RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 C6orf132Q5T0Z8 1188 aa5.07□□□□□ -1.6
PTP4A1-204ENST00000578299 BARGINQ6ZT62 677 aa5.07□□□□□ -1.6
PTP4A1-204ENST00000578299 CERKQ8TCT0 537 aa5.07□□□□□ -1.6
PTP4A1-204ENST00000578299 PTPREP23469 700 aa5.06□□□□□ -1.6
PTP4A1-204ENST00000578299 HIC1Q14526 733 aa5.06□□□□□ -1.6
PTP4A1-204ENST00000578299 VARS2Q5ST30 1063 aaKnown RBP5.06□□□□□ -1.6
PTP4A1-204ENST00000578299 CDHR5Q9HBB8 845 aa5.06□□□□□ -1.6
PTP4A1-204ENST00000578299 FAM205CA6NFA0 338 aa5.05□□□□□ -1.6
PTP4A1-204ENST00000578299 GNPATO15228 680 aa5.05□□□□□ -1.6
PTP4A1-204ENST00000578299 LCE2DQ5TA82 110 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-204ENST00000578299 KRI1Q8N9T8 703 aaKnown RBP5.05□□□□□ -1.6
PTP4A1-204ENST00000578299 KCNH8Q96L42 1107 aa5.05□□□□□ -1.6
PTP4A1-204ENST00000578299 NPDC1Q9NQX5 325 aaPredicted RBP5.05□□□□□ -1.6
PTP4A1-204ENST00000578299 PBX2P40425 430 aa5.04□□□□□ -1.6
PTP4A1-204ENST00000578299 MINK1Q8N4C8 1332 aaPredicted RBP5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 PPP1R3GB7ZBB8 358 aa5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 MAP2K5Q13163 448 aa5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 ZNF687Q8N1G0 1237 aa5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 HS3ST6Q96QI5 342 aa5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 KCNK17Q96T54 332 aa5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 SLC24A3Q9HC58 644 aa5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 RBM27Q9P2N5 1060 aaKnown RBP5.03□□□□□ -1.6
PTP4A1-204ENST00000578299 ARHGAP33O14559 1287 aa5.02□□□□□ -1.61
PTP4A1-204ENST00000578299 COL9A1P20849 921 aa5.02□□□□□ -1.61
PTP4A1-204ENST00000578299 PRSS12P56730 875 aa5.02□□□□□ -1.61
PTP4A1-204ENST00000578299 AK7Q96M32 723 aa5.02□□□□□ -1.61
PTP4A1-204ENST00000578299 IRF6O14896 467 aa5.01□□□□□ -1.61
PTP4A1-204ENST00000578299 PADI6Q6TGC4 694 aa5.01□□□□□ -1.61
PTP4A1-204ENST00000578299 CDCA7LQ96GN5 454 aa5.01□□□□□ -1.61
PTP4A1-204ENST00000578299 POTEB3A0JP26 581 aa5□□□□□ -1.61
PTP4A1-204ENST00000578299 FECHP22830 423 aa5□□□□□ -1.61
PTP4A1-204ENST00000578299 PSEN2P49810 448 aa5□□□□□ -1.61
PTP4A1-204ENST00000578299 POTEBQ6S5H4 581 aa5□□□□□ -1.61
PTP4A1-204ENST00000578299 TTC13Q8NBP0 860 aa5□□□□□ -1.61
PTP4A1-204ENST00000578299 TRIM6-TRIM34B2RNG4 842 aa4.99□□□□□ -1.61
PTP4A1-204ENST00000578299 ONECUT3O60422 494 aaPredicted RBP4.99□□□□□ -1.61
PTP4A1-204ENST00000578299 POTEEQ6S8J3 1075 aa4.99□□□□□ -1.61
PTP4A1-204ENST00000578299 PACS2Q86VP3 889 aa4.99□□□□□ -1.61
PTP4A1-204ENST00000578299 CCDC102AQ96A19 550 aa4.99□□□□□ -1.61
PTP4A1-204ENST00000578299 SLC4A5Q9BY07 1137 aa4.99□□□□□ -1.61
PTP4A1-204ENST00000578299 OATP04181 439 aa4.98□□□□□ -1.61
PTP4A1-204ENST00000578299 ZBED2Q9BTP6 218 aa4.98□□□□□ -1.61
PTP4A1-204ENST00000578299 AXIN2Q9Y2T1 843 aa4.98□□□□□ -1.61
PTP4A1-204ENST00000578299 NBPF26B4DH59 902 aa4.97□□□□□ -1.61
PTP4A1-204ENST00000578299 TRIM66O15016 1216 aa4.97□□□□□ -1.61
PTP4A1-204ENST00000578299 DMRTA1Q5VZB9 504 aa4.97□□□□□ -1.61
PTP4A1-204ENST00000578299 TSKSQ9UJT2 592 aa4.97□□□□□ -1.61
PTP4A1-204ENST00000578299 ADGRG1Q9Y653 693 aa4.97□□□□□ -1.61
PTP4A1-204ENST00000578299 TK2O00142 265 aa4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 LSM11P83369 360 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 PROX2Q3B8N5 592 aa4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 RBM46Q8TBY0 533 aaKnown RBP4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 KIAA1468Q9P260 1216 aa4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 FAM198AQ9UFP1 575 aa4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 RABGEF1Q9UJ41 708 aa4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 VPS9D1Q9Y2B5 631 aa4.96□□□□□ -1.62
PTP4A1-204ENST00000578299 AMHR2Q16671 573 aa4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 FAM161AQ3B820 660 aa4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 METTL3Q86U44 580 aaKnown RBP4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 PXYLP1Q8TE99 480 aa4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 TATDN2Q93075 761 aa4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 EYA1Q99502 592 aa4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 PNMA3Q9UL41 463 aa4.95□□□□□ -1.62
PTP4A1-204ENST00000578299 POTEMA6NI47 508 aa4.94□□□□□ -1.62
PTP4A1-204ENST00000578299 PDE4DQ08499 809 aa4.94□□□□□ -1.62
PTP4A1-204ENST00000578299 NEUROD2Q15784 382 aa4.94□□□□□ -1.62
PTP4A1-204ENST00000578299 POTEGQ6S5H5 508 aa4.94□□□□□ -1.62
PTP4A1-204ENST00000578299 NUDT18Q6ZVK8 323 aa4.94□□□□□ -1.62
PTP4A1-204ENST00000578299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.93□□□□□ -1.62
PTP4A1-204ENST00000578299 CLCN1P35523 988 aa4.93□□□□□ -1.62
PTP4A1-204ENST00000578299 BRPF1P55201 1214 aaPredicted RBP4.93□□□□□ -1.62
PTP4A1-204ENST00000578299 ADGRD1Q6QNK2 874 aa4.93□□□□□ -1.62
PTP4A1-204ENST00000578299 PHOX2BQ99453 314 aa4.93□□□□□ -1.62
PTP4A1-204ENST00000578299 NBPF3Q9H094 633 aa4.93□□□□□ -1.62
PTP4A1-204ENST00000578299 RCCD1A6NED2 376 aa4.92□□□□□ -1.62
PTP4A1-204ENST00000578299 C3orf80F5H4A9 247 aa4.92□□□□□ -1.62
PTP4A1-204ENST00000578299 DNAJB2P25686 324 aa4.92□□□□□ -1.62
PTP4A1-204ENST00000578299 TTLL12Q14166 644 aaPredicted RBP4.92□□□□□ -1.62
PTP4A1-204ENST00000578299 ANKRD13DQ6ZTN6 518 aa4.92□□□□□ -1.62
PTP4A1-204ENST00000578299 LAPTM4BQ86VI4 370 aa4.92□□□□□ -1.62
PTP4A1-204ENST00000578299 BHMG1C9JSJ3 638 aaPredicted RBP4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 SMAPO00193 183 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 MDM2Q00987 491 aaPredicted RBP4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 FAM98CQ17RN3 349 aaKnown RBP4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 CDAN1Q8IWY9 1227 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 PARP9Q8IXQ6 854 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 STAC3Q96MF2 364 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 GPCPD1Q9NPB8 672 aa4.91□□□□□ -1.62
PTP4A1-204ENST00000578299 HRO43593 1189 aa4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 GIGYF2Q6Y7W6 1299 aaKnown RBP4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 MRPL50Q8N5N7 158 aaKnown RBP4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 TMUB1Q9BVT8 246 aa4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 KDM4CQ9H3R0 1056 aa4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 TMEM134Q9H6X4 195 aa4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 GPBP1L1Q9HC44 474 aaPredicted RBP4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 DAXXQ9UER7 740 aaPredicted RBP4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 SEPT9Q9UHD8 586 aaPredicted RBP4.9□□□□□ -1.63
PTP4A1-204ENST00000578299 SLC4A3P48751 1232 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms