RNA–Protein interactions for RNA: ENST00000580465.5

BPTF-213, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-213ENST00000580465 STAG3Q9UJ98 1225 aa8.27□□□□□ -1.09
BPTF-213ENST00000580465 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
BPTF-213ENST00000580465 IRF6O14896 467 aa8.25□□□□□ -1.09
BPTF-213ENST00000580465 RBM25P49756 843 aaKnown RBP8.25□□□□□ -1.09
BPTF-213ENST00000580465 RINLQ6ZS11 566 aa8.25□□□□□ -1.09
BPTF-213ENST00000580465 NGEFQ8N5V2 710 aa8.25□□□□□ -1.09
BPTF-213ENST00000580465 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
BPTF-213ENST00000580465 RAI14Q9P0K7 980 aa8.25□□□□□ -1.09
BPTF-213ENST00000580465 KCTD17Q8N5Z5 321 aa8.24□□□□□ -1.09
BPTF-213ENST00000580465 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.24□□□□□ -1.09
BPTF-213ENST00000580465 LOC102724159A0A0B4J2E5 919 aa8.23□□□□□ -1.09
BPTF-213ENST00000580465 ABCB7O75027 752 aa8.23□□□□□ -1.09
BPTF-213ENST00000580465 MAP2K1Q02750 393 aaPredicted RBP8.23□□□□□ -1.09
BPTF-213ENST00000580465 PWP2Q15269 919 aaKnown RBP8.23□□□□□ -1.09
BPTF-213ENST00000580465 NBPF10Q6P3W6 841 aaKnown RBP8.23□□□□□ -1.09
BPTF-213ENST00000580465 SGSM3Q96HU1 749 aa8.23□□□□□ -1.09
BPTF-213ENST00000580465 BSDC1Q9NW68 430 aaPredicted RBP8.23□□□□□ -1.09
BPTF-213ENST00000580465 MTMR7Q9Y216 660 aa8.23□□□□□ -1.09
BPTF-213ENST00000580465 ZCCHC6Q5VYS8 1495 aaKnown RBP8.23□□□□□ -1.09
BPTF-213ENST00000580465 NRDCO43847 1150 aa8.22□□□□□ -1.09
BPTF-213ENST00000580465 ITGAEP38570 1179 aa8.22□□□□□ -1.09
BPTF-213ENST00000580465 SSR1P43307 286 aaKnown RBP8.22□□□□□ -1.09
BPTF-213ENST00000580465 SATB1Q01826 763 aa8.22□□□□□ -1.09
BPTF-213ENST00000580465 CCDC96Q2M329 555 aa8.22□□□□□ -1.09
BPTF-213ENST00000580465 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
BPTF-213ENST00000580465 NBPF5PQ86XG9 351 aaPredicted RBP8.22□□□□□ -1.09
BPTF-213ENST00000580465 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
BPTF-213ENST00000580465 E9PSI1 815 aa8.21□□□□□ -1.09
BPTF-213ENST00000580465 SPDYE2BA6NHP3 402 aa8.21□□□□□ -1.1
BPTF-213ENST00000580465 ZNF500O60304 480 aaPredicted RBP8.21□□□□□ -1.1
BPTF-213ENST00000580465 ECM2O94769 699 aaPredicted RBP8.21□□□□□ -1.1
BPTF-213ENST00000580465 SPDYE6P0CI01 402 aa8.21□□□□□ -1.1
BPTF-213ENST00000580465 TERF1P54274 439 aa8.21□□□□□ -1.1
BPTF-213ENST00000580465 SPDYE2Q495Y8 402 aa8.21□□□□□ -1.1
BPTF-213ENST00000580465 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
BPTF-213ENST00000580465 SPTY2D1Q68D10 685 aaPredicted RBP8.2□□□□□ -1.1
BPTF-213ENST00000580465 SSUH2Q9Y2M2 353 aa8.2□□□□□ -1.1
BPTF-213ENST00000580465 BANK1Q8NDB2 785 aa8.19□□□□□ -1.1
BPTF-213ENST00000580465 GOLIM4O00461 696 aa8.19□□□□□ -1.1
BPTF-213ENST00000580465 SETDB1Q15047 1291 aa8.19□□□□□ -1.1
BPTF-213ENST00000580465 ZKSCAN8Q15776 578 aaPredicted RBP8.19□□□□□ -1.1
BPTF-213ENST00000580465 FRAT1Q92837 279 aaPredicted RBP8.19□□□□□ -1.1
BPTF-213ENST00000580465 CADPSQ9ULU8 1353 aa8.18□□□□□ -1.1
BPTF-213ENST00000580465 ZSCAN20P17040 1043 aaPredicted RBP8.18□□□□□ -1.1
BPTF-213ENST00000580465 LMOD3Q0VAK6 560 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
BPTF-213ENST00000580465 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.17□□□□□ -1.1
BPTF-213ENST00000580465 FOXD4L4Q8WXT5 416 aaPredicted RBP8.17□□□□□ -1.1
BPTF-213ENST00000580465 MKL1Q969V6 931 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 RBM28Q9NW13 759 aaKnown RBP8.17□□□□□ -1.1
BPTF-213ENST00000580465 RIPOR2Q9Y4F9 1068 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 HDAC1Q13547 482 aaPredicted RBP8.17□□□□□ -1.1
BPTF-213ENST00000580465 MYBPC2Q14324 1141 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 L1TD1Q5T7N2 865 aaKnown RBP8.17□□□□□ -1.1
BPTF-213ENST00000580465 MPNDQ8N594 471 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 TSPYL1Q9H0U9 437 aa8.17□□□□□ -1.1
BPTF-213ENST00000580465 FOXD4L6Q3SYB3 417 aaPredicted RBP8.16□□□□□ -1.1
BPTF-213ENST00000580465 FOXD4L3Q6VB84 417 aaPredicted RBP8.16□□□□□ -1.1
BPTF-213ENST00000580465 P3H3Q8IVL6 736 aa8.16□□□□□ -1.1
BPTF-213ENST00000580465 TSPAN18Q96SJ8 248 aa8.16□□□□□ -1.1
BPTF-213ENST00000580465 C1orf115Q9H7X2 142 aa8.16□□□□□ -1.1
BPTF-213ENST00000580465 DSG3P32926 999 aa8.15□□□□□ -1.1
BPTF-213ENST00000580465 MTA1Q13330 715 aa8.15□□□□□ -1.1
BPTF-213ENST00000580465 AEBP1Q8IUX7 1158 aa8.15□□□□□ -1.1
BPTF-213ENST00000580465 CFAP65Q6ZU64 1925 aaKnown RBP8.15□□□□□ -1.1
BPTF-213ENST00000580465 ANKRD23Q86SG2 305 aa8.15□□□□□ -1.11
BPTF-213ENST00000580465 IRX5P78411 483 aaPredicted RBP8.13□□□□□ -1.11
BPTF-213ENST00000580465 ARMCX6Q7L4S7 300 aa8.13□□□□□ -1.11
BPTF-213ENST00000580465 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
BPTF-213ENST00000580465 CEP83Q9Y592 693 aa8.13□□□□□ -1.11
BPTF-213ENST00000580465 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
BPTF-213ENST00000580465 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
BPTF-213ENST00000580465 SDR16C5Q8N3Y7 309 aa8.12□□□□□ -1.11
BPTF-213ENST00000580465 ZNF513Q8N8E2 541 aaPredicted RBP8.12□□□□□ -1.11
BPTF-213ENST00000580465 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
BPTF-213ENST00000580465 MRVI1Q9Y6F6 885 aa8.12□□□□□ -1.11
BPTF-213ENST00000580465 IGF1RP08069 1367 aa8.12□□□□□ -1.11
BPTF-213ENST00000580465 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
BPTF-213ENST00000580465 PRR29P0C7W0 189 aa8.11□□□□□ -1.11
BPTF-213ENST00000580465 CALRP27797 417 aaKnown RBP8.11□□□□□ -1.11
BPTF-213ENST00000580465 PABPN1Q86U42 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
BPTF-213ENST00000580465 FEZ2Q9UHY8 353 aaPredicted RBP8.11□□□□□ -1.11
BPTF-213ENST00000580465 ESPNB1AK53 854 aa8.11□□□□□ -1.11
BPTF-213ENST00000580465 RGL2O15211 777 aa8.11□□□□□ -1.11
BPTF-213ENST00000580465 MSL3Q8N5Y2 521 aaKnown RBP8.11□□□□□ -1.11
BPTF-213ENST00000580465 RGL3Q3MIN7 710 aa8.1□□□□□ -1.11
BPTF-213ENST00000580465 MYCBPQ99417 103 aaPredicted RBP8.1□□□□□ -1.11
BPTF-213ENST00000580465 POLD1P28340 1107 aa8.1□□□□□ -1.11
BPTF-213ENST00000580465 NME8Q8N427 588 aa8.1□□□□□ -1.11
BPTF-213ENST00000580465 ARHGEF1Q92888 912 aaKnown RBP8.1□□□□□ -1.11
BPTF-213ENST00000580465 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
BPTF-213ENST00000580465 CCDC172P0C7W6 258 aa8.09□□□□□ -1.11
BPTF-213ENST00000580465 ITFG2Q969R8 447 aa8.09□□□□□ -1.11
BPTF-213ENST00000580465 CCDC94Q9BW85 323 aaPredicted RBP8.09□□□□□ -1.11
BPTF-213ENST00000580465 BRD1O95696 1058 aa8.08□□□□□ -1.12
BPTF-213ENST00000580465 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
BPTF-213ENST00000580465 FAM210AQ96ND0 272 aa8.08□□□□□ -1.12
BPTF-213ENST00000580465 MYH16Q9H6N6 1097 aa8.08□□□□□ -1.12
BPTF-213ENST00000580465 PPP4R2Q9NY27 417 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms