RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 GPR37O15354 613 aa10.72□□□□□ -0.69
PTPRM-207ENST00000578571 C6orf132Q5T0Z8 1188 aa10.72□□□□□ -0.69
PTPRM-207ENST00000578571 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
PTPRM-207ENST00000578571 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
PTPRM-207ENST00000578571 NUTM2FA1L443 756 aa10.71□□□□□ -0.69
PTPRM-207ENST00000578571 ZNF687Q8N1G0 1237 aa10.71□□□□□ -0.69
PTPRM-207ENST00000578571 NPDC1Q9NQX5 325 aaPredicted RBP10.7□□□□□ -0.7
PTPRM-207ENST00000578571 PTGDRQ13258 359 aa10.68□□□□□ -0.7
PTPRM-207ENST00000578571 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
PTPRM-207ENST00000578571 COL9A1P20849 921 aa10.67□□□□□ -0.7
PTPRM-207ENST00000578571 PTPREP23469 700 aa10.67□□□□□ -0.7
PTPRM-207ENST00000578571 KCNK17Q96T54 332 aa10.67□□□□□ -0.7
PTPRM-207ENST00000578571 POTEGQ6S5H5 508 aa10.66□□□□□ -0.7
PTPRM-207ENST00000578571 POTEMA6NI47 508 aa10.65□□□□□ -0.7
PTPRM-207ENST00000578571 FCHSD2O94868 740 aa10.65□□□□□ -0.7
PTPRM-207ENST00000578571 PSEN2P49810 448 aa10.65□□□□□ -0.7
PTPRM-207ENST00000578571 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.7
PTPRM-207ENST00000578571 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
PTPRM-207ENST00000578571 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
PTPRM-207ENST00000578571 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
PTPRM-207ENST00000578571 PBX2P40425 430 aa10.64□□□□□ -0.71
PTPRM-207ENST00000578571 ZMYND10O75800 440 aa10.62□□□□□ -0.71
PTPRM-207ENST00000578571 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
PTPRM-207ENST00000578571 CERKQ8TCT0 537 aa10.62□□□□□ -0.71
PTPRM-207ENST00000578571 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
PTPRM-207ENST00000578571 HIC1Q14526 733 aa10.61□□□□□ -0.71
PTPRM-207ENST00000578571 GNPATO15228 680 aa10.6□□□□□ -0.71
PTPRM-207ENST00000578571 FECHP22830 423 aa10.6□□□□□ -0.71
PTPRM-207ENST00000578571 BARGINQ6ZT62 677 aa10.59□□□□□ -0.71
PTPRM-207ENST00000578571 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
PTPRM-207ENST00000578571 ZBED2Q9BTP6 218 aa10.59□□□□□ -0.71
PTPRM-207ENST00000578571 PRSS12P56730 875 aa10.58□□□□□ -0.72
PTPRM-207ENST00000578571 TTC13Q8NBP0 860 aa10.58□□□□□ -0.72
PTPRM-207ENST00000578571 PROX2Q3B8N5 592 aa10.57□□□□□ -0.72
PTPRM-207ENST00000578571 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
PTPRM-207ENST00000578571 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
PTPRM-207ENST00000578571 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
PTPRM-207ENST00000578571 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
PTPRM-207ENST00000578571 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
PTPRM-207ENST00000578571 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
PTPRM-207ENST00000578571 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
PTPRM-207ENST00000578571 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
PTPRM-207ENST00000578571 TRIM6-TRIM34B2RNG4 842 aa10.55□□□□□ -0.72
PTPRM-207ENST00000578571 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRM-207ENST00000578571 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
PTPRM-207ENST00000578571 VPS9D1Q9Y2B5 631 aa10.53□□□□□ -0.72
PTPRM-207ENST00000578571 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
PTPRM-207ENST00000578571 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
PTPRM-207ENST00000578571 TK2O00142 265 aa10.51□□□□□ -0.73
PTPRM-207ENST00000578571 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
PTPRM-207ENST00000578571 SLC24A3Q9HC58 644 aa10.5□□□□□ -0.73
PTPRM-207ENST00000578571 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-207ENST00000578571 IRF6O14896 467 aa10.49□□□□□ -0.73
PTPRM-207ENST00000578571 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
PTPRM-207ENST00000578571 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
PTPRM-207ENST00000578571 KIAA1468Q9P260 1216 aa10.49□□□□□ -0.73
PTPRM-207ENST00000578571 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
PTPRM-207ENST00000578571 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
PTPRM-207ENST00000578571 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
PTPRM-207ENST00000578571 CCDC102AQ96A19 550 aa10.48□□□□□ -0.73
PTPRM-207ENST00000578571 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
PTPRM-207ENST00000578571 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
PTPRM-207ENST00000578571 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
PTPRM-207ENST00000578571 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.73
PTPRM-207ENST00000578571 HRO43593 1189 aa10.46□□□□□ -0.73
PTPRM-207ENST00000578571 TATDN2Q93075 761 aa10.46□□□□□ -0.73
PTPRM-207ENST00000578571 NBPF26B4DH59 902 aa10.45□□□□□ -0.74
PTPRM-207ENST00000578571 NUDT18Q6ZVK8 323 aa10.45□□□□□ -0.74
PTPRM-207ENST00000578571 AK7Q96M32 723 aa10.44□□□□□ -0.74
PTPRM-207ENST00000578571 EYA1Q99502 592 aa10.44□□□□□ -0.74
PTPRM-207ENST00000578571 PNMA3Q9UL41 463 aa10.44□□□□□ -0.74
PTPRM-207ENST00000578571 SMAPO00193 183 aa10.43□□□□□ -0.74
PTPRM-207ENST00000578571 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
PTPRM-207ENST00000578571 PXYLP1Q8TE99 480 aa10.43□□□□□ -0.74
PTPRM-207ENST00000578571 PHOX2BQ99453 314 aa10.43□□□□□ -0.74
PTPRM-207ENST00000578571 OATP04181 439 aa10.42□□□□□ -0.74
PTPRM-207ENST00000578571 TRIM66O15016 1216 aa10.41□□□□□ -0.74
PTPRM-207ENST00000578571 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
PTPRM-207ENST00000578571 SEPT9Q9UHD8 586 aaPredicted RBP10.41□□□□□ -0.74
PTPRM-207ENST00000578571 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
PTPRM-207ENST00000578571 RCCD1A6NED2 376 aa10.37□□□□□ -0.75
PTPRM-207ENST00000578571 FAM98CQ17RN3 349 aaKnown RBP10.37□□□□□ -0.75
PTPRM-207ENST00000578571 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
PTPRM-207ENST00000578571 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
PTPRM-207ENST00000578571 AMHR2Q16671 573 aa10.36□□□□□ -0.75
PTPRM-207ENST00000578571 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
PTPRM-207ENST00000578571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
PTPRM-207ENST00000578571 DNAJB2P25686 324 aa10.34□□□□□ -0.75
PTPRM-207ENST00000578571 PDE4DQ08499 809 aa10.33□□□□□ -0.76
PTPRM-207ENST00000578571 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
PTPRM-207ENST00000578571 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
PTPRM-207ENST00000578571 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
PTPRM-207ENST00000578571 MDM2Q00987 491 aaPredicted RBP10.32□□□□□ -0.76
PTPRM-207ENST00000578571 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
PTPRM-207ENST00000578571 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
PTPRM-207ENST00000578571 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
PTPRM-207ENST00000578571 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
PTPRM-207ENST00000578571 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
PTPRM-207ENST00000578571 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
PTPRM-207ENST00000578571 CLCN1P35523 988 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms