAS1LQ9Y4W2 734 aaKnown RBP11.26□□□□□ -0.61
RIOK3-204ENST00000581220 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
RIOK3-204ENST00000581220 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
RIOK3-204ENST00000581220 PTPRMP28827 1452 aa11.24□□□□□ -0.61
RIOK3-204ENST00000581220 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
RIOK3-204ENST00000581220 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
RIOK3-204ENST00000581220 CDC42BPAQ5VT25 1732 aa11.23□□□□□ -0.61
RIOK3-204ENST00000581220 CARMIL2Q6F5E8 1435 aa11.23□□□□□ -0.61
RIOK3-204ENST00000581220 INSRP06213 1382 aa11.23□□□□□ -0.61
RIOK3-204ENST00000581220 PTPRGP23470 1445 aa11.22□□□□□ -0.61
RIOK3-204ENST00000581220 PLIN1O60240 522 aa11.21□□□□□ -0.61
RIOK3-204ENST00000581220 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.62
RIOK3-204ENST00000581220 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.62
RIOK3-204ENST00000581220 CRBNQ96SW2 442 aa11.21□□□□□ -0.62
RIOK3-204ENST00000581220 TRPM1Q7Z4N2 1603 aa11.21□□□□□ -0.62
RIOK3-204ENST00000581220 PRAG1Q86YV5 1406 aa11.21□□□□□ -0.62
RIOK3-204ENST00000581220 ZMYM4Q5VZL5 1548 aa11.2□□□□□ -0.62
RIOK3-204ENST00000581220 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
RIOK3-204ENST00000581220 DAXXQ9UER7 740 aaPredicted RBP11.2□□□□□ -0.62
RIOK3-204ENST00000581220 PLEKHH2Q8IVE3 1493 aa11.2□□□□□ -0.62
RIOK3-204ENST00000581220 BLMP54132 1417 aaPredicted RBP11.2□□□□□ -0.62
RIOK3-204ENST00000581220 HNRNPMP52272 730 aaKnown RBP eCLIP11.19□□□□□ -0.62
RIOK3-204ENST00000581220 RGL3Q3MIN7 710 aa11.18□□□□□ -0.62
RIOK3-204ENST00000581220 FAM135AQ9P2D6 1515 aa11.18□□□□□ -0.62
RIOK3-204ENST00000581220 PANK3Q9H999 370 aa11.18□□□□□ -0.62
RIOK3-204ENST00000581220 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
RIOK3-204ENST00000581220 UHRF1BP1LA0JNW5 1464 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 COL17A1Q9UMD9 1497 aaPredicted RBP11.17□□□□□ -0.62
RIOK3-204ENST00000581220 ARHGEF5Q12774 1597 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 IL27Q8NEV9 243 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 TMF1P82094 1093 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 GPRASP1Q5JY77 1395 aa11.17□□□□□ -0.62
RIOK3-204ENST00000581220 LAMC1P11047 1609 aa11.16□□□□□ -0.62
RIOK3-204ENST00000581220 RSPH4AQ5TD94 716 aa11.16□□□□□ -0.62
RIOK3-204ENST00000581220 CENPQQ7L2Z9 268 aaPredicted RBP11.16□□□□□ -0.62
RIOK3-204ENST00000581220 ATP10BO94823 1461 aa11.15□□□□□ -0.62
RIOK3-204ENST00000581220 ERBINQ96RT1 1412 aa11.15□□□□□ -0.62
RIOK3-204ENST00000581220 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.14□□□□□ -0.63
RIOK3-204ENST00000581220 TESK2Q96S53 571 aa11.14□□□□□ -0.63
RIOK3-204ENST00000581220 PTPRTO14522 1441 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms