RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
KRT39-203ENST00000578078 NUBP1P53384 320 aa9.63□□□□□ -0.87
KRT39-203ENST00000578078 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
KRT39-203ENST00000578078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.62□□□□□ -0.87
KRT39-203ENST00000578078 IL27Q8NEV9 243 aa9.62□□□□□ -0.87
KRT39-203ENST00000578078 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
KRT39-203ENST00000578078 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
KRT39-203ENST00000578078 APBB1O00213 710 aa9.61□□□□□ -0.87
KRT39-203ENST00000578078 SEMA3EO15041 775 aa9.61□□□□□ -0.87
KRT39-203ENST00000578078 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
KRT39-203ENST00000578078 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
KRT39-203ENST00000578078 ARID3CA6NKF2 412 aa9.61□□□□□ -0.87
KRT39-203ENST00000578078 TCOF1Q13428 1488 aaKnown RBP9.6□□□□□ -0.87
KRT39-203ENST00000578078 ITSN2Q9NZM3 1697 aa9.6□□□□□ -0.87
KRT39-203ENST00000578078 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
KRT39-203ENST00000578078 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
KRT39-203ENST00000578078 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
KRT39-203ENST00000578078 MIA2Q96PC5 1412 aa9.59□□□□□ -0.87
KRT39-203ENST00000578078 ADCY10Q96PN6 1610 aa9.59□□□□□ -0.87
KRT39-203ENST00000578078 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
KRT39-203ENST00000578078 GCC2Q8IWJ2 1684 aa9.58□□□□□ -0.88
KRT39-203ENST00000578078 NEFLP07196 543 aa9.58□□□□□ -0.88
KRT39-203ENST00000578078 AK7Q96M32 723 aa9.58□□□□□ -0.88
KRT39-203ENST00000578078 MAPKBP1O60336 1514 aa9.57□□□□□ -0.88
KRT39-203ENST00000578078 EIF5BO60841 1220 aaKnown RBP9.57□□□□□ -0.88
KRT39-203ENST00000578078 CHRM1P11229 460 aaPredicted RBP9.57□□□□□ -0.88
KRT39-203ENST00000578078 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
KRT39-203ENST00000578078 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
KRT39-203ENST00000578078 ABCA8O94911 1581 aa9.56□□□□□ -0.88
KRT39-203ENST00000578078 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
KRT39-203ENST00000578078 PLB1Q6P1J6 1458 aa9.56□□□□□ -0.88
KRT39-203ENST00000578078 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
KRT39-203ENST00000578078 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
KRT39-203ENST00000578078 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
KRT39-203ENST00000578078 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
KRT39-203ENST00000578078 CAPN15O75808 1086 aa9.54□□□□□ -0.88
KRT39-203ENST00000578078 E2F4Q16254 413 aa9.54□□□□□ -0.88
KRT39-203ENST00000578078 PTPRKQ15262 1439 aa9.53□□□□□ -0.88
KRT39-203ENST00000578078 AKNAQ7Z591 1439 aa9.53□□□□□ -0.88
KRT39-203ENST00000578078 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
KRT39-203ENST00000578078 KIF14Q15058 1648 aa9.53□□□□□ -0.88
KRT39-203ENST00000578078 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
KRT39-203ENST00000578078 NAIPQ13075 1403 aa9.52□□□□□ -0.89
KRT39-203ENST00000578078 UACAQ9BZF9 1416 aa9.51□□□□□ -0.89
KRT39-203ENST00000578078 ADGBQ8N7X0 1667 aa9.51□□□□□ -0.89
KRT39-203ENST00000578078 OSCARQ8IYS5 282 aa9.51□□□□□ -0.89
KRT39-203ENST00000578078 CDC42BPAQ5VT25 1732 aa9.5□□□□□ -0.89
KRT39-203ENST00000578078 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
KRT39-203ENST00000578078 CROCC2H7BZ55 1655 aa9.5□□□□□ -0.89
KRT39-203ENST00000578078 PTPRGP23470 1445 aa9.49□□□□□ -0.89
KRT39-203ENST00000578078 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
KRT39-203ENST00000578078 DAPK1P53355 1430 aa9.49□□□□□ -0.89
KRT39-203ENST00000578078 FLIIQ13045 1269 aa9.48□□□□□ -0.89
KRT39-203ENST00000578078 CAMSAP2Q08AD1 1489 aa9.48□□□□□ -0.89
KRT39-203ENST00000578078 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
KRT39-203ENST00000578078 CLASP1Q7Z460 1538 aa9.48□□□□□ -0.89
KRT39-203ENST00000578078 ATP10BO94823 1461 aa9.47□□□□□ -0.89
KRT39-203ENST00000578078 ROCK1Q13464 1354 aa9.47□□□□□ -0.89
KRT39-203ENST00000578078 GPATCH8Q9UKJ3 1502 aaKnown RBP9.47□□□□□ -0.89
KRT39-203ENST00000578078 PLEKHD1A6NEE1 506 aa9.47□□□□□ -0.89
KRT39-203ENST00000578078 C11orf95C9JLR9 678 aaPredicted RBP9.47□□□□□ -0.89
KRT39-203ENST00000578078 ABCB7O75027 752 aa9.47□□□□□ -0.89
KRT39-203ENST00000578078 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
KRT39-203ENST00000578078 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
KRT39-203ENST00000578078 ABCC5O15440 1437 aa9.45□□□□□ -0.9
KRT39-203ENST00000578078 TRAIPQ9BWF2 469 aa9.45□□□□□ -0.9
KRT39-203ENST00000578078 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
KRT39-203ENST00000578078 CFDP1Q9UEE9 299 aaPredicted RBP9.45□□□□□ -0.9
KRT39-203ENST00000578078 ABCC2Q92887 1545 aa9.44□□□□□ -0.9
KRT39-203ENST00000578078 KDM6BO15054 1643 aa9.44□□□□□ -0.9
KRT39-203ENST00000578078 ABCC10Q5T3U5 1492 aa9.44□□□□□ -0.9
KRT39-203ENST00000578078 PREX2Q70Z35 1606 aa9.44□□□□□ -0.9
KRT39-203ENST00000578078 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
KRT39-203ENST00000578078 TRIM66O15016 1216 aa9.43□□□□□ -0.9
KRT39-203ENST00000578078 PDE4DQ08499 809 aa9.43□□□□□ -0.9
KRT39-203ENST00000578078 USP35Q9P2H5 1018 aa9.43□□□□□ -0.9
KRT39-203ENST00000578078 ERCC6L2Q5T890 1561 aa9.43□□□□□ -0.9
KRT39-203ENST00000578078 RAD21O60216 631 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 GLIPR1L2Q4G1C9 344 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 KRI1Q8N9T8 703 aaKnown RBP9.42□□□□□ -0.9
KRT39-203ENST00000578078 PKNOX2Q96KN3 472 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 ADGRL2O95490 1459 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 SHANK2Q9UPX8 1470 aa9.42□□□□□ -0.9
KRT39-203ENST00000578078 CDC42BPBQ9Y5S2 1711 aa9.41□□□□□ -0.9
KRT39-203ENST00000578078 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
KRT39-203ENST00000578078 A6NJR5 290 aa9.41□□□□□ -0.9
KRT39-203ENST00000578078 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
KRT39-203ENST00000578078 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
KRT39-203ENST00000578078 ARHGEF5Q12774 1597 aa9.4□□□□□ -0.9
KRT39-203ENST00000578078 TRAK2O60296 914 aa9.4□□□□□ -0.9
KRT39-203ENST00000578078 ZNF777Q9ULD5 760 aaPredicted RBP9.4□□□□□ -0.9
KRT39-203ENST00000578078 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
KRT39-203ENST00000578078 ZCCHC11Q5TAX3 1644 aaKnown RBP9.4□□□□□ -0.9
KRT39-203ENST00000578078 UHRF1BP1LA0JNW5 1464 aa9.4□□□□□ -0.91
KRT39-203ENST00000578078 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
KRT39-203ENST00000578078 ANKRD30AQ9BXX3 1397 aa9.39□□□□□ -0.91
KRT39-203ENST00000578078 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms