RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
TOP2A-202ENST00000577541 PCDHGA10Q9Y5H3 936 aa9.84□□□□□ -0.83
TOP2A-202ENST00000577541 KIAA1468Q9P260 1216 aa9.83□□□□□ -0.84
TOP2A-202ENST00000577541 ZNF775Q96BV0 537 aaPredicted RBP9.82□□□□□ -0.84
TOP2A-202ENST00000577541 PRKD2Q9BZL6 878 aa9.82□□□□□ -0.84
TOP2A-202ENST00000577541 TSR3Q9UJK0 312 aaKnown RBP9.81□□□□□ -0.84
TOP2A-202ENST00000577541 SEPT9Q9UHD8 586 aaPredicted RBP9.8□□□□□ -0.84
TOP2A-202ENST00000577541 ONECUT3O60422 494 aaPredicted RBP9.79□□□□□ -0.84
TOP2A-202ENST00000577541 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
TOP2A-202ENST00000577541 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
TOP2A-202ENST00000577541 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
TOP2A-202ENST00000577541 PDE4AP27815 886 aa9.77□□□□□ -0.85
TOP2A-202ENST00000577541 FBXW7Q969H0 707 aa9.77□□□□□ -0.85
TOP2A-202ENST00000577541 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.77□□□□□ -0.85
TOP2A-202ENST00000577541 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
TOP2A-202ENST00000577541 LRCH3Q96II8 777 aa9.76□□□□□ -0.85
TOP2A-202ENST00000577541 V9GY48 417 aaPredicted RBP9.76□□□□□ -0.85
TOP2A-202ENST00000577541 FAM98CQ17RN3 349 aaKnown RBP9.75□□□□□ -0.85
TOP2A-202ENST00000577541 EMILIN3Q9NT22 766 aa9.75□□□□□ -0.85
TOP2A-202ENST00000577541 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
TOP2A-202ENST00000577541 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
TOP2A-202ENST00000577541 PDZRN3Q9UPQ7 1066 aa9.72□□□□□ -0.85
TOP2A-202ENST00000577541 PHF14O94880 888 aa9.71□□□□□ -0.86
TOP2A-202ENST00000577541 PPP1R18Q6NYC8 613 aa9.71□□□□□ -0.86
TOP2A-202ENST00000577541 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
TOP2A-202ENST00000577541 PPP4CP60510 307 aa9.69□□□□□ -0.86
TOP2A-202ENST00000577541 C6orf132Q5T0Z8 1188 aa9.68□□□□□ -0.86
TOP2A-202ENST00000577541 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
TOP2A-202ENST00000577541 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
TOP2A-202ENST00000577541 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
TOP2A-202ENST00000577541 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
TOP2A-202ENST00000577541 IL21Q9HBE4 155 aa9.65□□□□□ -0.86
TOP2A-202ENST00000577541 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
TOP2A-202ENST00000577541 DNAJC5Q9H3Z4 198 aa9.64□□□□□ -0.87
TOP2A-202ENST00000577541 MFSD10Q14728 455 aa9.63□□□□□ -0.87
TOP2A-202ENST00000577541 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
TOP2A-202ENST00000577541 MTRQ99707 1265 aa9.63□□□□□ -0.87
TOP2A-202ENST00000577541 EPAS1Q99814 870 aa9.63□□□□□ -0.87
TOP2A-202ENST00000577541 TSKSQ9UJT2 592 aa9.61□□□□□ -0.87
TOP2A-202ENST00000577541 PACS2Q86VP3 889 aa9.6□□□□□ -0.87
TOP2A-202ENST00000577541 POTECB2RU33 542 aa9.59□□□□□ -0.87
TOP2A-202ENST00000577541 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
TOP2A-202ENST00000577541 RBM33Q96EV2 1170 aaKnown RBP9.58□□□□□ -0.88
TOP2A-202ENST00000577541 C3orf80F5H4A9 247 aa9.57□□□□□ -0.88
TOP2A-202ENST00000577541 TRIM67Q6ZTA4 783 aa9.56□□□□□ -0.88
TOP2A-202ENST00000577541 SAMD7Q7Z3H4 446 aa9.56□□□□□ -0.88
TOP2A-202ENST00000577541 SMAPO00193 183 aa9.55□□□□□ -0.88
TOP2A-202ENST00000577541 GGCXP38435 758 aa9.54□□□□□ -0.88
TOP2A-202ENST00000577541 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
TOP2A-202ENST00000577541 MYT1Q01538 1121 aa9.53□□□□□ -0.88
TOP2A-202ENST00000577541 PKDCCQ504Y2 493 aa9.53□□□□□ -0.88
TOP2A-202ENST00000577541 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
TOP2A-202ENST00000577541 TSR1Q2NL82 804 aaKnown RBP9.52□□□□□ -0.89
TOP2A-202ENST00000577541 LCE2AQ5TA79 106 aaPredicted RBP9.52□□□□□ -0.89
TOP2A-202ENST00000577541 TREML4Q6UXN2 200 aa9.52□□□□□ -0.89
TOP2A-202ENST00000577541 EMID1Q96A84 441 aaPredicted RBP9.51□□□□□ -0.89
TOP2A-202ENST00000577541 DGAT1O75907 488 aa9.5□□□□□ -0.89
TOP2A-202ENST00000577541 CADPS2Q86UW7 1296 aa9.5□□□□□ -0.89
TOP2A-202ENST00000577541 DDX12PQ92771 950 aa9.5□□□□□ -0.89
TOP2A-202ENST00000577541 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
TOP2A-202ENST00000577541 APLP1P51693 650 aa9.49□□□□□ -0.89
TOP2A-202ENST00000577541 DPYSL4O14531 572 aa9.48□□□□□ -0.89
TOP2A-202ENST00000577541 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
TOP2A-202ENST00000577541 SLC19A1P41440 591 aa9.44□□□□□ -0.9
TOP2A-202ENST00000577541 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
TOP2A-202ENST00000577541 EN1Q05925 392 aaPredicted RBP9.44□□□□□ -0.9
TOP2A-202ENST00000577541 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
TOP2A-202ENST00000577541 MAP3K7O43318 606 aa9.43□□□□□ -0.9
TOP2A-202ENST00000577541 RNF40O75150 1001 aa9.43□□□□□ -0.9
TOP2A-202ENST00000577541 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
TOP2A-202ENST00000577541 PRSS12P56730 875 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 COPS2P61201 443 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 PRR20EP86478 221 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 PRR20CP86479 221 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 PRR20DP86480 221 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 PRR20BP86481 221 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 PRR20AP86496 221 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 TATDN2Q93075 761 aa9.42□□□□□ -0.9
TOP2A-202ENST00000577541 NBR1Q14596 966 aa9.4□□□□□ -0.9
TOP2A-202ENST00000577541 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
TOP2A-202ENST00000577541 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
TOP2A-202ENST00000577541 SPRYD7Q5W111 196 aa9.39□□□□□ -0.91
TOP2A-202ENST00000577541 ZNF598Q86UK7 904 aaKnown RBP9.39□□□□□ -0.91
TOP2A-202ENST00000577541 NECTIN2Q92692 538 aa9.39□□□□□ -0.91
TOP2A-202ENST00000577541 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
TOP2A-202ENST00000577541 RNF223E7ERA6 249 aa9.38□□□□□ -0.91
TOP2A-202ENST00000577541 ZPR1O75312 459 aa9.38□□□□□ -0.91
TOP2A-202ENST00000577541 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
TOP2A-202ENST00000577541 CERKQ8TCT0 537 aa9.37□□□□□ -0.91
TOP2A-202ENST00000577541 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
TOP2A-202ENST00000577541 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
TOP2A-202ENST00000577541 NUDT18Q6ZVK8 323 aa9.34□□□□□ -0.91
TOP2A-202ENST00000577541 WFS1O76024 890 aa9.33□□□□□ -0.92
TOP2A-202ENST00000577541 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
TOP2A-202ENST00000577541 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
TOP2A-202ENST00000577541 TNFRSF10AO00220 468 aa9.31□□□□□ -0.92
TOP2A-202ENST00000577541 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
TOP2A-202ENST00000577541 GDF9O60383 454 aa9.31□□□□□ -0.92
TOP2A-202ENST00000577541 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
TOP2A-202ENST00000577541 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms