RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
LINC00271-206ENST00000579944 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
LINC00271-206ENST00000579944 MFSD10Q14728 455 aa10.82□□□□□ -0.68
LINC00271-206ENST00000579944 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
LINC00271-206ENST00000579944 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
LINC00271-206ENST00000579944 TYW1BQ6NUM6 668 aa10.81□□□□□ -0.68
LINC00271-206ENST00000579944 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
LINC00271-206ENST00000579944 PHF14O94880 888 aa10.8□□□□□ -0.68
LINC00271-206ENST00000579944 KCNC4Q03721 635 aa10.8□□□□□ -0.68
LINC00271-206ENST00000579944 KIAA1468Q9P260 1216 aa10.8□□□□□ -0.68
LINC00271-206ENST00000579944 WBP1LQ9NX94 342 aa10.79□□□□□ -0.68
LINC00271-206ENST00000579944 GTPBP6O43824 516 aaPredicted RBP10.77□□□□□ -0.69
LINC00271-206ENST00000579944 ONECUT3O60422 494 aaPredicted RBP10.76□□□□□ -0.69
LINC00271-206ENST00000579944 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
LINC00271-206ENST00000579944 C6orf132Q5T0Z8 1188 aa10.73□□□□□ -0.69
LINC00271-206ENST00000579944 EPAS1Q99814 870 aa10.72□□□□□ -0.69
LINC00271-206ENST00000579944 TSR3Q9UJK0 312 aaKnown RBP10.72□□□□□ -0.69
LINC00271-206ENST00000579944 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
LINC00271-206ENST00000579944 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
LINC00271-206ENST00000579944 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
LINC00271-206ENST00000579944 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.71□□□□□ -0.69
LINC00271-206ENST00000579944 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.69
LINC00271-206ENST00000579944 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
LINC00271-206ENST00000579944 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
LINC00271-206ENST00000579944 GFRA3O60609 400 aa10.65□□□□□ -0.7
LINC00271-206ENST00000579944 DPYSL4O14531 572 aa10.64□□□□□ -0.71
LINC00271-206ENST00000579944 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
LINC00271-206ENST00000579944 TRAF7Q6Q0C0 670 aa10.63□□□□□ -0.71
LINC00271-206ENST00000579944 LCE2BO14633 110 aa10.62□□□□□ -0.71
LINC00271-206ENST00000579944 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
LINC00271-206ENST00000579944 PPP4CP60510 307 aa10.6□□□□□ -0.71
LINC00271-206ENST00000579944 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
LINC00271-206ENST00000579944 DDX12PQ92771 950 aa10.6□□□□□ -0.71
LINC00271-206ENST00000579944 TSKSQ9UJT2 592 aa10.59□□□□□ -0.71
LINC00271-206ENST00000579944 PRKD2Q9BZL6 878 aa10.58□□□□□ -0.72
LINC00271-206ENST00000579944 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
LINC00271-206ENST00000579944 TJAP1Q5JTD0 557 aa10.57□□□□□ -0.72
LINC00271-206ENST00000579944 MAP3K7O43318 606 aa10.56□□□□□ -0.72
LINC00271-206ENST00000579944 NBR1Q14596 966 aa10.56□□□□□ -0.72
LINC00271-206ENST00000579944 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
LINC00271-206ENST00000579944 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
LINC00271-206ENST00000579944 TSR1Q2NL82 804 aaKnown RBP10.55□□□□□ -0.72
LINC00271-206ENST00000579944 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
LINC00271-206ENST00000579944 MTRQ99707 1265 aa10.53□□□□□ -0.72
LINC00271-206ENST00000579944 IL21Q9HBE4 155 aa10.53□□□□□ -0.72
LINC00271-206ENST00000579944 SMAPO00193 183 aa10.52□□□□□ -0.73
LINC00271-206ENST00000579944 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
LINC00271-206ENST00000579944 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
LINC00271-206ENST00000579944 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
LINC00271-206ENST00000579944 PRSS12P56730 875 aa10.48□□□□□ -0.73
LINC00271-206ENST00000579944 PDIA6Q15084 440 aa10.48□□□□□ -0.73
LINC00271-206ENST00000579944 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
LINC00271-206ENST00000579944 NBPF26B4DH59 902 aa10.46□□□□□ -0.73
LINC00271-206ENST00000579944 RNF40O75150 1001 aa10.46□□□□□ -0.73
LINC00271-206ENST00000579944 FAM198AQ9UFP1 575 aa10.46□□□□□ -0.73
LINC00271-206ENST00000579944 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
LINC00271-206ENST00000579944 ZNF516Q92618 1163 aa10.45□□□□□ -0.74
LINC00271-206ENST00000579944 TATDN2Q93075 761 aa10.45□□□□□ -0.74
LINC00271-206ENST00000579944 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
LINC00271-206ENST00000579944 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
LINC00271-206ENST00000579944 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
LINC00271-206ENST00000579944 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
LINC00271-206ENST00000579944 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
LINC00271-206ENST00000579944 HDGFP51858 240 aaKnown RBP10.42□□□□□ -0.74
LINC00271-206ENST00000579944 APLP1P51693 650 aa10.41□□□□□ -0.74
LINC00271-206ENST00000579944 GGCXP38435 758 aa10.39□□□□□ -0.75
LINC00271-206ENST00000579944 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
LINC00271-206ENST00000579944 NKX2-3Q8TAU0 364 aa10.39□□□□□ -0.75
LINC00271-206ENST00000579944 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
LINC00271-206ENST00000579944 GRXCR2A6NFK2 248 aa10.37□□□□□ -0.75
LINC00271-206ENST00000579944 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
LINC00271-206ENST00000579944 COPS2P61201 443 aa10.35□□□□□ -0.75
LINC00271-206ENST00000579944 CDHR5Q9HBB8 845 aa10.35□□□□□ -0.75
LINC00271-206ENST00000579944 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
LINC00271-206ENST00000579944 ZNF775Q96BV0 537 aaPredicted RBP10.34□□□□□ -0.75
LINC00271-206ENST00000579944 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
LINC00271-206ENST00000579944 SLF2Q8IX21 1173 aa10.32□□□□□ -0.76
LINC00271-206ENST00000579944 SWT1Q5T5J6 900 aaKnown RBP10.31□□□□□ -0.76
LINC00271-206ENST00000579944 E2F4Q16254 413 aa10.3□□□□□ -0.76
LINC00271-206ENST00000579944 ZPR1O75312 459 aa10.29□□□□□ -0.76
LINC00271-206ENST00000579944 OSBPP22059 807 aa10.29□□□□□ -0.76
LINC00271-206ENST00000579944 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
LINC00271-206ENST00000579944 PADI6Q6TGC4 694 aa10.27□□□□□ -0.77
LINC00271-206ENST00000579944 ARIH1Q9Y4X5 557 aaPredicted RBP10.27□□□□□ -0.77
LINC00271-206ENST00000579944 TRIM67Q6ZTA4 783 aa10.26□□□□□ -0.77
LINC00271-206ENST00000579944 SLC19A1P41440 591 aa10.25□□□□□ -0.77
LINC00271-206ENST00000579944 PKDCCQ504Y2 493 aa10.25□□□□□ -0.77
LINC00271-206ENST00000579944 TTC13Q8NBP0 860 aa10.25□□□□□ -0.77
LINC00271-206ENST00000579944 PRR14Q9BWN1 585 aa10.25□□□□□ -0.77
LINC00271-206ENST00000579944 BBXQ8WY36 941 aaPredicted RBP10.24□□□□□ -0.77
LINC00271-206ENST00000579944 PCDHB3Q9Y5E6 796 aa10.24□□□□□ -0.77
LINC00271-206ENST00000579944 RNF223E7ERA6 249 aa10.23□□□□□ -0.77
LINC00271-206ENST00000579944 MYT1Q01538 1121 aa10.22□□□□□ -0.77
LINC00271-206ENST00000579944 DGAT1O75907 488 aa10.21□□□□□ -0.77
LINC00271-206ENST00000579944 BLOC1S3Q6QNY0 202 aa10.21□□□□□ -0.77
LINC00271-206ENST00000579944 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
LINC00271-206ENST00000579944 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
LINC00271-206ENST00000579944 WDR70Q9NW82 654 aa10.21□□□□□ -0.77
LINC00271-206ENST00000579944 SPRYD7Q5W111 196 aa10.2□□□□□ -0.78
LINC00271-206ENST00000579944 PRR20EP86478 221 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms