RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 MAGI2Q86UL8 1455 aa19.45■□□□□ 0.7
RAB40B-211ENST00000576359 BCANQ96GW7 911 aa19.45■□□□□ 0.7
RAB40B-211ENST00000576359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.7
RAB40B-211ENST00000576359 DCAF11Q8TEB1 546 aa19.44■□□□□ 0.7
RAB40B-211ENST00000576359 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
RAB40B-211ENST00000576359 CCDC144AA2RUR9 1427 aa19.43■□□□□ 0.7
RAB40B-211ENST00000576359 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
RAB40B-211ENST00000576359 DHX29Q7Z478 1369 aaKnown RBP19.42■□□□□ 0.7
RAB40B-211ENST00000576359 NEFLP07196 543 aa19.42■□□□□ 0.7
RAB40B-211ENST00000576359 CARD11Q9BXL7 1154 aa19.42■□□□□ 0.7
RAB40B-211ENST00000576359 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
RAB40B-211ENST00000576359 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.7
RAB40B-211ENST00000576359 TRPM1Q7Z4N2 1603 aa19.39■□□□□ 0.69
RAB40B-211ENST00000576359 PRAG1Q86YV5 1406 aa19.38■□□□□ 0.69
RAB40B-211ENST00000576359 ARID4BQ4LE39 1312 aaPredicted RBP19.37■□□□□ 0.69
RAB40B-211ENST00000576359 A2MP01023 1474 aa19.37■□□□□ 0.69
RAB40B-211ENST00000576359 ZFYVE16Q7Z3T8 1539 aa19.37■□□□□ 0.69
RAB40B-211ENST00000576359 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
RAB40B-211ENST00000576359 ABCA9Q8IUA7 1624 aa19.35■□□□□ 0.69
RAB40B-211ENST00000576359 ATP10AO60312 1499 aa19.35■□□□□ 0.69
RAB40B-211ENST00000576359 ROCK2O75116 1388 aaKnown RBP19.35■□□□□ 0.69
RAB40B-211ENST00000576359 ST20-MTHFSA0A0A6YYL1 179 aa19.35■□□□□ 0.69
RAB40B-211ENST00000576359 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
RAB40B-211ENST00000576359 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
RAB40B-211ENST00000576359 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
RAB40B-211ENST00000576359 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
RAB40B-211ENST00000576359 TSHZ2Q9NRE2 1034 aa19.33■□□□□ 0.68
RAB40B-211ENST00000576359 SPAG9O60271 1321 aaKnown RBP19.33■□□□□ 0.68
RAB40B-211ENST00000576359 FANCAO15360 1455 aa19.31■□□□□ 0.68
RAB40B-211ENST00000576359 FAM9BQ8IZU0 186 aa19.31■□□□□ 0.68
RAB40B-211ENST00000576359 E9PCH4 1651 aa19.3■□□□□ 0.68
RAB40B-211ENST00000576359 INO80Q9ULG1 1556 aaPredicted RBP19.3■□□□□ 0.68
RAB40B-211ENST00000576359 NBPF1Q3BBV0 1214 aa19.29■□□□□ 0.68
RAB40B-211ENST00000576359 DEPDC5O75140 1603 aa19.28■□□□□ 0.68
RAB40B-211ENST00000576359 GPRASP1Q5JY77 1395 aa19.28■□□□□ 0.68
RAB40B-211ENST00000576359 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
RAB40B-211ENST00000576359 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
RAB40B-211ENST00000576359 LAMC1P11047 1609 aa19.27■□□□□ 0.68
RAB40B-211ENST00000576359 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
RAB40B-211ENST00000576359 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
RAB40B-211ENST00000576359 EIF2AK4Q9P2K8 1649 aaKnown RBP19.24■□□□□ 0.67
RAB40B-211ENST00000576359 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
RAB40B-211ENST00000576359 SCAPERQ9BY12 1400 aa19.22■□□□□ 0.67
RAB40B-211ENST00000576359 TRPM2O94759 1503 aa19.22■□□□□ 0.67
RAB40B-211ENST00000576359 SPHKAPQ2M3C7 1700 aa19.22■□□□□ 0.67
RAB40B-211ENST00000576359 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
RAB40B-211ENST00000576359 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
RAB40B-211ENST00000576359 RNF17Q9BXT8 1623 aaKnown RBP19.21■□□□□ 0.67
RAB40B-211ENST00000576359 TET3O43151 1660 aa19.2■□□□□ 0.66
RAB40B-211ENST00000576359 PTPRTO14522 1441 aa19.2■□□□□ 0.66
RAB40B-211ENST00000576359 CLTCL1P53675 1640 aa19.19■□□□□ 0.66
RAB40B-211ENST00000576359 CEP152O94986 1710 aa19.19■□□□□ 0.66
RAB40B-211ENST00000576359 MROH1Q8NDA8 1641 aa19.18■□□□□ 0.66
RAB40B-211ENST00000576359 COL17A1Q9UMD9 1497 aaPredicted RBP19.18■□□□□ 0.66
RAB40B-211ENST00000576359 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
RAB40B-211ENST00000576359 TESK2Q96S53 571 aa19.17■□□□□ 0.66
RAB40B-211ENST00000576359 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
RAB40B-211ENST00000576359 OSCARQ8IYS5 282 aa19.16■□□□□ 0.66
RAB40B-211ENST00000576359 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
RAB40B-211ENST00000576359 DISP3Q9P2K9 1392 aa19.16■□□□□ 0.66
RAB40B-211ENST00000576359 KIF3BO15066 747 aa19.14■□□□□ 0.65
RAB40B-211ENST00000576359 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
RAB40B-211ENST00000576359 KANK1Q14678 1352 aa19.12■□□□□ 0.65
RAB40B-211ENST00000576359 PNISRQ8TF01 805 aaKnown RBP19.12■□□□□ 0.65
RAB40B-211ENST00000576359 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
RAB40B-211ENST00000576359 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
RAB40B-211ENST00000576359 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
RAB40B-211ENST00000576359 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
RAB40B-211ENST00000576359 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
RAB40B-211ENST00000576359 RALBP1Q15311 655 aa19.09■□□□□ 0.65
RAB40B-211ENST00000576359 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
RAB40B-211ENST00000576359 BRD4O60885 1362 aaPredicted RBP19.08■□□□□ 0.64
RAB40B-211ENST00000576359 UGGT1Q9NYU2 1555 aa19.08■□□□□ 0.64
RAB40B-211ENST00000576359 NPM1P06748 294 aaKnown RBP eCLIP19.08■□□□□ 0.64
RAB40B-211ENST00000576359 PARD3Q8TEW0 1356 aa19.07■□□□□ 0.64
RAB40B-211ENST00000576359 EFCAB6Q5THR3 1501 aa19.07■□□□□ 0.64
RAB40B-211ENST00000576359 LRPPRCP42704 1394 aaKnown RBP19.07■□□□□ 0.64
RAB40B-211ENST00000576359 CD109Q6YHK3 1445 aa19.07■□□□□ 0.64
RAB40B-211ENST00000576359 PPRC1Q5VV67 1664 aaKnown RBP19.06■□□□□ 0.64
RAB40B-211ENST00000576359 ERICH6BQ5W0A0 696 aa19.06■□□□□ 0.64
RAB40B-211ENST00000576359 NEURL4Q96JN8 1562 aa19.05■□□□□ 0.64
RAB40B-211ENST00000576359 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
RAB40B-211ENST00000576359 TMF1P82094 1093 aa19.05■□□□□ 0.64
RAB40B-211ENST00000576359 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
RAB40B-211ENST00000576359 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
RAB40B-211ENST00000576359 FRMPD1Q5SYB0 1578 aa19.03■□□□□ 0.64
RAB40B-211ENST00000576359 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
RAB40B-211ENST00000576359 LMTK2Q8IWU2 1503 aa19.02■□□□□ 0.64
RAB40B-211ENST00000576359 STAC3Q96MF2 364 aa19.02■□□□□ 0.63
RAB40B-211ENST00000576359 PANK3Q9H999 370 aa19.02■□□□□ 0.63
RAB40B-211ENST00000576359 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
RAB40B-211ENST00000576359 MROH2AA6NES4 1674 aa19.01■□□□□ 0.63
RAB40B-211ENST00000576359 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
RAB40B-211ENST00000576359 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
RAB40B-211ENST00000576359 RBM19Q9Y4C8 960 aaKnown RBP19■□□□□ 0.63
RAB40B-211ENST00000576359 MLH3Q9UHC1 1453 aa19■□□□□ 0.63
RAB40B-211ENST00000576359 HECW2Q9P2P5 1572 aa19■□□□□ 0.63
RAB40B-211ENST00000576359 KIF1BO60333 1816 aa19■□□□□ 0.63
RAB40B-211ENST00000576359 NLRP13Q86W25 1043 aa19■□□□□ 0.63
RAB40B-211ENST00000576359 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms