RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 PTPREP23469 700 aa10.33□□□□□ -0.76
TRAPPC8-205ENST00000578658 PSEN2P49810 448 aa10.33□□□□□ -0.76
TRAPPC8-205ENST00000578658 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAPPC8-205ENST00000578658 RBM33Q96EV2 1170 aaKnown RBP10.32□□□□□ -0.76
TRAPPC8-205ENST00000578658 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
TRAPPC8-205ENST00000578658 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
TRAPPC8-205ENST00000578658 MAP3K7O43318 606 aa10.3□□□□□ -0.76
TRAPPC8-205ENST00000578658 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
TRAPPC8-205ENST00000578658 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
TRAPPC8-205ENST00000578658 PPP1R3GB7ZBB8 358 aa10.27□□□□□ -0.77
TRAPPC8-205ENST00000578658 COL9A1P20849 921 aa10.27□□□□□ -0.77
TRAPPC8-205ENST00000578658 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
TRAPPC8-205ENST00000578658 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
TRAPPC8-205ENST00000578658 TK2O00142 265 aa10.25□□□□□ -0.77
TRAPPC8-205ENST00000578658 ZBED2Q9BTP6 218 aa10.25□□□□□ -0.77
TRAPPC8-205ENST00000578658 SLC4A5Q9BY07 1137 aa10.25□□□□□ -0.77
TRAPPC8-205ENST00000578658 ADGRD1Q6QNK2 874 aa10.24□□□□□ -0.77
TRAPPC8-205ENST00000578658 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
TRAPPC8-205ENST00000578658 VPS9D1Q9Y2B5 631 aa10.22□□□□□ -0.77
TRAPPC8-205ENST00000578658 SPNS2Q8IVW8 549 aa10.21□□□□□ -0.77
TRAPPC8-205ENST00000578658 RBM26Q5T8P6 1007 aaKnown RBP10.2□□□□□ -0.78
TRAPPC8-205ENST00000578658 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
TRAPPC8-205ENST00000578658 NPDC1Q9NQX5 325 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC8-205ENST00000578658 HRO43593 1189 aa10.19□□□□□ -0.78
TRAPPC8-205ENST00000578658 PROX2Q3B8N5 592 aa10.19□□□□□ -0.78
TRAPPC8-205ENST00000578658 NUTM2FA1L443 756 aa10.17□□□□□ -0.78
TRAPPC8-205ENST00000578658 PTGDRQ13258 359 aa10.17□□□□□ -0.78
TRAPPC8-205ENST00000578658 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC8-205ENST00000578658 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC8-205ENST00000578658 PRSS12P56730 875 aa10.16□□□□□ -0.78
TRAPPC8-205ENST00000578658 TRIM6-TRIM34B2RNG4 842 aa10.15□□□□□ -0.78
TRAPPC8-205ENST00000578658 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC8-205ENST00000578658 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.78
TRAPPC8-205ENST00000578658 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
TRAPPC8-205ENST00000578658 RABGEF1Q9UJ41 708 aa10.14□□□□□ -0.79
TRAPPC8-205ENST00000578658 FCHSD2O94868 740 aa10.13□□□□□ -0.79
TRAPPC8-205ENST00000578658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRAPPC8-205ENST00000578658 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
TRAPPC8-205ENST00000578658 GPR37O15354 613 aa10.12□□□□□ -0.79
TRAPPC8-205ENST00000578658 TTC13Q8NBP0 860 aa10.12□□□□□ -0.79
TRAPPC8-205ENST00000578658 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
TRAPPC8-205ENST00000578658 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
TRAPPC8-205ENST00000578658 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
TRAPPC8-205ENST00000578658 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
TRAPPC8-205ENST00000578658 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
TRAPPC8-205ENST00000578658 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
TRAPPC8-205ENST00000578658 BCANQ96GW7 911 aa10.1□□□□□ -0.79
TRAPPC8-205ENST00000578658 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
TRAPPC8-205ENST00000578658 LMOD2Q6P5Q4 547 aa10.09□□□□□ -0.79
TRAPPC8-205ENST00000578658 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
TRAPPC8-205ENST00000578658 HIC1Q14526 733 aa10.08□□□□□ -0.8
TRAPPC8-205ENST00000578658 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
TRAPPC8-205ENST00000578658 STAC3Q96MF2 364 aa10.08□□□□□ -0.8
TRAPPC8-205ENST00000578658 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
TRAPPC8-205ENST00000578658 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
TRAPPC8-205ENST00000578658 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
TRAPPC8-205ENST00000578658 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
TRAPPC8-205ENST00000578658 GNPATO15228 680 aa10.05□□□□□ -0.8
TRAPPC8-205ENST00000578658 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC8-205ENST00000578658 SEPT9Q9UHD8 586 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC8-205ENST00000578658 TATDN2Q93075 761 aa10.04□□□□□ -0.8
TRAPPC8-205ENST00000578658 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
TRAPPC8-205ENST00000578658 PNMA3Q9UL41 463 aa10.03□□□□□ -0.8
TRAPPC8-205ENST00000578658 SMAPO00193 183 aa10.02□□□□□ -0.81
TRAPPC8-205ENST00000578658 FECHP22830 423 aa10.02□□□□□ -0.81
TRAPPC8-205ENST00000578658 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
TRAPPC8-205ENST00000578658 ADGRG1Q9Y653 693 aa10.01□□□□□ -0.81
TRAPPC8-205ENST00000578658 GOLGA8CPA6NN73 597 aa10□□□□□ -0.81
TRAPPC8-205ENST00000578658 ZFRQ96KR1 1074 aaKnown RBP10□□□□□ -0.81
TRAPPC8-205ENST00000578658 EYA1Q99502 592 aa10□□□□□ -0.81
TRAPPC8-205ENST00000578658 KCTD12Q96CX2 325 aaKnown RBP9.99□□□□□ -0.81
TRAPPC8-205ENST00000578658 FAM161AQ3B820 660 aa9.98□□□□□ -0.81
TRAPPC8-205ENST00000578658 WNT2BQ93097 391 aa9.98□□□□□ -0.81
TRAPPC8-205ENST00000578658 ANKK1Q8NFD2 765 aa9.97□□□□□ -0.81
TRAPPC8-205ENST00000578658 ZC3H15Q8WU90 426 aaKnown RBP9.97□□□□□ -0.81
TRAPPC8-205ENST00000578658 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
TRAPPC8-205ENST00000578658 THSD4Q6ZMP0 1018 aa9.95□□□□□ -0.82
TRAPPC8-205ENST00000578658 ZMYND10O75800 440 aa9.94□□□□□ -0.82
TRAPPC8-205ENST00000578658 OATP04181 439 aa9.94□□□□□ -0.82
TRAPPC8-205ENST00000578658 MAP2K5Q13163 448 aa9.94□□□□□ -0.82
TRAPPC8-205ENST00000578658 SOWAHBA6NEL2 793 aa9.93□□□□□ -0.82
TRAPPC8-205ENST00000578658 METTL3Q86U44 580 aaKnown RBP9.93□□□□□ -0.82
TRAPPC8-205ENST00000578658 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
TRAPPC8-205ENST00000578658 BCAMP50895 628 aa9.92□□□□□ -0.82
TRAPPC8-205ENST00000578658 SAMD7Q7Z3H4 446 aa9.92□□□□□ -0.82
TRAPPC8-205ENST00000578658 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
TRAPPC8-205ENST00000578658 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC8-205ENST00000578658 IRF6O14896 467 aa9.91□□□□□ -0.82
TRAPPC8-205ENST00000578658 DNAJB2P25686 324 aa9.91□□□□□ -0.82
TRAPPC8-205ENST00000578658 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
TRAPPC8-205ENST00000578658 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC8-205ENST00000578658 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
TRAPPC8-205ENST00000578658 RCCD1A6NED2 376 aa9.9□□□□□ -0.82
TRAPPC8-205ENST00000578658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.89□□□□□ -0.83
TRAPPC8-205ENST00000578658 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
TRAPPC8-205ENST00000578658 TMEM134Q9H6X4 195 aa9.89□□□□□ -0.83
TRAPPC8-205ENST00000578658 PTPN5P54829 565 aa9.88□□□□□ -0.83
TRAPPC8-205ENST00000578658 PHOX2BQ99453 314 aa9.88□□□□□ -0.83
TRAPPC8-205ENST00000578658 HDGFP51858 240 aaKnown RBP9.87□□□□□ -0.83
TRAPPC8-205ENST00000578658 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms