RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 NUBP1P53384 320 aa11.53□□□□□ -0.56
SMARCE1-212ENST00000577721 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
SMARCE1-212ENST00000577721 KIF21BO75037 1637 aa11.51□□□□□ -0.57
SMARCE1-212ENST00000577721 HS3ST6Q96QI5 342 aa11.51□□□□□ -0.57
SMARCE1-212ENST00000577721 PTPRMP28827 1452 aa11.51□□□□□ -0.57
SMARCE1-212ENST00000577721 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
SMARCE1-212ENST00000577721 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
SMARCE1-212ENST00000577721 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
SMARCE1-212ENST00000577721 NEO1Q92859 1461 aa11.48□□□□□ -0.57
SMARCE1-212ENST00000577721 MLECQ14165 292 aa11.46□□□□□ -0.57
SMARCE1-212ENST00000577721 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
SMARCE1-212ENST00000577721 HSPA2P54652 639 aa11.45□□□□□ -0.58
SMARCE1-212ENST00000577721 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-212ENST00000577721 ABCA9Q8IUA7 1624 aa11.45□□□□□ -0.58
SMARCE1-212ENST00000577721 DENND4BO75064 1496 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-212ENST00000577721 EHMT2Q96KQ7 1210 aa11.44□□□□□ -0.58
SMARCE1-212ENST00000577721 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
SMARCE1-212ENST00000577721 AKNAQ7Z591 1439 aa11.43□□□□□ -0.58
SMARCE1-212ENST00000577721 RAPGEF6Q8TEU7 1601 aa11.43□□□□□ -0.58
SMARCE1-212ENST00000577721 ADAMTSL3P82987 1691 aa11.43□□□□□ -0.58
SMARCE1-212ENST00000577721 NUP153P49790 1475 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-212ENST00000577721 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
SMARCE1-212ENST00000577721 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
SMARCE1-212ENST00000577721 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
SMARCE1-212ENST00000577721 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
SMARCE1-212ENST00000577721 FANCAO15360 1455 aa11.4□□□□□ -0.58
SMARCE1-212ENST00000577721 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
SMARCE1-212ENST00000577721 SAMD9Q5K651 1589 aa11.4□□□□□ -0.58
SMARCE1-212ENST00000577721 PCF11O94913 1555 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-212ENST00000577721 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
SMARCE1-212ENST00000577721 LMTK3Q96Q04 1460 aa11.38□□□□□ -0.59
SMARCE1-212ENST00000577721 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
SMARCE1-212ENST00000577721 PYGBP11216 843 aa11.38□□□□□ -0.59
SMARCE1-212ENST00000577721 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
SMARCE1-212ENST00000577721 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
SMARCE1-212ENST00000577721 FRMPD1Q5SYB0 1578 aa11.37□□□□□ -0.59
SMARCE1-212ENST00000577721 EEA1Q15075 1411 aa11.37□□□□□ -0.59
SMARCE1-212ENST00000577721 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-212ENST00000577721 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
SMARCE1-212ENST00000577721 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
SMARCE1-212ENST00000577721 SCAPERQ9BY12 1400 aa11.36□□□□□ -0.59
SMARCE1-212ENST00000577721 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
SMARCE1-212ENST00000577721 EFCAB2Q5VUJ9 269 aa11.36□□□□□ -0.59
SMARCE1-212ENST00000577721 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
SMARCE1-212ENST00000577721 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
SMARCE1-212ENST00000577721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCE1-212ENST00000577721 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
SMARCE1-212ENST00000577721 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-212ENST00000577721 ZFYVE16Q7Z3T8 1539 aa11.34□□□□□ -0.59
SMARCE1-212ENST00000577721 RIMS1Q86UR5 1692 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-212ENST00000577721 MAGI2Q86UL8 1455 aa11.33□□□□□ -0.6
SMARCE1-212ENST00000577721 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-212ENST00000577721 PLCH2O75038 1416 aa11.33□□□□□ -0.6
SMARCE1-212ENST00000577721 EFCAB5A4FU69 1503 aa11.32□□□□□ -0.6
SMARCE1-212ENST00000577721 CFAP74Q9C0B2 1584 aa11.32□□□□□ -0.6
SMARCE1-212ENST00000577721 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
SMARCE1-212ENST00000577721 ATP10AO60312 1499 aa11.31□□□□□ -0.6
SMARCE1-212ENST00000577721 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-212ENST00000577721 ESF1Q9H501 851 aaKnown RBP11.3□□□□□ -0.6
SMARCE1-212ENST00000577721 RICTORQ6R327 1708 aa11.29□□□□□ -0.6
SMARCE1-212ENST00000577721 TTC37Q6PGP7 1564 aa11.29□□□□□ -0.6
SMARCE1-212ENST00000577721 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
SMARCE1-212ENST00000577721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.65e-7■■□□□ 13.2
SMARCE1-212ENST00000577721 ZMYM4Q5VZL5 1548 aa11.29□□□□□ -0.6
SMARCE1-212ENST00000577721 C9orf84Q5VXU9 1444 aa11.27□□□□□ -0.6
SMARCE1-212ENST00000577721 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
SMARCE1-212ENST00000577721 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
SMARCE1-212ENST00000577721 ERBB3P21860 1342 aa11.26□□□□□ -0.61
SMARCE1-212ENST00000577721 G3V3G9 751 aa11.25□□□□□ -0.61
SMARCE1-212ENST00000577721 ZNF467Q7Z7K2 595 aaPredicted RBP11.25□□□□□ -0.61
SMARCE1-212ENST00000577721 DISP3Q9P2K9 1392 aa11.24□□□□□ -0.61
SMARCE1-212ENST00000577721 CLIP1P30622 1438 aa11.24□□□□□ -0.61
SMARCE1-212ENST00000577721 UHRF1BP1Q6BDS2 1440 aa11.24□□□□□ -0.61
SMARCE1-212ENST00000577721 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
SMARCE1-212ENST00000577721 ARHGAP5Q13017 1502 aa11.23□□□□□ -0.61
SMARCE1-212ENST00000577721 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
SMARCE1-212ENST00000577721 TROQ12816 1431 aaPredicted RBP11.22□□□□□ -0.61
SMARCE1-212ENST00000577721 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.61
SMARCE1-212ENST00000577721 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-212ENST00000577721 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-212ENST00000577721 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.62
SMARCE1-212ENST00000577721 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
SMARCE1-212ENST00000577721 DOK7Q18PE1 504 aa11.19□□□□□ -0.62
SMARCE1-212ENST00000577721 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
SMARCE1-212ENST00000577721 KIF14Q15058 1648 aa11.18□□□□□ -0.62
SMARCE1-212ENST00000577721 HOXB3P14651 431 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-212ENST00000577721 TRAPPC8Q9Y2L5 1435 aa11.17□□□□□ -0.62
SMARCE1-212ENST00000577721 MYO5CQ9NQX4 1742 aa11.16□□□□□ -0.62
SMARCE1-212ENST00000577721 PREX1Q8TCU6 1659 aa11.15□□□□□ -0.62
SMARCE1-212ENST00000577721 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.62
SMARCE1-212ENST00000577721 SOCS7O14512 581 aa11.15□□□□□ -0.62
SMARCE1-212ENST00000577721 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
SMARCE1-212ENST00000577721 HNRNPMP52272 730 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMARCE1-212ENST00000577721 PTPRTO14522 1441 aa11.15□□□□□ -0.62
SMARCE1-212ENST00000577721 PSEN1P49768 467 aa11.14□□□□□ -0.63
SMARCE1-212ENST00000577721 GSE1Q14687 1217 aa11.14□□□□□ -0.63
SMARCE1-212ENST00000577721 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
SMARCE1-212ENST00000577721 SPAG9O60271 1321 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-212ENST00000577721 NCKAP5LQ9HCH0 1330 aa11.13□□□□□ -0.63
SMARCE1-212ENST00000577721 KDM5CP41229 1560 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms