RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 GPR153Q6NV75 609 aa10.55□□□□□ -0.72
PTPRM-208ENST00000578600 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRM-208ENST00000578600 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
PTPRM-208ENST00000578600 KDM4CQ9H3R0 1056 aa10.55□□□□□ -0.72
PTPRM-208ENST00000578600 ZSWIM6Q9HCJ5 1215 aa10.55□□□□□ -0.72
PTPRM-208ENST00000578600 MAP3K7O43318 606 aa10.54□□□□□ -0.72
PTPRM-208ENST00000578600 AMHR2Q16671 573 aa10.54□□□□□ -0.72
PTPRM-208ENST00000578600 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
PTPRM-208ENST00000578600 RBM33Q96EV2 1170 aaKnown RBP10.54□□□□□ -0.72
PTPRM-208ENST00000578600 SCUBE2Q9NQ36 999 aa10.54□□□□□ -0.72
PTPRM-208ENST00000578600 NUDT7P0C024 238 aa10.53□□□□□ -0.72
PTPRM-208ENST00000578600 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
PTPRM-208ENST00000578600 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
PTPRM-208ENST00000578600 RIMBP2O15034 1052 aa10.5□□□□□ -0.73
PTPRM-208ENST00000578600 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
PTPRM-208ENST00000578600 ZNF454Q8N9F8 522 aa10.49□□□□□ -0.73
PTPRM-208ENST00000578600 ZDHHC16Q969W1 377 aa10.49□□□□□ -0.73
PTPRM-208ENST00000578600 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
PTPRM-208ENST00000578600 PARP9Q8IXQ6 854 aa10.48□□□□□ -0.73
PTPRM-208ENST00000578600 IL27Q8NEV9 243 aa10.47□□□□□ -0.73
PTPRM-208ENST00000578600 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
PTPRM-208ENST00000578600 ADAM33Q9BZ11 813 aa10.46□□□□□ -0.73
PTPRM-208ENST00000578600 ZNF710Q8N1W2 664 aa10.45□□□□□ -0.74
PTPRM-208ENST00000578600 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
PTPRM-208ENST00000578600 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
PTPRM-208ENST00000578600 CECR2Q9BXF3 1484 aa10.44□□□□□ -0.74
PTPRM-208ENST00000578600 FAM117AQ9C073 453 aa10.44□□□□□ -0.74
PTPRM-208ENST00000578600 TTC13Q8NBP0 860 aa10.43□□□□□ -0.74
PTPRM-208ENST00000578600 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
PTPRM-208ENST00000578600 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
PTPRM-208ENST00000578600 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
PTPRM-208ENST00000578600 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
PTPRM-208ENST00000578600 SNPHO15079 494 aa10.41□□□□□ -0.74
PTPRM-208ENST00000578600 PADI6Q6TGC4 694 aa10.41□□□□□ -0.74
PTPRM-208ENST00000578600 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
PTPRM-208ENST00000578600 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
PTPRM-208ENST00000578600 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
PTPRM-208ENST00000578600 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-208ENST00000578600 TTLL12Q14166 644 aaPredicted RBP10.39□□□□□ -0.75
PTPRM-208ENST00000578600 GIGYF2Q6Y7W6 1299 aaKnown RBP10.39□□□□□ -0.75
PTPRM-208ENST00000578600 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
PTPRM-208ENST00000578600 PPP4R3BQ5MIZ7 849 aa10.38□□□□□ -0.75
PTPRM-208ENST00000578600 DDRGK1Q96HY6 314 aa10.38□□□□□ -0.75
PTPRM-208ENST00000578600 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
PTPRM-208ENST00000578600 PRSS12P56730 875 aa10.37□□□□□ -0.75
PTPRM-208ENST00000578600 FAM161AQ3B820 660 aa10.37□□□□□ -0.75
PTPRM-208ENST00000578600 METTL3Q86U44 580 aaKnown RBP10.37□□□□□ -0.75
PTPRM-208ENST00000578600 BICRAQ9NZM4 1560 aa10.37□□□□□ -0.75
PTPRM-208ENST00000578600 OATP04181 439 aa10.36□□□□□ -0.75
PTPRM-208ENST00000578600 MS4A1P11836 297 aa10.36□□□□□ -0.75
PTPRM-208ENST00000578600 COL9A1P20849 921 aa10.36□□□□□ -0.75
PTPRM-208ENST00000578600 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
PTPRM-208ENST00000578600 CLCN1P35523 988 aa10.35□□□□□ -0.75
PTPRM-208ENST00000578600 CDCA7LQ96GN5 454 aa10.35□□□□□ -0.75
PTPRM-208ENST00000578600 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
PTPRM-208ENST00000578600 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
PTPRM-208ENST00000578600 FAM198AQ9UFP1 575 aa10.34□□□□□ -0.75
PTPRM-208ENST00000578600 PPP1R3GB7ZBB8 358 aa10.31□□□□□ -0.76
PTPRM-208ENST00000578600 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
PTPRM-208ENST00000578600 PTPREP23469 700 aa10.3□□□□□ -0.76
PTPRM-208ENST00000578600 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
PTPRM-208ENST00000578600 GOPCQ9HD26 462 aa10.3□□□□□ -0.76
PTPRM-208ENST00000578600 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-208ENST00000578600 FAM217BQ9NTX9 383 aaPredicted RBP10.29□□□□□ -0.76
PTPRM-208ENST00000578600 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
PTPRM-208ENST00000578600 LHX8Q68G74 356 aa10.28□□□□□ -0.76
PTPRM-208ENST00000578600 RBM46Q8TBY0 533 aaKnown RBP10.28□□□□□ -0.76
PTPRM-208ENST00000578600 EYA1Q99502 592 aa10.28□□□□□ -0.76
PTPRM-208ENST00000578600 UNC13AQ9UPW8 1703 aa10.27□□□□□ -0.76
PTPRM-208ENST00000578600 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
PTPRM-208ENST00000578600 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
PTPRM-208ENST00000578600 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
PTPRM-208ENST00000578600 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
PTPRM-208ENST00000578600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
PTPRM-208ENST00000578600 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
PTPRM-208ENST00000578600 ARXQ96QS3 562 aa10.23□□□□□ -0.77
PTPRM-208ENST00000578600 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
PTPRM-208ENST00000578600 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
PTPRM-208ENST00000578600 NUDT18Q6ZVK8 323 aa10.22□□□□□ -0.77
PTPRM-208ENST00000578600 TATDN2Q93075 761 aa10.22□□□□□ -0.77
PTPRM-208ENST00000578600 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
PTPRM-208ENST00000578600 BEGAINQ9BUH8 593 aa10.22□□□□□ -0.77
PTPRM-208ENST00000578600 PROX2Q3B8N5 592 aa10.21□□□□□ -0.77
PTPRM-208ENST00000578600 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
PTPRM-208ENST00000578600 PACS2Q86VP3 889 aa10.2□□□□□ -0.78
PTPRM-208ENST00000578600 ZBED2Q9BTP6 218 aa10.2□□□□□ -0.78
PTPRM-208ENST00000578600 ST18O60284 1047 aa10.19□□□□□ -0.78
PTPRM-208ENST00000578600 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
PTPRM-208ENST00000578600 PNMA3Q9UL41 463 aa10.19□□□□□ -0.78
PTPRM-208ENST00000578600 DNAJB2P25686 324 aa10.18□□□□□ -0.78
PTPRM-208ENST00000578600 PSEN2P49810 448 aa10.18□□□□□ -0.78
PTPRM-208ENST00000578600 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
PTPRM-208ENST00000578600 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
PTPRM-208ENST00000578600 RSPH6AQ9H0K4 717 aa10.18□□□□□ -0.78
PTPRM-208ENST00000578600 ERBB3P21860 1342 aa10.17□□□□□ -0.78
PTPRM-208ENST00000578600 VARS2Q5ST30 1063 aaKnown RBP10.17□□□□□ -0.78
PTPRM-208ENST00000578600 CUX2O14529 1486 aa10.17□□□□□ -0.78
PTPRM-208ENST00000578600 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
PTPRM-208ENST00000578600 TMEM134Q9H6X4 195 aa10.16□□□□□ -0.78
PTPRM-208ENST00000578600 SMAPO00193 183 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms