RNA–Protein interactions for RNA: ENST00000578085.1

CCR7-202, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 3

Gene CCR7, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-202ENST00000578085 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
CCR7-202ENST00000578085 PZPP20742 1482 aa11.88□□□□□ -0.51
CCR7-202ENST00000578085 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
CCR7-202ENST00000578085 KIF3BO15066 747 aa11.87□□□□□ -0.51
CCR7-202ENST00000578085 PKD2Q13563 968 aa11.87□□□□□ -0.51
CCR7-202ENST00000578085 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
CCR7-202ENST00000578085 TNRQ92752 1358 aa11.87□□□□□ -0.51
CCR7-202ENST00000578085 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
CCR7-202ENST00000578085 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
CCR7-202ENST00000578085 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
CCR7-202ENST00000578085 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
CCR7-202ENST00000578085 LOC105371045A0A1W2PR82 267 aa11.84□□□□□ -0.51
CCR7-202ENST00000578085 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
CCR7-202ENST00000578085 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
CCR7-202ENST00000578085 MAST1Q9Y2H9 1570 aa11.84□□□□□ -0.51
CCR7-202ENST00000578085 ABCC3O15438 1527 aa11.83□□□□□ -0.52
CCR7-202ENST00000578085 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
CCR7-202ENST00000578085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCR7-202ENST00000578085 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
CCR7-202ENST00000578085 MIA2Q96PC5 1412 aa11.82□□□□□ -0.52
CCR7-202ENST00000578085 VWDEQ8N2E2 1590 aa11.82□□□□□ -0.52
CCR7-202ENST00000578085 WASHC2CQ9Y4E1 1318 aa11.82□□□□□ -0.52
CCR7-202ENST00000578085 ALKQ9UM73 1620 aa11.8□□□□□ -0.52
CCR7-202ENST00000578085 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
CCR7-202ENST00000578085 NLRP1Q9C000 1473 aa11.8□□□□□ -0.52
CCR7-202ENST00000578085 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
CCR7-202ENST00000578085 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
CCR7-202ENST00000578085 SHANK2Q9UPX8 1470 aa11.79□□□□□ -0.52
CCR7-202ENST00000578085 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
CCR7-202ENST00000578085 EIF2AK4Q9P2K8 1649 aaKnown RBP11.78□□□□□ -0.52
CCR7-202ENST00000578085 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
CCR7-202ENST00000578085 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
CCR7-202ENST00000578085 TSPY4P0CV99 314 aa11.78□□□□□ -0.52
CCR7-202ENST00000578085 TSPY10P0CW01 314 aa11.78□□□□□ -0.52
CCR7-202ENST00000578085 DEPDC5O75140 1603 aa11.78□□□□□ -0.52
CCR7-202ENST00000578085 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
CCR7-202ENST00000578085 MED14O60244 1454 aa11.77□□□□□ -0.52
CCR7-202ENST00000578085 CPS1P31327 1500 aa11.77□□□□□ -0.52
CCR7-202ENST00000578085 SOCS7O14512 581 aa11.77□□□□□ -0.53
CCR7-202ENST00000578085 CEP152O94986 1710 aa11.77□□□□□ -0.53
CCR7-202ENST00000578085 STRCP1A6NGW2 1772 aa11.75□□□□□ -0.53
CCR7-202ENST00000578085 ABCC5O15440 1437 aa11.75□□□□□ -0.53
CCR7-202ENST00000578085 PRDM15P57071 1507 aaPredicted RBP11.75□□□□□ -0.53
CCR7-202ENST00000578085 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
CCR7-202ENST00000578085 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
CCR7-202ENST00000578085 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
CCR7-202ENST00000578085 HSPA1LP34931 641 aa11.74□□□□□ -0.53
CCR7-202ENST00000578085 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
CCR7-202ENST00000578085 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
CCR7-202ENST00000578085 UBR1Q8IWV7 1749 aa11.73□□□□□ -0.53
CCR7-202ENST00000578085 THEMISQ8N1K5 641 aaPredicted RBP11.73□□□□□ -0.53
CCR7-202ENST00000578085 KIF15Q9NS87 1388 aa11.73□□□□□ -0.53
CCR7-202ENST00000578085 PTPN23Q9H3S7 1636 aa11.72□□□□□ -0.53
CCR7-202ENST00000578085 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
CCR7-202ENST00000578085 LRRC7Q96NW7 1537 aa11.71□□□□□ -0.53
CCR7-202ENST00000578085 SCAF1Q9H7N4 1312 aaKnown RBP11.71□□□□□ -0.53
CCR7-202ENST00000578085 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
CCR7-202ENST00000578085 DAPK1P53355 1430 aa11.7□□□□□ -0.54
CCR7-202ENST00000578085 ERBINQ96RT1 1412 aa11.7□□□□□ -0.54
CCR7-202ENST00000578085 ARHGAP31Q2M1Z3 1444 aa11.69□□□□□ -0.54
CCR7-202ENST00000578085 RRP7BPQ9NSQ0 103 aa11.69□□□□□ -0.54
CCR7-202ENST00000578085 SYNMO15061 1565 aa11.69□□□□□ -0.54
CCR7-202ENST00000578085 SLIT1O75093 1534 aa11.69□□□□□ -0.54
CCR7-202ENST00000578085 SCAF11Q99590 1463 aaKnown RBP11.69□□□□□ -0.54
CCR7-202ENST00000578085 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
CCR7-202ENST00000578085 TOM1O60784 492 aa11.68□□□□□ -0.54
CCR7-202ENST00000578085 LTKP29376 864 aa11.68□□□□□ -0.54
CCR7-202ENST00000578085 PIK3C2BO00750 1634 aa11.68□□□□□ -0.54
CCR7-202ENST00000578085 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.54
CCR7-202ENST00000578085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCR7-202ENST00000578085 CFAP65Q6ZU64 1925 aaKnown RBP11.64□□□□□ -0.55
CCR7-202ENST00000578085 SENP3Q9H4L4 574 aaPredicted RBP11.64□□□□□ -0.55
CCR7-202ENST00000578085 CHIC2Q9UKJ5 165 aa11.64□□□□□ -0.55
CCR7-202ENST00000578085 XIRP1Q702N8 1843 aaKnown RBP11.64□□□□□ -0.55
CCR7-202ENST00000578085 TXNDC2Q86VQ3 553 aa11.63□□□□□ -0.55
CCR7-202ENST00000578085 EFCAB6Q5THR3 1501 aa11.63□□□□□ -0.55
CCR7-202ENST00000578085 TMEM2Q9UHN6 1383 aa11.63□□□□□ -0.55
CCR7-202ENST00000578085 ADGRL2O95490 1459 aa11.62□□□□□ -0.55
CCR7-202ENST00000578085 NOS1P29475 1434 aa11.61□□□□□ -0.55
CCR7-202ENST00000578085 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
CCR7-202ENST00000578085 ADGRB3O60242 1522 aa11.6□□□□□ -0.55
CCR7-202ENST00000578085 TET3O43151 1660 aa11.6□□□□□ -0.55
CCR7-202ENST00000578085 IDI1Q13907 227 aa11.6□□□□□ -0.55
CCR7-202ENST00000578085 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
CCR7-202ENST00000578085 KANK1Q14678 1352 aa11.59□□□□□ -0.55
CCR7-202ENST00000578085 APLP2Q06481 763 aa11.57□□□□□ -0.56
CCR7-202ENST00000578085 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
CCR7-202ENST00000578085 TMEM94Q12767 1356 aa11.56□□□□□ -0.56
CCR7-202ENST00000578085 NWD1Q149M9 1564 aa11.56□□□□□ -0.56
CCR7-202ENST00000578085 SLC26A8Q96RN1 970 aa11.56□□□□□ -0.56
CCR7-202ENST00000578085 EID1Q9Y6B2 187 aa11.56□□□□□ -0.56
CCR7-202ENST00000578085 ZFYVE9O95405 1425 aa11.55□□□□□ -0.56
CCR7-202ENST00000578085 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
CCR7-202ENST00000578085 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
CCR7-202ENST00000578085 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
CCR7-202ENST00000578085 RGS17Q9UGC6 210 aaPredicted RBP11.54□□□□□ -0.56
CCR7-202ENST00000578085 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
CCR7-202ENST00000578085 UNC13BO14795 1591 aa11.54□□□□□ -0.56
CCR7-202ENST00000578085 GCC2Q8IWJ2 1684 aa11.53□□□□□ -0.56
CCR7-202ENST00000578085 RPRD2Q5VT52 1461 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms