RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
SCARF1-209ENST00000576012 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
SCARF1-209ENST00000576012 NBPF1Q3BBV0 1214 aa18.96■□□□□ 0.63
SCARF1-209ENST00000576012 SAMD9Q5K651 1589 aa18.96■□□□□ 0.63
SCARF1-209ENST00000576012 LRRIQ1Q96JM4 1722 aa18.96■□□□□ 0.63
SCARF1-209ENST00000576012 LRPPRCP42704 1394 aaKnown RBP18.96■□□□□ 0.63
SCARF1-209ENST00000576012 DAPK1P53355 1430 aa18.96■□□□□ 0.63
SCARF1-209ENST00000576012 MIA2Q96PC5 1412 aa18.95■□□□□ 0.62
SCARF1-209ENST00000576012 KTN1Q86UP2 1357 aaKnown RBP18.95■□□□□ 0.62
SCARF1-209ENST00000576012 ABCC5O15440 1437 aa18.95■□□□□ 0.62
SCARF1-209ENST00000576012 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
SCARF1-209ENST00000576012 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
SCARF1-209ENST00000576012 GZF1Q9H116 711 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-209ENST00000576012 C8orf34Q49A92 452 aa18.93■□□□□ 0.62
SCARF1-209ENST00000576012 CCDC146Q8IYE0 955 aa18.93■□□□□ 0.62
SCARF1-209ENST00000576012 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
SCARF1-209ENST00000576012 PANK3Q9H999 370 aa18.93■□□□□ 0.62
SCARF1-209ENST00000576012 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
SCARF1-209ENST00000576012 NUP155O75694 1391 aa18.93■□□□□ 0.62
SCARF1-209ENST00000576012 PDE3BQ13370 1112 aa18.92■□□□□ 0.62
SCARF1-209ENST00000576012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.92■□□□□ 0.62
SCARF1-209ENST00000576012 PKNOX2Q96KN3 472 aa18.91■□□□□ 0.62
SCARF1-209ENST00000576012 EPRSP07814 1512 aaKnown RBP18.89■□□□□ 0.62
SCARF1-209ENST00000576012 CEP170Q5SW79 1584 aa18.89■□□□□ 0.61
SCARF1-209ENST00000576012 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-209ENST00000576012 TCOF1Q13428 1488 aaKnown RBP18.88■□□□□ 0.61
SCARF1-209ENST00000576012 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-209ENST00000576012 SEC24BO95487 1268 aa18.87■□□□□ 0.61
SCARF1-209ENST00000576012 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCARF1-209ENST00000576012 BCAR3O75815 825 aa18.85■□□□□ 0.61
SCARF1-209ENST00000576012 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
SCARF1-209ENST00000576012 PZPP20742 1482 aa18.85■□□□□ 0.61
SCARF1-209ENST00000576012 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
SCARF1-209ENST00000576012 RRAGDQ9NQL2 400 aaPredicted RBP18.84■□□□□ 0.61
SCARF1-209ENST00000576012 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
SCARF1-209ENST00000576012 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
SCARF1-209ENST00000576012 KDM2BQ8NHM5 1336 aa18.82■□□□□ 0.6
SCARF1-209ENST00000576012 CANXP27824 592 aaKnown RBP18.82■□□□□ 0.6
SCARF1-209ENST00000576012 DISP1Q96F81 1524 aa18.81■□□□□ 0.6
SCARF1-209ENST00000576012 PER1O15534 1290 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-209ENST00000576012 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
SCARF1-209ENST00000576012 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
SCARF1-209ENST00000576012 NUP160Q12769 1436 aa18.81■□□□□ 0.6
SCARF1-209ENST00000576012 KIAA0556O60303 1618 aa18.8■□□□□ 0.6
SCARF1-209ENST00000576012 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
SCARF1-209ENST00000576012 IGHDP01880 384 aa18.8■□□□□ 0.6
SCARF1-209ENST00000576012 FAM43AQ8N2R8 423 aa18.8■□□□□ 0.6
SCARF1-209ENST00000576012 PRG4Q92954 1404 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-209ENST00000576012 DUSP27Q5VZP5 1158 aa18.79■□□□□ 0.6
SCARF1-209ENST00000576012 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-209ENST00000576012 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
SCARF1-209ENST00000576012 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
SCARF1-209ENST00000576012 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.6
SCARF1-209ENST00000576012 COG6Q9Y2V7 657 aa18.77■□□□□ 0.6
SCARF1-209ENST00000576012 PLEKHH1Q9ULM0 1364 aa18.77■□□□□ 0.6
SCARF1-209ENST00000576012 CARMIL2Q6F5E8 1435 aa18.76■□□□□ 0.59
SCARF1-209ENST00000576012 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
SCARF1-209ENST00000576012 PANK1Q8TE04 598 aa18.76■□□□□ 0.59
SCARF1-209ENST00000576012 PARD3Q8TEW0 1356 aa18.76■□□□□ 0.59
SCARF1-209ENST00000576012 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
SCARF1-209ENST00000576012 APAF1O14727 1248 aa18.75■□□□□ 0.59
SCARF1-209ENST00000576012 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
SCARF1-209ENST00000576012 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
SCARF1-209ENST00000576012 KDM5CP41229 1560 aa18.75■□□□□ 0.59
SCARF1-209ENST00000576012 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
SCARF1-209ENST00000576012 VSIG10Q8N0Z9 540 aa18.75■□□□□ 0.59
SCARF1-209ENST00000576012 CHD1O14646 1710 aa18.74■□□□□ 0.59
SCARF1-209ENST00000576012 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
SCARF1-209ENST00000576012 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
SCARF1-209ENST00000576012 BCL2L13Q9BXK5 485 aa18.73■□□□□ 0.59
SCARF1-209ENST00000576012 PLB1Q6P1J6 1458 aa18.72■□□□□ 0.59
SCARF1-209ENST00000576012 ANKRD30AQ9BXX3 1397 aa18.71■□□□□ 0.59
SCARF1-209ENST00000576012 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
SCARF1-209ENST00000576012 CLUAP1Q96AJ1 413 aa18.71■□□□□ 0.59
SCARF1-209ENST00000576012 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
SCARF1-209ENST00000576012 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
SCARF1-209ENST00000576012 BECN1Q14457 450 aa18.69■□□□□ 0.58
SCARF1-209ENST00000576012 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
SCARF1-209ENST00000576012 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
SCARF1-209ENST00000576012 RALGAPBQ86X10 1494 aa18.68■□□□□ 0.58
SCARF1-209ENST00000576012 TMF1P82094 1093 aa18.68■□□□□ 0.58
SCARF1-209ENST00000576012 PLEKHD1A6NEE1 506 aa18.67■□□□□ 0.58
SCARF1-209ENST00000576012 USP19O94966 1318 aa18.67■□□□□ 0.58
SCARF1-209ENST00000576012 PNNQ9H307 717 aaKnown RBP18.67■□□□□ 0.58
SCARF1-209ENST00000576012 TNNQ9UQP3 1299 aa18.67■□□□□ 0.58
SCARF1-209ENST00000576012 XRCC6P12956 609 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCARF1-209ENST00000576012 TESK2Q96S53 571 aa18.65■□□□□ 0.58
SCARF1-209ENST00000576012 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
SCARF1-209ENST00000576012 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
SCARF1-209ENST00000576012 NUP153P49790 1475 aaKnown RBP18.64■□□□□ 0.58
SCARF1-209ENST00000576012 POLR1AO95602 1720 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-209ENST00000576012 SLFN5Q08AF3 891 aa18.64■□□□□ 0.57
SCARF1-209ENST00000576012 GOLGA6L3A6NEY3 463 aa18.64■□□□□ 0.57
SCARF1-209ENST00000576012 UPF2Q9HAU5 1272 aaKnown RBP18.63■□□□□ 0.57
SCARF1-209ENST00000576012 KIF14Q15058 1648 aa18.63■□□□□ 0.57
SCARF1-209ENST00000576012 L1TD1Q5T7N2 865 aaKnown RBP18.61■□□□□ 0.57
SCARF1-209ENST00000576012 TBC1D2Q9BYX2 928 aa18.61■□□□□ 0.57
SCARF1-209ENST00000576012 DNMT1P26358 1616 aaKnown RBP18.61■□□□□ 0.57
SCARF1-209ENST00000576012 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
SCARF1-209ENST00000576012 PTPRGP23470 1445 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms