RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 DUOX2Q9NRD8 1548 aa31.1■■■□□ 2.57
SMG8-204ENST00000580498 DNMT1P26358 1616 aaKnown RBP31.08■■■□□ 2.57
SMG8-204ENST00000580498 DAPK1P53355 1430 aa31.07■■■□□ 2.57
SMG8-204ENST00000580498 PTPRKQ15262 1439 aa31.07■■■□□ 2.57
SMG8-204ENST00000580498 ABCC5O15440 1437 aa31.07■■■□□ 2.56
SMG8-204ENST00000580498 KIF15Q9NS87 1388 aa31.05■■■□□ 2.56
SMG8-204ENST00000580498 FAM50AQ14320 339 aaKnown RBP31.04■■■□□ 2.56
SMG8-204ENST00000580498 RNF17Q9BXT8 1623 aaKnown RBP31.04■■■□□ 2.56
SMG8-204ENST00000580498 ANKRD30AQ9BXX3 1397 aa31.03■■■□□ 2.56
SMG8-204ENST00000580498 ZC3H13Q5T200 1668 aaKnown RBP31.02■■■□□ 2.56
SMG8-204ENST00000580498 MYO3AQ8NEV4 1616 aa31.02■■■□□ 2.56
SMG8-204ENST00000580498 RRP7BPQ9NSQ0 103 aa31.01■■■□□ 2.55
SMG8-204ENST00000580498 PZPP20742 1482 aa31.01■■■□□ 2.55
SMG8-204ENST00000580498 ERBINQ96RT1 1412 aa31■■■□□ 2.55
SMG8-204ENST00000580498 ZNF142P52746 1687 aaPredicted RBP30.98■■■□□ 2.55
SMG8-204ENST00000580498 ILDR1Q86SU0 546 aaPredicted RBP30.98■■■□□ 2.55
SMG8-204ENST00000580498 CEP170BQ9Y4F5 1589 aaPredicted RBP30.97■■■□□ 2.55
SMG8-204ENST00000580498 TNRQ92752 1358 aa30.96■■■□□ 2.55
SMG8-204ENST00000580498 STRCQ7RTU9 1775 aa30.96■■■□□ 2.55
SMG8-204ENST00000580498 CHIC2Q9UKJ5 165 aa30.95■■■□□ 2.55
SMG8-204ENST00000580498 CAMSAP1Q5T5Y3 1602 aa30.95■■■□□ 2.54
SMG8-204ENST00000580498 NCOA1Q15788 1441 aa30.94■■■□□ 2.54
SMG8-204ENST00000580498 KANK1Q14678 1352 aa30.93■■■□□ 2.54
SMG8-204ENST00000580498 PTPRTO14522 1441 aa30.93■■■□□ 2.54
SMG8-204ENST00000580498 A2ML1A8K2U0 1454 aa30.92■■■□□ 2.54
SMG8-204ENST00000580498 ABCC3O15438 1527 aa30.92■■■□□ 2.54
SMG8-204ENST00000580498 PKD2Q13563 968 aa30.89■■■□□ 2.54
SMG8-204ENST00000580498 FBXO41Q8TF61 875 aa30.89■■■□□ 2.54
SMG8-204ENST00000580498 PLA2R1Q13018 1463 aa30.89■■■□□ 2.53
SMG8-204ENST00000580498 FBXO31Q5XUX0 539 aaPredicted RBP30.88■■■□□ 2.53
SMG8-204ENST00000580498 NLRP1Q9C000 1473 aa30.86■■■□□ 2.53
SMG8-204ENST00000580498 PRDM15P57071 1507 aaPredicted RBP30.85■■■□□ 2.53
SMG8-204ENST00000580498 ADGRL2O95490 1459 aa30.85■■■□□ 2.53
SMG8-204ENST00000580498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.85■■■□□ 2.53
SMG8-204ENST00000580498 CEP152O94986 1710 aa30.84■■■□□ 2.53
SMG8-204ENST00000580498 MROH1Q8NDA8 1641 aa30.84■■■□□ 2.53
SMG8-204ENST00000580498 CERKQ8TCT0 537 aa30.82■■■□□ 2.52
SMG8-204ENST00000580498 THEMISQ8N1K5 641 aaPredicted RBP30.8■■■□□ 2.52
SMG8-204ENST00000580498 DEPDC5O75140 1603 aa30.79■■■□□ 2.52
SMG8-204ENST00000580498 NCKAP5LQ9HCH0 1330 aa30.78■■■□□ 2.52
SMG8-204ENST00000580498 SPATA31D1Q6ZQQ2 1576 aa30.77■■■□□ 2.52
SMG8-204ENST00000580498 ERVK-7P63135 1459 aa30.76■■■□□ 2.52
SMG8-204ENST00000580498 UGGT1Q9NYU2 1555 aa30.75■■■□□ 2.51
SMG8-204ENST00000580498 ARHGAP31Q2M1Z3 1444 aa30.75■■■□□ 2.51
SMG8-204ENST00000580498 PPARGC1BQ86YN6 1023 aaKnown RBP30.75■■■□□ 2.51
SMG8-204ENST00000580498 ANKRD50Q9ULJ7 1429 aa30.74■■■□□ 2.51
SMG8-204ENST00000580498 CFAP65Q6ZU64 1925 aaKnown RBP30.73■■■□□ 2.51
SMG8-204ENST00000580498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.72■■■□□ 2.51
SMG8-204ENST00000580498 ANKLE2Q86XL3 938 aa30.72■■■□□ 2.51
SMG8-204ENST00000580498 POLR1AO95602 1720 aaPredicted RBP30.7■■■□□ 2.5
SMG8-204ENST00000580498 ROCK1Q13464 1354 aa30.69■■■□□ 2.5
SMG8-204ENST00000580498 ITGAEP38570 1179 aa30.67■■■□□ 2.5
SMG8-204ENST00000580498 LMTK2Q8IWU2 1503 aa30.67■■■□□ 2.5
SMG8-204ENST00000580498 STAG3Q9UJ98 1225 aa30.63■■■□□ 2.49
SMG8-204ENST00000580498 VWDEQ8N2E2 1590 aa30.62■■■□□ 2.49
SMG8-204ENST00000580498 EFCAB6Q5THR3 1501 aa30.58■■■□□ 2.49
SMG8-204ENST00000580498 IQSEC2Q5JU85 1478 aa30.57■■■□□ 2.48
SMG8-204ENST00000580498 RPRD2Q5VT52 1461 aaKnown RBP30.56■■■□□ 2.48
SMG8-204ENST00000580498 LTBP4Q8N2S1 1624 aa30.55■■■□□ 2.48
SMG8-204ENST00000580498 ZNF335Q9H4Z2 1342 aaPredicted RBP30.54■■■□□ 2.48
SMG8-204ENST00000580498 UBR1Q8IWV7 1749 aa30.54■■■□□ 2.48
SMG8-204ENST00000580498 EID1Q9Y6B2 187 aa30.54■■■□□ 2.48
SMG8-204ENST00000580498 NPHP4O75161 1426 aaPredicted RBP30.54■■■□□ 2.48
SMG8-204ENST00000580498 RRBP1Q9P2E9 1410 aaKnown RBP30.53■■■□□ 2.48
SMG8-204ENST00000580498 UNC13BO14795 1591 aa30.53■■■□□ 2.48
SMG8-204ENST00000580498 NEURL4Q96JN8 1562 aa30.52■■■□□ 2.48
SMG8-204ENST00000580498 TET3O43151 1660 aa30.52■■■□□ 2.48
SMG8-204ENST00000580498 MED14O60244 1454 aa30.5■■■□□ 2.47
SMG8-204ENST00000580498 SLC52A1Q9NWF4 448 aa30.5■■■□□ 2.47
SMG8-204ENST00000580498 IQGAP1P46940 1657 aa30.49■■■□□ 2.47
SMG8-204ENST00000580498 GCC2Q8IWJ2 1684 aa30.49■■■□□ 2.47
SMG8-204ENST00000580498 PIK3C2BO00750 1634 aa30.47■■■□□ 2.47
SMG8-204ENST00000580498 KDM5AP29375 1690 aaKnown RBP30.47■■■□□ 2.47
SMG8-204ENST00000580498 SCAF11Q99590 1463 aaKnown RBP30.46■■■□□ 2.47
SMG8-204ENST00000580498 NOS1P29475 1434 aa30.46■■■□□ 2.47
SMG8-204ENST00000580498 TXNDC2Q86VQ3 553 aa30.45■■■□□ 2.47
SMG8-204ENST00000580498 NUP155O75694 1391 aa30.44■■■□□ 2.46
SMG8-204ENST00000580498 CPS1P31327 1500 aa30.44■■■□□ 2.46
SMG8-204ENST00000580498 SLIT1O75093 1534 aa30.43■■■□□ 2.46
SMG8-204ENST00000580498 IDI1Q13907 227 aa30.43■■■□□ 2.46
SMG8-204ENST00000580498 IQGAP3Q86VI3 1631 aa30.42■■■□□ 2.46
SMG8-204ENST00000580498 SYNMO15061 1565 aa30.41■■■□□ 2.46
SMG8-204ENST00000580498 ARHGAP23Q9P227 1491 aa30.41■■■□□ 2.46
SMG8-204ENST00000580498 TMEM2Q9UHN6 1383 aa30.4■■■□□ 2.46
SMG8-204ENST00000580498 HDGFP51858 240 aaKnown RBP30.38■■■□□ 2.45
SMG8-204ENST00000580498 ADGRB3O60242 1522 aa30.37■■■□□ 2.45
SMG8-204ENST00000580498 UBAP1LF5GYI3 381 aa30.33■■■□□ 2.45
SMG8-204ENST00000580498 E9PCH4 1651 aa30.33■■■□□ 2.45
SMG8-204ENST00000580498 LTKP29376 864 aa30.32■■■□□ 2.44
SMG8-204ENST00000580498 CHGAP10645 457 aaKnown RBP30.3■■■□□ 2.44
SMG8-204ENST00000580498 BCANQ96GW7 911 aa30.29■■■□□ 2.44
SMG8-204ENST00000580498 PPP1R15AO75807 674 aaPredicted RBP30.28■■■□□ 2.44
SMG8-204ENST00000580498 TOM1O60784 492 aa30.26■■■□□ 2.43
SMG8-204ENST00000580498 NAIPQ13075 1403 aa30.26■■■□□ 2.43
SMG8-204ENST00000580498 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.24■■■□□ 2.43
SMG8-204ENST00000580498 HFM1A2PYH4 1435 aa30.23■■■□□ 2.43
SMG8-204ENST00000580498 TRIM52Q96A61 297 aa30.22■■■□□ 2.43
SMG8-204ENST00000580498 SCAF1Q9H7N4 1312 aaKnown RBP30.2■■■□□ 2.42
SMG8-204ENST00000580498 TMEM131LA2VDJ0 1609 aa30.19■■■□□ 2.42
SMG8-204ENST00000580498 RIMS2Q9UQ26 1411 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms