RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
SKA2-204ENST00000578519 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
SKA2-204ENST00000578519 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
SKA2-204ENST00000578519 NEO1Q92859 1461 aa15.59■□□□□ 0.09
SKA2-204ENST00000578519 CYB5RLQ6IPT4 315 aa15.59■□□□□ 0.09
SKA2-204ENST00000578519 STAC3Q96MF2 364 aa15.59■□□□□ 0.09
SKA2-204ENST00000578519 ATP7AQ04656 1500 aa15.58■□□□□ 0.09
SKA2-204ENST00000578519 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.09
SKA2-204ENST00000578519 DDX10Q13206 875 aaKnown RBP15.58■□□□□ 0.08
SKA2-204ENST00000578519 MAGI2Q86UL8 1455 aa15.58■□□□□ 0.08
SKA2-204ENST00000578519 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
SKA2-204ENST00000578519 HSPA5P11021 654 aaKnown RBP15.57■□□□□ 0.08
SKA2-204ENST00000578519 ANP32CO43423 234 aa15.56■□□□□ 0.08
SKA2-204ENST00000578519 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
SKA2-204ENST00000578519 ATP10AO60312 1499 aa15.55■□□□□ 0.08
SKA2-204ENST00000578519 UHRF1BP1Q6BDS2 1440 aa15.55■□□□□ 0.08
SKA2-204ENST00000578519 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
SKA2-204ENST00000578519 KIF3BO15066 747 aa15.53■□□□□ 0.08
SKA2-204ENST00000578519 NBPF8Q3BBV2 869 aa15.53■□□□□ 0.08
SKA2-204ENST00000578519 EIF2AK4Q9P2K8 1649 aaKnown RBP15.53■□□□□ 0.08
SKA2-204ENST00000578519 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.08
SKA2-204ENST00000578519 GLI2P10070 1586 aa15.52■□□□□ 0.07
SKA2-204ENST00000578519 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
SKA2-204ENST00000578519 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
SKA2-204ENST00000578519 DCAF11Q8TEB1 546 aa15.51■□□□□ 0.07
SKA2-204ENST00000578519 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
SKA2-204ENST00000578519 ZNF326Q5BKZ1 582 aaKnown RBP15.5■□□□□ 0.07
SKA2-204ENST00000578519 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
SKA2-204ENST00000578519 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
SKA2-204ENST00000578519 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
SKA2-204ENST00000578519 A2MP01023 1474 aa15.49■□□□□ 0.07
SKA2-204ENST00000578519 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
SKA2-204ENST00000578519 HIRIP3Q9BW71 556 aaPredicted RBP15.49■□□□□ 0.07
SKA2-204ENST00000578519 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
SKA2-204ENST00000578519 KDM5CP41229 1560 aa15.47■□□□□ 0.07
SKA2-204ENST00000578519 CARD11Q9BXL7 1154 aa15.47■□□□□ 0.07
SKA2-204ENST00000578519 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.07
SKA2-204ENST00000578519 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
SKA2-204ENST00000578519 FAM69CQ0P6D2 419 aa15.46■□□□□ 0.07
SKA2-204ENST00000578519 DEPDC5O75140 1603 aa15.46■□□□□ 0.06
SKA2-204ENST00000578519 HECW2Q9P2P5 1572 aa15.44■□□□□ 0.06
SKA2-204ENST00000578519 TET3O43151 1660 aa15.44■□□□□ 0.06
SKA2-204ENST00000578519 PTPRTO14522 1441 aa15.43■□□□□ 0.06
SKA2-204ENST00000578519 RGL3Q3MIN7 710 aa15.43■□□□□ 0.06
SKA2-204ENST00000578519 USP47Q96K76 1375 aa15.43■□□□□ 0.06
SKA2-204ENST00000578519 PLA2R1Q13018 1463 aa15.43■□□□□ 0.06
SKA2-204ENST00000578519 VWDEQ8N2E2 1590 aa15.43■□□□□ 0.06
SKA2-204ENST00000578519 PRDM15P57071 1507 aaPredicted RBP15.43■□□□□ 0.06
SKA2-204ENST00000578519 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
SKA2-204ENST00000578519 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
SKA2-204ENST00000578519 CCDC7Q96M83 1385 aa15.42■□□□□ 0.06
SKA2-204ENST00000578519 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
SKA2-204ENST00000578519 MAP3K4Q9Y6R4 1608 aa15.42■□□□□ 0.06
SKA2-204ENST00000578519 WASHC2AQ641Q2 1341 aa15.42■□□□□ 0.06
SKA2-204ENST00000578519 ROCK2O75116 1388 aaKnown RBP15.41■□□□□ 0.06
SKA2-204ENST00000578519 TRPM2O94759 1503 aa15.41■□□□□ 0.06
SKA2-204ENST00000578519 LMTK2Q8IWU2 1503 aa15.41■□□□□ 0.06
SKA2-204ENST00000578519 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
SKA2-204ENST00000578519 PRAG1Q86YV5 1406 aa15.39■□□□□ 0.05
SKA2-204ENST00000578519 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
SKA2-204ENST00000578519 RAPGEF3O95398 923 aa15.38■□□□□ 0.05
SKA2-204ENST00000578519 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
SKA2-204ENST00000578519 NEURL4Q96JN8 1562 aa15.37■□□□□ 0.05
SKA2-204ENST00000578519 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
SKA2-204ENST00000578519 GGT6Q6P531 493 aa15.37■□□□□ 0.05
SKA2-204ENST00000578519 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
SKA2-204ENST00000578519 E9PCH4 1651 aa15.35■□□□□ 0.05
SKA2-204ENST00000578519 BCORL1Q5H9F3 1711 aa15.35■□□□□ 0.05
SKA2-204ENST00000578519 DIP2BQ9P265 1576 aa15.34■□□□□ 0.05
SKA2-204ENST00000578519 KIF7Q2M1P5 1343 aa15.34■□□□□ 0.05
SKA2-204ENST00000578519 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
SKA2-204ENST00000578519 EFCAB6Q5THR3 1501 aa15.33■□□□□ 0.05
SKA2-204ENST00000578519 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
SKA2-204ENST00000578519 LAMC1P11047 1609 aa15.32■□□□□ 0.04
SKA2-204ENST00000578519 CDCA8Q53HL2 280 aa15.31■□□□□ 0.04
SKA2-204ENST00000578519 MROH1Q8NDA8 1641 aa15.31■□□□□ 0.04
SKA2-204ENST00000578519 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
SKA2-204ENST00000578519 ZMYM4Q5VZL5 1548 aa15.3■□□□□ 0.04
SKA2-204ENST00000578519 POLR1AO95602 1720 aaPredicted RBP15.29■□□□□ 0.04
SKA2-204ENST00000578519 RICTORQ6R327 1708 aa15.29■□□□□ 0.04
SKA2-204ENST00000578519 TRPM1Q7Z4N2 1603 aa15.29■□□□□ 0.04
SKA2-204ENST00000578519 ABCA6Q8N139 1617 aa15.29■□□□□ 0.04
SKA2-204ENST00000578519 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
SKA2-204ENST00000578519 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
SKA2-204ENST00000578519 CEP152O94986 1710 aa15.29■□□□□ 0.04
SKA2-204ENST00000578519 ARHGAP31Q2M1Z3 1444 aa15.28■□□□□ 0.04
SKA2-204ENST00000578519 TMF1P82094 1093 aa15.28■□□□□ 0.04
SKA2-204ENST00000578519 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
SKA2-204ENST00000578519 FRMPD1Q5SYB0 1578 aa15.28■□□□□ 0.04
SKA2-204ENST00000578519 EIF3AQ14152 1382 aaKnown RBP15.27■□□□□ 0.04
SKA2-204ENST00000578519 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.04
SKA2-204ENST00000578519 CLTCL1P53675 1640 aa15.26■□□□□ 0.03
SKA2-204ENST00000578519 ABCC3O15438 1527 aa15.26■□□□□ 0.03
SKA2-204ENST00000578519 ZC3H13Q5T200 1668 aaKnown RBP15.25■□□□□ 0.03
SKA2-204ENST00000578519 KTN1Q86UP2 1357 aaKnown RBP15.25■□□□□ 0.03
SKA2-204ENST00000578519 CHGAP10645 457 aaKnown RBP15.25■□□□□ 0.03
SKA2-204ENST00000578519 MYOM2P54296 1465 aa15.25■□□□□ 0.03
SKA2-204ENST00000578519 NBPF1Q3BBV0 1214 aa15.24■□□□□ 0.03
SKA2-204ENST00000578519 PRKRIP1Q9H875 184 aaPredicted RBP15.24■□□□□ 0.03
SKA2-204ENST00000578519 NPATQ14207 1427 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms