RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 KIF20AO95235 890 aa5.45□□□□□ -1.54
CDH8-205ENST00000577730 WWC1Q8IX03 1113 aa5.45□□□□□ -1.54
CDH8-205ENST00000577730 NBPF1Q3BBV0 1214 aa5.44□□□□□ -1.54
CDH8-205ENST00000577730 CCDC94Q9BW85 323 aaPredicted RBP5.44□□□□□ -1.54
CDH8-205ENST00000577730 PPP4R3BQ5MIZ7 849 aa5.44□□□□□ -1.54
CDH8-205ENST00000577730 HSP90B1P14625 803 aaKnown RBP5.44□□□□□ -1.54
CDH8-205ENST00000577730 KNSTRNQ9Y448 316 aa5.44□□□□□ -1.54
CDH8-205ENST00000577730 ST18O60284 1047 aa5.44□□□□□ -1.54
CDH8-205ENST00000577730 PPP1R15AO75807 674 aaPredicted RBP5.44□□□□□ -1.54
CDH8-205ENST00000577730 RALBP1Q15311 655 aa5.44□□□□□ -1.54
CDH8-205ENST00000577730 CCDC112Q8NEF3 446 aa5.43□□□□□ -1.54
CDH8-205ENST00000577730 CFAP53Q96M91 514 aa5.43□□□□□ -1.54
CDH8-205ENST00000577730 CCAR2Q8N163 923 aaKnown RBP5.43□□□□□ -1.54
CDH8-205ENST00000577730 SSR1P43307 286 aaKnown RBP5.43□□□□□ -1.54
CDH8-205ENST00000577730 NUCB2P80303 420 aa5.43□□□□□ -1.54
CDH8-205ENST00000577730 CRBNQ96SW2 442 aa5.43□□□□□ -1.54
CDH8-205ENST00000577730 CHIC2Q9UKJ5 165 aa5.43□□□□□ -1.54
CDH8-205ENST00000577730 LMOD3Q0VAK6 560 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 CCDC191Q8NCU4 936 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 MCM4P33991 863 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 CARD11Q9BXL7 1154 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 CAVIN1Q6NZI2 390 aaKnown RBP5.42□□□□□ -1.54
CDH8-205ENST00000577730 CTR9Q6PD62 1173 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 P3H3Q8IVL6 736 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 TRERF1Q96PN7 1200 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 VGLL3A8MV65 326 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 HMGB1P09429 215 aaKnown RBP5.42□□□□□ -1.54
CDH8-205ENST00000577730 MCM5P33992 734 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 NEUROD2Q15784 382 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 TNNT1P13805 278 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 ERCC4Q92889 916 aaPredicted RBP5.42□□□□□ -1.54
CDH8-205ENST00000577730 KDM2AQ9Y2K7 1162 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 CCDC9Q9Y3X0 531 aaKnown RBP5.42□□□□□ -1.54
CDH8-205ENST00000577730 ATP6V1DQ9Y5K8 247 aa5.42□□□□□ -1.54
CDH8-205ENST00000577730 DHX57Q6P158 1386 aaKnown RBP5.42□□□□□ -1.54
CDH8-205ENST00000577730 RNF20Q5VTR2 975 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 TPD52L1Q16890 204 aaPredicted RBP5.41□□□□□ -1.54
CDH8-205ENST00000577730 BAZ1BQ9UIG0 1483 aaKnown RBP5.41□□□□□ -1.54
CDH8-205ENST00000577730 GOLGA6L19H0YKK7 550 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 NEFHP12036 1026 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 TDO2P48775 406 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 CDCA8Q53HL2 280 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 HOMER1Q86YM7 354 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 TSPY26PQ9H489 355 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 FAM193AP78312 1265 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 XPCQ01831 940 aaPredicted RBP5.41□□□□□ -1.54
CDH8-205ENST00000577730 PRKRIP1Q9H875 184 aaPredicted RBP5.41□□□□□ -1.54
CDH8-205ENST00000577730 MCTP1Q6DN14 999 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 MBD3O95983 291 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 RNF214Q8ND24 703 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 CGNL1Q0VF96 1302 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 CCNB3Q8WWL7 1395 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 CCDC70Q6NSX1 233 aa5.41□□□□□ -1.54
CDH8-205ENST00000577730 CDR1P51861 262 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 FOXD4L5Q5VV16 416 aaPredicted RBP5.4□□□□□ -1.54
CDH8-205ENST00000577730 FOXD4L4Q8WXT5 416 aaPredicted RBP5.4□□□□□ -1.54
CDH8-205ENST00000577730 PRIMPOLQ96LW4 560 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 RBM28Q9NW13 759 aaKnown RBP5.4□□□□□ -1.54
CDH8-205ENST00000577730 SETD5Q9C0A6 1442 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 BECN2A8MW95 431 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 TRIM6-TRIM34B2RNG4 842 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 TRIM34Q9BYJ4 488 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 GOLGA2Q08379 1002 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 STK11IPQ8N1F8 1099 aa5.4□□□□□ -1.54
CDH8-205ENST00000577730 C22orf23Q9BZE7 217 aa5.4□□□□□ -1.55
CDH8-205ENST00000577730 PLIN1O60240 522 aa5.4□□□□□ -1.55
CDH8-205ENST00000577730 OFD1O75665 1012 aa5.4□□□□□ -1.55
CDH8-205ENST00000577730 NCBP3Q53F19 620 aaKnown RBP5.4□□□□□ -1.55
CDH8-205ENST00000577730 RRAGDQ9NQL2 400 aaPredicted RBP5.39□□□□□ -1.55
CDH8-205ENST00000577730 RSPH4AQ5TD94 716 aa5.39□□□□□ -1.55
CDH8-205ENST00000577730 ZNF622Q969S3 477 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDH8-205ENST00000577730 PHLDB1Q86UU1 1377 aa5.39□□□□□ -1.55
CDH8-205ENST00000577730 GTF2F1P35269 517 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDH8-205ENST00000577730 KLHL34Q8N239 644 aa5.39□□□□□ -1.55
CDH8-205ENST00000577730 IPO8O15397 1037 aaKnown RBP5.39□□□□□ -1.55
CDH8-205ENST00000577730 KIAA0754O94854 1291 aa5.39□□□□□ -1.55
CDH8-205ENST00000577730 ITPRIPQ8IWB1 547 aa5.39□□□□□ -1.55
CDH8-205ENST00000577730 XRCC6P12956 609 aaKnown RBP eCLIP5.39□□□□□ -1.55
CDH8-205ENST00000577730 PAIP2Q9BPZ3 127 aaKnown RBP5.39□□□□□ -1.55
CDH8-205ENST00000577730 HDAC5Q9UQL6 1122 aa5.39□□□□□ -1.55
CDH8-205ENST00000577730 TULP1O00294 542 aaPredicted RBP5.38□□□□□ -1.55
CDH8-205ENST00000577730 CT47A1Q5JQC4 288 aaPredicted RBP5.38□□□□□ -1.55
CDH8-205ENST00000577730 DCTN1Q14203 1278 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 CENPJQ9HC77 1338 aaPredicted RBP5.38□□□□□ -1.55
CDH8-205ENST00000577730 NOL10Q9BSC4 688 aaKnown RBP5.38□□□□□ -1.55
CDH8-205ENST00000577730 SPDYE4A6NLX3 237 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 CIZ1Q9ULV3 898 aaPredicted RBP5.38□□□□□ -1.55
CDH8-205ENST00000577730 TERF1P54274 439 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 TXLNBQ8N3L3 684 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 FAM107BQ9H098 131 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 RRP7BPQ9NSQ0 103 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 CCP110O43303 1012 aa5.38□□□□□ -1.55
CDH8-205ENST00000577730 UTP14CQ5TAP6 766 aaKnown RBP5.37□□□□□ -1.55
CDH8-205ENST00000577730 NLRP13Q86W25 1043 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 RUFY1Q96T51 708 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 EIF3JO75822 258 aaKnown RBP5.37□□□□□ -1.55
CDH8-205ENST00000577730 RRP12Q5JTH9 1297 aaKnown RBP5.37□□□□□ -1.55
CDH8-205ENST00000577730 KRT222Q8N1A0 295 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 RASSF4Q9H2L5 321 aa5.37□□□□□ -1.55
CDH8-205ENST00000577730 ZNF777Q9ULD5 760 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms