RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PLA2R1Q13018 1463 aa39.01■■■■□ 3.84
LIMD2-203ENST00000578067 UHRF1BP1Q6BDS2 1440 aa39■■■■□ 3.83
LIMD2-203ENST00000578067 DEPDC5O75140 1603 aa38.98■■■■□ 3.83
LIMD2-203ENST00000578067 DHX29Q7Z478 1369 aaKnown RBP38.98■■■■□ 3.83
LIMD2-203ENST00000578067 ATP10AO60312 1499 aa38.96■■■■□ 3.83
LIMD2-203ENST00000578067 YTHDC1Q96MU7 727 aaKnown RBP38.96■■■■□ 3.83
LIMD2-203ENST00000578067 KIDINS220Q9ULH0 1771 aa38.94■■■■□ 3.82
LIMD2-203ENST00000578067 POGZQ7Z3K3 1410 aa38.94■■■■□ 3.82
LIMD2-203ENST00000578067 EIF2AK4Q9P2K8 1649 aaKnown RBP38.93■■■■□ 3.82
LIMD2-203ENST00000578067 NEO1Q92859 1461 aa38.93■■■■□ 3.82
LIMD2-203ENST00000578067 ZNF326Q5BKZ1 582 aaKnown RBP38.91■■■■□ 3.82
LIMD2-203ENST00000578067 SPATA31E1Q6ZUB1 1445 aa38.91■■■■□ 3.82
LIMD2-203ENST00000578067 KDM5CP41229 1560 aa38.91■■■■□ 3.82
LIMD2-203ENST00000578067 KANK1Q14678 1352 aa38.87■■■■□ 3.81
LIMD2-203ENST00000578067 KIF3BO15066 747 aa38.87■■■■□ 3.81
LIMD2-203ENST00000578067 DCAF11Q8TEB1 546 aa38.87■■■■□ 3.81
LIMD2-203ENST00000578067 WASHC2AQ641Q2 1341 aa38.87■■■■□ 3.81
LIMD2-203ENST00000578067 MLH3Q9UHC1 1453 aa38.85■■■■□ 3.81
LIMD2-203ENST00000578067 VWDEQ8N2E2 1590 aa38.85■■■■□ 3.81
LIMD2-203ENST00000578067 RALGAPBQ86X10 1494 aa38.84■■■■□ 3.81
LIMD2-203ENST00000578067 E9PCH4 1651 aa38.83■■■■□ 3.81
LIMD2-203ENST00000578067 MAP3K4Q9Y6R4 1608 aa38.83■■■■□ 3.81
LIMD2-203ENST00000578067 KDM2AQ9Y2K7 1162 aa38.83■■■■□ 3.81
LIMD2-203ENST00000578067 GLI2P10070 1586 aa38.83■■■■□ 3.81
LIMD2-203ENST00000578067 PRDM15P57071 1507 aaPredicted RBP38.8■■■■□ 3.8
LIMD2-203ENST00000578067 TET3O43151 1660 aa38.8■■■■□ 3.8
LIMD2-203ENST00000578067 A2MP01023 1474 aa38.79■■■■□ 3.8
LIMD2-203ENST00000578067 HECW2Q9P2P5 1572 aa38.79■■■■□ 3.8
LIMD2-203ENST00000578067 MROH1Q8NDA8 1641 aa38.77■■■■□ 3.8
LIMD2-203ENST00000578067 ANP32CO43423 234 aa38.76■■■■□ 3.8
LIMD2-203ENST00000578067 USP47Q96K76 1375 aa38.75■■■■□ 3.79
LIMD2-203ENST00000578067 CCDC7Q96M83 1385 aa38.74■■■■□ 3.79
LIMD2-203ENST00000578067 RGL3Q3MIN7 710 aa38.73■■■■□ 3.79
LIMD2-203ENST00000578067 C11orf95C9JLR9 678 aaPredicted RBP38.73■■■■□ 3.79
LIMD2-203ENST00000578067 PTPRTO14522 1441 aa38.72■■■■□ 3.79
LIMD2-203ENST00000578067 TRPM2O94759 1503 aa38.72■■■■□ 3.79
LIMD2-203ENST00000578067 PRAG1Q86YV5 1406 aa38.69■■■■□ 3.78
LIMD2-203ENST00000578067 CARD11Q9BXL7 1154 aa38.68■■■■□ 3.78
LIMD2-203ENST00000578067 SPHKAPQ2M3C7 1700 aa38.68■■■■□ 3.78
LIMD2-203ENST00000578067 RAPGEF3O95398 923 aa38.67■■■■□ 3.78
LIMD2-203ENST00000578067 RNF17Q9BXT8 1623 aaKnown RBP38.66■■■■□ 3.78
LIMD2-203ENST00000578067 POLR1AO95602 1720 aaPredicted RBP38.66■■■■□ 3.78
LIMD2-203ENST00000578067 FRMPD1Q5SYB0 1578 aa38.66■■■■□ 3.78
LIMD2-203ENST00000578067 ABCA6Q8N139 1617 aa38.64■■■■□ 3.78
LIMD2-203ENST00000578067 DIP2BQ9P265 1576 aa38.63■■■■□ 3.77
LIMD2-203ENST00000578067 FAM69CQ0P6D2 419 aa38.63■■■■□ 3.77
LIMD2-203ENST00000578067 CCER2I3L3R5 266 aa38.62■■■■□ 3.77
LIMD2-203ENST00000578067 KIF7Q2M1P5 1343 aa38.62■■■■□ 3.77
LIMD2-203ENST00000578067 LMTK2Q8IWU2 1503 aa38.61■■■■□ 3.77
LIMD2-203ENST00000578067 CNTLNQ9NXG0 1405 aa38.61■■■■□ 3.77
LIMD2-203ENST00000578067 TRPM1Q7Z4N2 1603 aa38.61■■■■□ 3.77
LIMD2-203ENST00000578067 RICTORQ6R327 1708 aa38.6■■■■□ 3.77
LIMD2-203ENST00000578067 ROCK2O75116 1388 aaKnown RBP38.6■■■■□ 3.77
LIMD2-203ENST00000578067 EFCAB6Q5THR3 1501 aa38.58■■■■□ 3.77
LIMD2-203ENST00000578067 BCORL1Q5H9F3 1711 aa38.58■■■■□ 3.77
LIMD2-203ENST00000578067 CLTCL1P53675 1640 aa38.56■■■■□ 3.76
LIMD2-203ENST00000578067 CEP152O94986 1710 aa38.56■■■■□ 3.76
LIMD2-203ENST00000578067 SCAF1Q9H7N4 1312 aaKnown RBP38.55■■■■□ 3.76
LIMD2-203ENST00000578067 DIP2CQ9Y2E4 1556 aa38.53■■■■□ 3.76
LIMD2-203ENST00000578067 PPRC1Q5VV67 1664 aaKnown RBP38.51■■■■□ 3.76
LIMD2-203ENST00000578067 ARID4BQ4LE39 1312 aaPredicted RBP38.51■■■■□ 3.76
LIMD2-203ENST00000578067 GPRASP1Q5JY77 1395 aa38.5■■■■□ 3.75
LIMD2-203ENST00000578067 GGT6Q6P531 493 aa38.47■■■■□ 3.75
LIMD2-203ENST00000578067 STAC3Q96MF2 364 aa38.46■■■■□ 3.75
LIMD2-203ENST00000578067 LAMC1P11047 1609 aa38.45■■■■□ 3.75
LIMD2-203ENST00000578067 NEURL4Q96JN8 1562 aa38.45■■■■□ 3.75
LIMD2-203ENST00000578067 ST20-MTHFSA0A0A6YYL1 179 aa38.44■■■■□ 3.74
LIMD2-203ENST00000578067 NBPF1Q3BBV0 1214 aa38.44■■■■□ 3.74
LIMD2-203ENST00000578067 YEATS2Q9ULM3 1422 aa38.4■■■■□ 3.74
LIMD2-203ENST00000578067 ZMYM4Q5VZL5 1548 aa38.38■■■■□ 3.73
LIMD2-203ENST00000578067 ABCC3O15438 1527 aa38.38■■■■□ 3.73
LIMD2-203ENST00000578067 MADDQ8WXG6 1647 aa38.37■■■■□ 3.73
LIMD2-203ENST00000578067 WASHC2CQ9Y4E1 1318 aa38.36■■■■□ 3.73
LIMD2-203ENST00000578067 TSPOAP1O95153 1857 aa38.36■■■■□ 3.73
LIMD2-203ENST00000578067 NPATQ14207 1427 aa38.35■■■■□ 3.73
LIMD2-203ENST00000578067 UGGT1Q9NYU2 1555 aa38.35■■■■□ 3.73
LIMD2-203ENST00000578067 POLR3GLQ9BT43 218 aa38.3■■■■□ 3.72
LIMD2-203ENST00000578067 KIF1BO60333 1816 aa38.3■■■■□ 3.72
LIMD2-203ENST00000578067 GTF3C3Q9Y5Q9 886 aa38.29■■■■□ 3.72
LIMD2-203ENST00000578067 CAMSAP1Q5T5Y3 1602 aa38.27■■■■□ 3.72
LIMD2-203ENST00000578067 PRKRIP1Q9H875 184 aaPredicted RBP38.26■■■■□ 3.72
LIMD2-203ENST00000578067 ZC3H13Q5T200 1668 aaKnown RBP38.22■■■■□ 3.71
LIMD2-203ENST00000578067 MYOM2P54296 1465 aa38.21■■■■□ 3.71
LIMD2-203ENST00000578067 KIF13AQ9H1H9 1805 aa38.2■■■■□ 3.71
LIMD2-203ENST00000578067 ADGRB3O60242 1522 aa38.19■■■■□ 3.7
LIMD2-203ENST00000578067 MROH2AA6NES4 1674 aa38.18■■■■□ 3.7
LIMD2-203ENST00000578067 ARHGAP31Q2M1Z3 1444 aa38.18■■■■□ 3.7
LIMD2-203ENST00000578067 NOS1P29475 1434 aa38.17■■■■□ 3.7
LIMD2-203ENST00000578067 TESK2Q96S53 571 aa38.15■■■■□ 3.7
LIMD2-203ENST00000578067 IFT172Q9UG01 1749 aa38.15■■■■□ 3.7
LIMD2-203ENST00000578067 KIAA1210Q9ULL0 1709 aa38.15■■■■□ 3.7
LIMD2-203ENST00000578067 CFAP65Q6ZU64 1925 aaKnown RBP38.13■■■■□ 3.69
LIMD2-203ENST00000578067 REREQ9P2R6 1566 aa38.13■■■■□ 3.69
LIMD2-203ENST00000578067 IQGAP1P46940 1657 aa38.12■■■■□ 3.69
LIMD2-203ENST00000578067 SIGLEC1Q9BZZ2 1709 aa38.11■■■■□ 3.69
LIMD2-203ENST00000578067 COL17A1Q9UMD9 1497 aaPredicted RBP38.11■■■■□ 3.69
LIMD2-203ENST00000578067 CHGAP10645 457 aaKnown RBP38.09■■■■□ 3.69
LIMD2-203ENST00000578067 SCAF11Q99590 1463 aaKnown RBP38.08■■■■□ 3.69
LIMD2-203ENST00000578067 ADGRF5Q8IZF2 1346 aa38.08■■■■□ 3.69
LIMD2-203ENST00000578067 NRXN1Q9ULB1 1477 aa38.07■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms