RNA–Protein interactions for RNA: ENST00000578648.5

MSL1-204, Transcript of male specific lethal 1 homolog, humanhuman

TSL 5 BASIC

Gene MSL1, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-204ENST00000578648 TMC1Q8TDI8 760 aa28.68■■■□□ 2.18
MSL1-204ENST00000578648 SAMD9LQ8IVG5 1584 aa28.64■■■□□ 2.17
MSL1-204ENST00000578648 CDC42BPBQ9Y5S2 1711 aa28.62■■■□□ 2.17
MSL1-204ENST00000578648 FAM135AQ9P2D6 1515 aa28.62■■■□□ 2.17
MSL1-204ENST00000578648 CCDC141Q6ZP82 1450 aa28.61■■■□□ 2.17
MSL1-204ENST00000578648 LRPPRCP42704 1394 aaKnown RBP28.61■■■□□ 2.17
MSL1-204ENST00000578648 E9PCH4 1651 aa28.6■■■□□ 2.17
MSL1-204ENST00000578648 MYBBP1AQ9BQG0 1328 aaKnown RBP28.59■■■□□ 2.17
MSL1-204ENST00000578648 BRD4O60885 1362 aaPredicted RBP28.58■■■□□ 2.17
MSL1-204ENST00000578648 RALBP1Q15311 655 aa28.57■■■□□ 2.16
MSL1-204ENST00000578648 PREX2Q70Z35 1606 aa28.57■■■□□ 2.16
MSL1-204ENST00000578648 PRAG1Q86YV5 1406 aa28.54■■■□□ 2.16
MSL1-204ENST00000578648 KTN1Q86UP2 1357 aaKnown RBP28.54■■■□□ 2.16
MSL1-204ENST00000578648 TRPM1Q7Z4N2 1603 aa28.53■■■□□ 2.16
MSL1-204ENST00000578648 RSPH4AQ5TD94 716 aa28.53■■■□□ 2.16
MSL1-204ENST00000578648 ERICH6Q7L0X2 663 aa28.52■■■□□ 2.16
MSL1-204ENST00000578648 NBPF1Q3BBV0 1214 aa28.51■■■□□ 2.15
MSL1-204ENST00000578648 PLA2R1Q13018 1463 aa28.5■■■□□ 2.15
MSL1-204ENST00000578648 CCDC136Q96JN2 1154 aa28.5■■■□□ 2.15
MSL1-204ENST00000578648 CCDC144AA2RUR9 1427 aa28.5■■■□□ 2.15
MSL1-204ENST00000578648 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
MSL1-204ENST00000578648 RGL3Q3MIN7 710 aa28.49■■■□□ 2.15
MSL1-204ENST00000578648 SYCP2Q9BX26 1530 aa28.48■■■□□ 2.15
MSL1-204ENST00000578648 ABCC2Q92887 1545 aa28.46■■■□□ 2.15
MSL1-204ENST00000578648 UNC13BO14795 1591 aa28.45■■■□□ 2.15
MSL1-204ENST00000578648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.45■■■□□ 2.142e-7■■■□□ 14.6
MSL1-204ENST00000578648 PARD3Q8TEW0 1356 aa28.45■■■□□ 2.14
MSL1-204ENST00000578648 PER1O15534 1290 aaPredicted RBP28.44■■■□□ 2.14
MSL1-204ENST00000578648 A2MP01023 1474 aa28.44■■■□□ 2.14
MSL1-204ENST00000578648 TTC37Q6PGP7 1564 aa28.44■■■□□ 2.14
MSL1-204ENST00000578648 MAST1Q9Y2H9 1570 aa28.44■■■□□ 2.14
MSL1-204ENST00000578648 GPRASP1Q5JY77 1395 aa28.43■■■□□ 2.14
MSL1-204ENST00000578648 CLASP1Q7Z460 1538 aa28.42■■■□□ 2.14
MSL1-204ENST00000578648 NLRP13Q86W25 1043 aa28.41■■■□□ 2.14
MSL1-204ENST00000578648 ARHGAP5Q13017 1502 aa28.41■■■□□ 2.14
MSL1-204ENST00000578648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.4■■■□□ 2.142e-7■■■□□ 18.6
MSL1-204ENST00000578648 PLEKHH2Q8IVE3 1493 aa28.38■■■□□ 2.13
MSL1-204ENST00000578648 TESK2Q96S53 571 aa28.38■■■□□ 2.13
MSL1-204ENST00000578648 SALL2Q9Y467 1007 aaPredicted RBP28.37■■■□□ 2.13
MSL1-204ENST00000578648 COL17A1Q9UMD9 1497 aaPredicted RBP28.36■■■□□ 2.13
MSL1-204ENST00000578648 DISP3Q9P2K9 1392 aa28.36■■■□□ 2.13
MSL1-204ENST00000578648 RRP1P56182 461 aaKnown RBP28.36■■■□□ 2.13
MSL1-204ENST00000578648 IQGAP3Q86VI3 1631 aa28.35■■■□□ 2.13
MSL1-204ENST00000578648 PRDM15P57071 1507 aaPredicted RBP28.35■■■□□ 2.13
MSL1-204ENST00000578648 LAMC1P11047 1609 aa28.34■■■□□ 2.13
MSL1-204ENST00000578648 MYO5CQ9NQX4 1742 aa28.34■■■□□ 2.13
MSL1-204ENST00000578648 PLXNC1O60486 1568 aa28.33■■■□□ 2.13
MSL1-204ENST00000578648 RCAN3Q9UKA8 241 aa28.31■■■□□ 2.12
MSL1-204ENST00000578648 BCL11AQ9H165 835 aa28.31■■■□□ 2.12
MSL1-204ENST00000578648 EXOC6Q8TAG9 804 aa28.3■■■□□ 2.12
MSL1-204ENST00000578648 CC2D1BQ5T0F9 858 aaKnown RBP28.3■■■□□ 2.12
MSL1-204ENST00000578648 UHRF1BP1LA0JNW5 1464 aa28.29■■■□□ 2.12
MSL1-204ENST00000578648 ERBINQ96RT1 1412 aa28.29■■■□□ 2.12
MSL1-204ENST00000578648 PANK3Q9H999 370 aa28.29■■■□□ 2.12
MSL1-204ENST00000578648 NOP58Q9Y2X3 529 aaKnown RBP28.29■■■□□ 2.12
MSL1-204ENST00000578648 ZCCHC11Q5TAX3 1644 aaKnown RBP28.27■■■□□ 2.12
MSL1-204ENST00000578648 PDE3BQ13370 1112 aa28.27■■■□□ 2.12
MSL1-204ENST00000578648 WASHC2CQ9Y4E1 1318 aa28.27■■■□□ 2.12
MSL1-204ENST00000578648 PAK3O75914 559 aaPredicted RBP28.27■■■□□ 2.12
MSL1-204ENST00000578648 ATP10AO60312 1499 aa28.27■■■□□ 2.12
MSL1-204ENST00000578648 DUOX2Q9NRD8 1548 aa28.26■■■□□ 2.12
MSL1-204ENST00000578648 CDCA7LQ96GN5 454 aa28.26■■■□□ 2.11
MSL1-204ENST00000578648 MAGI2Q86UL8 1455 aa28.25■■■□□ 2.11
MSL1-204ENST00000578648 EIF2AK4Q9P2K8 1649 aaKnown RBP28.24■■■□□ 2.11
MSL1-204ENST00000578648 TMF1P82094 1093 aa28.21■■■□□ 2.11
MSL1-204ENST00000578648 BLMP54132 1417 aaPredicted RBP28.2■■■□□ 2.1
MSL1-204ENST00000578648 INSRP06213 1382 aa28.17■■■□□ 2.1
MSL1-204ENST00000578648 PLCH2O75038 1416 aa28.17■■■□□ 2.1
MSL1-204ENST00000578648 IPO9Q96P70 1041 aaKnown RBP28.16■■■□□ 2.1
MSL1-204ENST00000578648 RNF17Q9BXT8 1623 aaKnown RBP28.16■■■□□ 2.1
MSL1-204ENST00000578648 ANP32AP39687 249 aaKnown RBP28.15■■■□□ 2.1
MSL1-204ENST00000578648 ZMYM4Q5VZL5 1548 aa28.13■■■□□ 2.09
MSL1-204ENST00000578648 TRAPPC8Q9Y2L5 1435 aa28.12■■■□□ 2.09
MSL1-204ENST00000578648 EFCAB2Q5VUJ9 269 aa28.12■■■□□ 2.09
MSL1-204ENST00000578648 PLIN1O60240 522 aa28.11■■■□□ 2.09
MSL1-204ENST00000578648 MYT1LQ9UL68 1186 aa28.09■■■□□ 2.09
MSL1-204ENST00000578648 WDR7Q9Y4E6 1490 aa28.09■■■□□ 2.09
MSL1-204ENST00000578648 ABCC1P33527 1531 aa28.08■■■□□ 2.09
MSL1-204ENST00000578648 TCERG1O14776 1098 aaKnown RBP28.08■■■□□ 2.09
MSL1-204ENST00000578648 MADDQ8WXG6 1647 aa28.07■■■□□ 2.08
MSL1-204ENST00000578648 ADAMTS8Q9UP79 889 aa28.07■■■□□ 2.08
MSL1-204ENST00000578648 NBR1Q14596 966 aa28.05■■■□□ 2.08
MSL1-204ENST00000578648 IQGAP1P46940 1657 aa28.04■■■□□ 2.08
MSL1-204ENST00000578648 ZBTB47Q9UFB7 747 aaPredicted RBP28.03■■■□□ 2.08
MSL1-204ENST00000578648 PPP2R1AP30153 589 aa28.02■■■□□ 2.08
MSL1-204ENST00000578648 CRBNQ96SW2 442 aa28.02■■■□□ 2.08
MSL1-204ENST00000578648 PDE4AP27815 886 aa28.01■■■□□ 2.07
MSL1-204ENST00000578648 ARAP3Q8WWN8 1544 aa28.01■■■□□ 2.07
MSL1-204ENST00000578648 DEKP35659 375 aaKnown RBP28.01■■■□□ 2.07
MSL1-204ENST00000578648 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
MSL1-204ENST00000578648 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
MSL1-204ENST00000578648 SPAG9O60271 1321 aaKnown RBP27.99■■■□□ 2.07
MSL1-204ENST00000578648 AFAP1Q8N556 730 aa27.99■■■□□ 2.07
MSL1-204ENST00000578648 TRPM2O94759 1503 aa27.99■■■□□ 2.07
MSL1-204ENST00000578648 SPHKAPQ2M3C7 1700 aa27.98■■■□□ 2.07
MSL1-204ENST00000578648 BACH2Q9BYV9 841 aa27.97■■■□□ 2.07
MSL1-204ENST00000578648 PTPRTO14522 1441 aa27.97■■■□□ 2.07
MSL1-204ENST00000578648 CEP152O94986 1710 aa27.96■■■□□ 2.07
MSL1-204ENST00000578648 MS4A1P11836 297 aa27.96■■■□□ 2.07
MSL1-204ENST00000578648 CLTCL1P53675 1640 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms