RNA–Protein interactions for RNA: ENST00000580732.6

GREB1L-209, Transcript of GREB1 like retinoic acid receptor coactivator, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GREB1L, Length 8,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1L-209ENST00000580732 CUX1P39880 1505 aa13.58□□□□□ -0.24
GREB1L-209ENST00000580732 ZNF771Q7L3S4 317 aaPredicted RBP13.58□□□□□ -0.24
GREB1L-209ENST00000580732 GZF1Q9H116 711 aaPredicted RBP13.58□□□□□ -0.24
GREB1L-209ENST00000580732 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
GREB1L-209ENST00000580732 TMX4Q9H1E5 349 aaPredicted RBP13.58□□□□□ -0.24
GREB1L-209ENST00000580732 ERCC4Q92889 916 aaPredicted RBP13.58□□□□□ -0.24
GREB1L-209ENST00000580732 TAF3Q5VWG9 929 aa13.58□□□□□ -0.24
GREB1L-209ENST00000580732 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
GREB1L-209ENST00000580732 BECN2A8MW95 431 aa13.57□□□□□ -0.24
GREB1L-209ENST00000580732 LETM1O95202 739 aaPredicted RBP13.57□□□□□ -0.24
GREB1L-209ENST00000580732 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
GREB1L-209ENST00000580732 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
GREB1L-209ENST00000580732 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
GREB1L-209ENST00000580732 KIF7Q2M1P5 1343 aa13.56□□□□□ -0.24
GREB1L-209ENST00000580732 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
GREB1L-209ENST00000580732 RASSF8Q8NHQ8 419 aa13.56□□□□□ -0.24
GREB1L-209ENST00000580732 RUFY2Q8WXA3 655 aa13.56□□□□□ -0.24
GREB1L-209ENST00000580732 NAT10Q9H0A0 1025 aaKnown RBP13.56□□□□□ -0.24
GREB1L-209ENST00000580732 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
GREB1L-209ENST00000580732 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
GREB1L-209ENST00000580732 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
GREB1L-209ENST00000580732 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
GREB1L-209ENST00000580732 HSP90B2PQ58FF3 399 aa13.55□□□□□ -0.24
GREB1L-209ENST00000580732 CCDC47Q96A33 483 aaKnown RBP13.55□□□□□ -0.24
GREB1L-209ENST00000580732 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
GREB1L-209ENST00000580732 NUCB2P80303 420 aa13.55□□□□□ -0.24
GREB1L-209ENST00000580732 TPD52L1Q16890 204 aaPredicted RBP13.55□□□□□ -0.24
GREB1L-209ENST00000580732 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
GREB1L-209ENST00000580732 H3BQV1 296 aa13.54□□□□□ -0.24
GREB1L-209ENST00000580732 RDXP35241 583 aaKnown RBP13.54□□□□□ -0.24
GREB1L-209ENST00000580732 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
GREB1L-209ENST00000580732 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
GREB1L-209ENST00000580732 E9PSI1 815 aa13.54□□□□□ -0.24
GREB1L-209ENST00000580732 CAVIN1Q6NZI2 390 aaKnown RBP13.54□□□□□ -0.24
GREB1L-209ENST00000580732 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
GREB1L-209ENST00000580732 RUFY1Q96T51 708 aa13.53□□□□□ -0.24
GREB1L-209ENST00000580732 CCDC39Q9UFE4 941 aa13.53□□□□□ -0.24
GREB1L-209ENST00000580732 TRIM6-TRIM34B2RNG4 842 aa13.53□□□□□ -0.24
GREB1L-209ENST00000580732 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
GREB1L-209ENST00000580732 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
GREB1L-209ENST00000580732 TOP2AP11388 1531 aaKnown RBP13.53□□□□□ -0.24
GREB1L-209ENST00000580732 GORABQ5T7V8 394 aa13.52□□□□□ -0.24
GREB1L-209ENST00000580732 FAM43AQ8N2R8 423 aa13.52□□□□□ -0.25
GREB1L-209ENST00000580732 CUX2O14529 1486 aa13.52□□□□□ -0.25
GREB1L-209ENST00000580732 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
GREB1L-209ENST00000580732 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
GREB1L-209ENST00000580732 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
GREB1L-209ENST00000580732 NINLQ9Y2I6 1382 aa13.51□□□□□ -0.25
GREB1L-209ENST00000580732 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
GREB1L-209ENST00000580732 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
GREB1L-209ENST00000580732 RNF20Q5VTR2 975 aa13.5□□□□□ -0.25
GREB1L-209ENST00000580732 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
GREB1L-209ENST00000580732 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
GREB1L-209ENST00000580732 CHMP5Q9NZZ3 219 aa13.49□□□□□ -0.25
GREB1L-209ENST00000580732 KCNH8Q96L42 1107 aa13.49□□□□□ -0.25
GREB1L-209ENST00000580732 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
GREB1L-209ENST00000580732 TXLNBQ8N3L3 684 aa13.49□□□□□ -0.25
GREB1L-209ENST00000580732 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
GREB1L-209ENST00000580732 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
GREB1L-209ENST00000580732 MRE11P49959 708 aa13.48□□□□□ -0.25
GREB1L-209ENST00000580732 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
GREB1L-209ENST00000580732 FAM184AQ8NB25 1140 aa13.48□□□□□ -0.25
GREB1L-209ENST00000580732 AKAP17AQ02040 695 aaKnown RBP13.48□□□□□ -0.25
GREB1L-209ENST00000580732 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
GREB1L-209ENST00000580732 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.25
GREB1L-209ENST00000580732 PDE4AP27815 886 aa13.46□□□□□ -0.25
GREB1L-209ENST00000580732 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
GREB1L-209ENST00000580732 SYNE3Q6ZMZ3 975 aa13.46□□□□□ -0.25
GREB1L-209ENST00000580732 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
GREB1L-209ENST00000580732 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.45□□□□□ -0.26
GREB1L-209ENST00000580732 TRIM29Q14134 588 aa13.45□□□□□ -0.26
GREB1L-209ENST00000580732 MBD3O95983 291 aa13.45□□□□□ -0.26
GREB1L-209ENST00000580732 CCDC144AA2RUR9 1427 aa13.45□□□□□ -0.26
GREB1L-209ENST00000580732 AMOTL1Q8IY63 956 aa13.45□□□□□ -0.26
GREB1L-209ENST00000580732 NUP155O75694 1391 aa13.45□□□□□ -0.26
GREB1L-209ENST00000580732 USP8P40818 1118 aa13.44□□□□□ -0.26
GREB1L-209ENST00000580732 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
GREB1L-209ENST00000580732 MCM2P49736 904 aa13.44□□□□□ -0.26
GREB1L-209ENST00000580732 PIP4K2AP48426 406 aaPredicted RBP13.43□□□□□ -0.26
GREB1L-209ENST00000580732 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
GREB1L-209ENST00000580732 PKD2Q13563 968 aa13.43□□□□□ -0.26
GREB1L-209ENST00000580732 ZRSR2Q15696 482 aaKnown RBP13.43□□□□□ -0.26
GREB1L-209ENST00000580732 MPHOSPH9Q99550 1183 aa13.43□□□□□ -0.26
GREB1L-209ENST00000580732 MNS1Q8NEH6 495 aa13.43□□□□□ -0.26
GREB1L-209ENST00000580732 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
GREB1L-209ENST00000580732 TSPYL1Q9H0U9 437 aa13.43□□□□□ -0.26
GREB1L-209ENST00000580732 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
GREB1L-209ENST00000580732 HOMER1Q86YM7 354 aa13.42□□□□□ -0.26
GREB1L-209ENST00000580732 GOLGA6L7A0A1B0GV03 622 aa13.42□□□□□ -0.26
GREB1L-209ENST00000580732 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
GREB1L-209ENST00000580732 ABCC8Q09428 1581 aa13.41□□□□□ -0.26
GREB1L-209ENST00000580732 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
GREB1L-209ENST00000580732 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
GREB1L-209ENST00000580732 SASS6Q6UVJ0 657 aa13.41□□□□□ -0.26
GREB1L-209ENST00000580732 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
GREB1L-209ENST00000580732 RAPGEF2Q9Y4G8 1499 aa13.4□□□□□ -0.26
GREB1L-209ENST00000580732 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.26
GREB1L-209ENST00000580732 PDCP20941 246 aa13.4□□□□□ -0.26
GREB1L-209ENST00000580732 LEKR1Q6ZMV7 388 aa13.39□□□□□ -0.27
GREB1L-209ENST00000580732 MARCH6O60337 910 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms