RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 ATP1B4Q9UN42 357 aaPredicted RBP7.21□□□□□ -1.25
DHX40-204ENST00000577549 MDM2Q00987 491 aaPredicted RBP7.2□□□□□ -1.26
DHX40-204ENST00000577549 MAP3K9P80192 1104 aa7.2□□□□□ -1.26
DHX40-204ENST00000577549 PAK3O75914 559 aaPredicted RBP7.19□□□□□ -1.26
DHX40-204ENST00000577549 SKIV2LQ15477 1246 aaKnown RBP7.19□□□□□ -1.26
DHX40-204ENST00000577549 TMUB1Q9BVT8 246 aa7.19□□□□□ -1.26
DHX40-204ENST00000577549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.19□□□□□ -1.262e-6■■■□□ 14.6
DHX40-204ENST00000577549 ZNF330Q9Y3S2 320 aaPredicted RBP7.19□□□□□ -1.26
DHX40-204ENST00000577549 CARNS1A5YM72 827 aa7.18□□□□□ -1.26
DHX40-204ENST00000577549 FAM161AQ3B820 660 aa7.18□□□□□ -1.26
DHX40-204ENST00000577549 ILDR1Q86SU0 546 aaPredicted RBP7.18□□□□□ -1.26
DHX40-204ENST00000577549 BEGAINQ9BUH8 593 aa7.18□□□□□ -1.26
DHX40-204ENST00000577549 C2orf72A6NCS6 295 aa7.18□□□□□ -1.26
DHX40-204ENST00000577549 SSTR3P32745 418 aaPredicted RBP7.17□□□□□ -1.26
DHX40-204ENST00000577549 MICALL2Q8IY33 904 aa7.17□□□□□ -1.26
DHX40-204ENST00000577549 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.17□□□□□ -1.26
DHX40-204ENST00000577549 CDHR5Q9HBB8 845 aa7.17□□□□□ -1.26
DHX40-204ENST00000577549 TMC2Q8TDI7 906 aa7.17□□□□□ -1.26
DHX40-204ENST00000577549 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
DHX40-204ENST00000577549 POM121CA8CG34 1229 aa7.15□□□□□ -1.26
DHX40-204ENST00000577549 FBXW7Q969H0 707 aa7.15□□□□□ -1.26
DHX40-204ENST00000577549 NPDC1Q9NQX5 325 aaPredicted RBP7.15□□□□□ -1.26
DHX40-204ENST00000577549 ZRANB1Q9UGI0 708 aa7.15□□□□□ -1.26
DHX40-204ENST00000577549 GPCPD1Q9NPB8 672 aa7.14□□□□□ -1.27
DHX40-204ENST00000577549 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
DHX40-204ENST00000577549 SPDYE5A6NIY4 337 aa7.14□□□□□ -1.27
DHX40-204ENST00000577549 MS4A3Q96HJ5 214 aa7.14□□□□□ -1.27
DHX40-204ENST00000577549 NACADO15069 1562 aa7.13□□□□□ -1.27
DHX40-204ENST00000577549 KIF3CO14782 793 aa7.13□□□□□ -1.27
DHX40-204ENST00000577549 CLCN1P35523 988 aa7.13□□□□□ -1.27
DHX40-204ENST00000577549 TBC1D12O60347 775 aa7.12□□□□□ -1.27
DHX40-204ENST00000577549 RFC5P40937 340 aa7.12□□□□□ -1.27
DHX40-204ENST00000577549 PTGER2P43116 358 aa7.12□□□□□ -1.27
DHX40-204ENST00000577549 MTMR14Q8NCE2 650 aa7.12□□□□□ -1.27
DHX40-204ENST00000577549 TTLL13PA6NNM8 815 aa7.11□□□□□ -1.27
DHX40-204ENST00000577549 CALR3Q96L12 384 aaKnown RBP7.1□□□□□ -1.27
DHX40-204ENST00000577549 FAM217BQ9NTX9 383 aaPredicted RBP7.1□□□□□ -1.27
DHX40-204ENST00000577549 GLMNQ92990 594 aa7.1□□□□□ -1.27
DHX40-204ENST00000577549 CECR2Q9BXF3 1484 aa7.09□□□□□ -1.27
DHX40-204ENST00000577549 FXR2P51116 673 aaKnown RBP eCLIP7.09□□□□□ -1.27
DHX40-204ENST00000577549 LIMD1Q9UGP4 676 aa7.09□□□□□ -1.27
DHX40-204ENST00000577549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.09□□□□□ -1.27
DHX40-204ENST00000577549 PPP1R15AO75807 674 aaPredicted RBP7.09□□□□□ -1.27
DHX40-204ENST00000577549 PDCD7Q8N8D1 485 aaKnown RBP7.09□□□□□ -1.27
DHX40-204ENST00000577549 RFX1P22670 979 aa7.08□□□□□ -1.28
DHX40-204ENST00000577549 ABL2P42684 1182 aa7.08□□□□□ -1.28
DHX40-204ENST00000577549 CLK2P49760 499 aaKnown RBP7.08□□□□□ -1.28
DHX40-204ENST00000577549 TSR1Q2NL82 804 aaKnown RBP7.08□□□□□ -1.28
DHX40-204ENST00000577549 TMEM92Q6UXU6 159 aa7.08□□□□□ -1.28
DHX40-204ENST00000577549 EVI5O60447 810 aa7.07□□□□□ -1.28
DHX40-204ENST00000577549 CD44P16070 742 aaKnown RBP7.07□□□□□ -1.28
DHX40-204ENST00000577549 TBC1D2BQ9UPU7 963 aa7.07□□□□□ -1.28
DHX40-204ENST00000577549 TRIM35Q9UPQ4 493 aa7.07□□□□□ -1.28
DHX40-204ENST00000577549 ADAMTS19Q8TE59 1207 aa7.06□□□□□ -1.28
DHX40-204ENST00000577549 TBC1D2Q9BYX2 928 aa7.06□□□□□ -1.28
DHX40-204ENST00000577549 BANK1Q8NDB2 785 aa7.05□□□□□ -1.28
DHX40-204ENST00000577549 RBM33Q96EV2 1170 aaKnown RBP7.05□□□□□ -1.28
DHX40-204ENST00000577549 METTL3Q86U44 580 aaKnown RBP7.05□□□□□ -1.28
DHX40-204ENST00000577549 BMP2KQ9NSY1 1161 aaPredicted RBP7.05□□□□□ -1.28
DHX40-204ENST00000577549 CC2D2AQ9P2K1 1620 aa7.05□□□□□ -1.28
DHX40-204ENST00000577549 E9PSI1 815 aa7.04□□□□□ -1.28
DHX40-204ENST00000577549 ACIN1Q9UKV3 1341 aaKnown RBP7.04□□□□□ -1.28
DHX40-204ENST00000577549 TMEM121BQ9BXQ6 578 aaPredicted RBP7.04□□□□□ -1.28
DHX40-204ENST00000577549 MAP3K7O43318 606 aa7.04□□□□□ -1.28
DHX40-204ENST00000577549 CSPP1Q1MSJ5 1256 aa7.03□□□□□ -1.28
DHX40-204ENST00000577549 MYO15BQ96JP2 1530 aa7.03□□□□□ -1.28
DHX40-204ENST00000577549 EN1Q05925 392 aaPredicted RBP7.02□□□□□ -1.29
DHX40-204ENST00000577549 KCNA1Q09470 495 aa7.02□□□□□ -1.29
DHX40-204ENST00000577549 BRD1O95696 1058 aa7.02□□□□□ -1.29
DHX40-204ENST00000577549 QPCTQ16769 361 aa7.02□□□□□ -1.29
DHX40-204ENST00000577549 BOLA1Q9Y3E2 137 aa7.02□□□□□ -1.29
DHX40-204ENST00000577549 SRPK2P78362 688 aaKnown RBP7.01□□□□□ -1.29
DHX40-204ENST00000577549 PIP4P2Q8N4L2 257 aa7.01□□□□□ -1.29
DHX40-204ENST00000577549 CFAP70Q5T0N1 1121 aa7.01□□□□□ -1.29
DHX40-204ENST00000577549 HDGFL1Q5TGJ6 251 aa7□□□□□ -1.29
DHX40-204ENST00000577549 PBXIP1Q96AQ6 731 aa7□□□□□ -1.29
DHX40-204ENST00000577549 IVNS1ABPQ9Y6Y0 642 aa7□□□□□ -1.29
DHX40-204ENST00000577549 UNC13AQ9UPW8 1703 aa7□□□□□ -1.29
DHX40-204ENST00000577549 TIE1P35590 1138 aa7□□□□□ -1.29
DHX40-204ENST00000577549 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
DHX40-204ENST00000577549 ERCC6L2Q5T890 1561 aa6.99□□□□□ -1.29
DHX40-204ENST00000577549 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
DHX40-204ENST00000577549 PATL2C9JE40 543 aaKnown RBP6.99□□□□□ -1.29
DHX40-204ENST00000577549 PXYLP1Q8TE99 480 aa6.99□□□□□ -1.29
DHX40-204ENST00000577549 PDE4CQ08493 712 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 TMEM259Q4ZIN3 620 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 AMOTL2Q9Y2J4 779 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 PADI6Q6TGC4 694 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 RIC3Q7Z5B4 369 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 USTQ9Y2C2 406 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 PCDHGA10Q9Y5H3 936 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 BICRAQ9NZM4 1560 aa6.98□□□□□ -1.29
DHX40-204ENST00000577549 CCDC27Q2M243 656 aa6.97□□□□□ -1.29
DHX40-204ENST00000577549 SPIRE2Q8WWL2 714 aa6.97□□□□□ -1.29
DHX40-204ENST00000577549 AP1G2O75843 785 aa6.97□□□□□ -1.29
DHX40-204ENST00000577549 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
DHX40-204ENST00000577549 PCDHB15Q9Y5E8 787 aa6.97□□□□□ -1.29
DHX40-204ENST00000577549 ADGRG1Q9Y653 693 aa6.97□□□□□ -1.29
DHX40-204ENST00000577549 GPR37L1O60883 481 aa6.96□□□□□ -1.3
DHX40-204ENST00000577549 RTL5Q5HYW3 569 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms