RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 STRCQ7RTU9 1775 aa24.73■■□□□ 1.55
SREBF1-218ENST00000578469 HNRNPMP52272 730 aaKnown RBP eCLIP24.73■■□□□ 1.551e-7■□□□□ 8.7
SREBF1-218ENST00000578469 ABCC1P33527 1531 aa24.72■■□□□ 1.55
SREBF1-218ENST00000578469 CCDC141Q6ZP82 1450 aa24.72■■□□□ 1.55
SREBF1-218ENST00000578469 NCOA1Q15788 1441 aa24.72■■□□□ 1.55
SREBF1-218ENST00000578469 AGLP35573 1532 aa24.71■■□□□ 1.55
SREBF1-218ENST00000578469 MBD5Q9P267 1494 aa24.71■■□□□ 1.55
SREBF1-218ENST00000578469 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
SREBF1-218ENST00000578469 C3P01024 1663 aa24.7■■□□□ 1.54
SREBF1-218ENST00000578469 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
SREBF1-218ENST00000578469 PTPRTO14522 1441 aa24.67■■□□□ 1.54
SREBF1-218ENST00000578469 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
SREBF1-218ENST00000578469 TRAPPC8Q9Y2L5 1435 aa24.67■■□□□ 1.54
SREBF1-218ENST00000578469 SYCP2Q9BX26 1530 aa24.66■■□□□ 1.54
SREBF1-218ENST00000578469 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
SREBF1-218ENST00000578469 MAST1Q9Y2H9 1570 aa24.61■■□□□ 1.53
SREBF1-218ENST00000578469 KIDINS220Q9ULH0 1771 aa24.61■■□□□ 1.53
SREBF1-218ENST00000578469 TIMELESSQ9UNS1 1208 aa24.59■■□□□ 1.53
SREBF1-218ENST00000578469 ANKRD50Q9ULJ7 1429 aa24.59■■□□□ 1.53
SREBF1-218ENST00000578469 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
SREBF1-218ENST00000578469 KIF15Q9NS87 1388 aa24.56■■□□□ 1.52
SREBF1-218ENST00000578469 MPHOSPH9Q99550 1183 aa24.56■■□□□ 1.52
SREBF1-218ENST00000578469 NPATQ14207 1427 aa24.55■■□□□ 1.52
SREBF1-218ENST00000578469 IQSEC2Q5JU85 1478 aa24.55■■□□□ 1.52
SREBF1-218ENST00000578469 NEUROD1Q13562 356 aa24.53■■□□□ 1.52
SREBF1-218ENST00000578469 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
SREBF1-218ENST00000578469 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
SREBF1-218ENST00000578469 SPATA31D1Q6ZQQ2 1576 aa24.51■■□□□ 1.51
SREBF1-218ENST00000578469 LTBP4Q8N2S1 1624 aa24.51■■□□□ 1.51
SREBF1-218ENST00000578469 CAMSAP1Q5T5Y3 1602 aa24.5■■□□□ 1.51
SREBF1-218ENST00000578469 PLXNC1O60486 1568 aa24.49■■□□□ 1.51
SREBF1-218ENST00000578469 ATP7AQ04656 1500 aa24.48■■□□□ 1.51
SREBF1-218ENST00000578469 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
SREBF1-218ENST00000578469 ZMYM3Q14202 1370 aa24.47■■□□□ 1.51
SREBF1-218ENST00000578469 RTEL1-TNFRSF6BF6WH68 1400 aa24.45■■□□□ 1.51
SREBF1-218ENST00000578469 SOCS7O14512 581 aa24.45■■□□□ 1.5
SREBF1-218ENST00000578469 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
SREBF1-218ENST00000578469 INO80Q9ULG1 1556 aaPredicted RBP24.44■■□□□ 1.5
SREBF1-218ENST00000578469 DUOX2Q9NRD8 1548 aa24.43■■□□□ 1.5
SREBF1-218ENST00000578469 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
SREBF1-218ENST00000578469 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
SREBF1-218ENST00000578469 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
SREBF1-218ENST00000578469 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
SREBF1-218ENST00000578469 A2MP01023 1474 aa24.42■■□□□ 1.5
SREBF1-218ENST00000578469 PZPP20742 1482 aa24.42■■□□□ 1.5
SREBF1-218ENST00000578469 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
SREBF1-218ENST00000578469 NUP155O75694 1391 aa24.41■■□□□ 1.5
SREBF1-218ENST00000578469 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
SREBF1-218ENST00000578469 PLA2R1Q13018 1463 aa24.4■■□□□ 1.5
SREBF1-218ENST00000578469 CEP170BQ9Y4F5 1589 aaPredicted RBP24.38■■□□□ 1.49
SREBF1-218ENST00000578469 ERBINQ96RT1 1412 aa24.38■■□□□ 1.49
SREBF1-218ENST00000578469 PKD2Q13563 968 aa24.38■■□□□ 1.49
SREBF1-218ENST00000578469 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
SREBF1-218ENST00000578469 ANKRD30BQ9BXX2 1392 aa24.35■■□□□ 1.49
SREBF1-218ENST00000578469 GGT6Q6P531 493 aa24.35■■□□□ 1.49
SREBF1-218ENST00000578469 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
SREBF1-218ENST00000578469 ZNF335Q9H4Z2 1342 aaPredicted RBP24.34■■□□□ 1.49
SREBF1-218ENST00000578469 PPP1R15AO75807 674 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-218ENST00000578469 FOXD1Q16676 465 aa24.33■■□□□ 1.49
SREBF1-218ENST00000578469 UBAP1LF5GYI3 381 aa24.31■■□□□ 1.48
SREBF1-218ENST00000578469 UNC13BO14795 1591 aa24.31■■□□□ 1.48
SREBF1-218ENST00000578469 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
SREBF1-218ENST00000578469 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
SREBF1-218ENST00000578469 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
SREBF1-218ENST00000578469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.24■■□□□ 1.47
SREBF1-218ENST00000578469 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
SREBF1-218ENST00000578469 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
SREBF1-218ENST00000578469 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
SREBF1-218ENST00000578469 TNRQ92752 1358 aa24.17■■□□□ 1.46
SREBF1-218ENST00000578469 EIF2AK4Q9P2K8 1649 aaKnown RBP24.17■■□□□ 1.46
SREBF1-218ENST00000578469 DIEXFQ68CQ4 756 aaKnown RBP24.17■■□□□ 1.46
SREBF1-218ENST00000578469 CPS1P31327 1500 aa24.16■■□□□ 1.46
SREBF1-218ENST00000578469 KANK1Q14678 1352 aa24.16■■□□□ 1.46
SREBF1-218ENST00000578469 L3MBTL2Q969R5 705 aa24.15■■□□□ 1.46
SREBF1-218ENST00000578469 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
SREBF1-218ENST00000578469 KIF3BO15066 747 aa24.14■■□□□ 1.45
SREBF1-218ENST00000578469 DEPDC5O75140 1603 aa24.12■■□□□ 1.45
SREBF1-218ENST00000578469 NEURL4Q96JN8 1562 aa24.11■■□□□ 1.45
SREBF1-218ENST00000578469 WASHC2CQ9Y4E1 1318 aa24.1■■□□□ 1.45
SREBF1-218ENST00000578469 TOM1O60784 492 aa24.1■■□□□ 1.45
SREBF1-218ENST00000578469 NLRP1Q9C000 1473 aa24.09■■□□□ 1.45
SREBF1-218ENST00000578469 ANKLE2Q86XL3 938 aa24.08■■□□□ 1.45
SREBF1-218ENST00000578469 PIP4K2BP78356 416 aa24.07■■□□□ 1.44
SREBF1-218ENST00000578469 FBXO31Q5XUX0 539 aaPredicted RBP24.07■■□□□ 1.44
SREBF1-218ENST00000578469 THEMISQ8N1K5 641 aaPredicted RBP24.06■■□□□ 1.44
SREBF1-218ENST00000578469 UGGT1Q9NYU2 1555 aa24.05■■□□□ 1.44
SREBF1-218ENST00000578469 CCDC144AA2RUR9 1427 aa24.05■■□□□ 1.44
SREBF1-218ENST00000578469 PRDM15P57071 1507 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-218ENST00000578469 MED1Q15648 1581 aaPredicted RBP24.03■■□□□ 1.44
SREBF1-218ENST00000578469 HSPA1LP34931 641 aa24.03■■□□□ 1.44
SREBF1-218ENST00000578469 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
SREBF1-218ENST00000578469 TET3O43151 1660 aa24.02■■□□□ 1.44
SREBF1-218ENST00000578469 NPHP4O75161 1426 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-218ENST00000578469 RNF17Q9BXT8 1623 aaKnown RBP24■■□□□ 1.43
SREBF1-218ENST00000578469 MED14O60244 1454 aa24■■□□□ 1.43
SREBF1-218ENST00000578469 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
SREBF1-218ENST00000578469 MROH1Q8NDA8 1641 aa23.98■■□□□ 1.43
SREBF1-218ENST00000578469 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
SREBF1-218ENST00000578469 E9PCH4 1651 aa23.95■■□□□ 1.43
SREBF1-218ENST00000578469 LMTK2Q8IWU2 1503 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms