RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 DMTNQ08495 405 aa10.34□□□□□ -0.75
TOM1L1-220ENST00000575333 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
TOM1L1-220ENST00000575333 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
TOM1L1-220ENST00000575333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.33□□□□□ -0.76
TOM1L1-220ENST00000575333 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
TOM1L1-220ENST00000575333 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
TOM1L1-220ENST00000575333 URB2Q14146 1524 aaKnown RBP10.33□□□□□ -0.76
TOM1L1-220ENST00000575333 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
TOM1L1-220ENST00000575333 WDR62O43379 1518 aa10.32□□□□□ -0.76
TOM1L1-220ENST00000575333 TULP1O00294 542 aaPredicted RBP10.32□□□□□ -0.76
TOM1L1-220ENST00000575333 STK25O00506 426 aa10.32□□□□□ -0.76
TOM1L1-220ENST00000575333 IFNL1Q8IU54 200 aa10.32□□□□□ -0.76
TOM1L1-220ENST00000575333 PDE4AP27815 886 aa10.31□□□□□ -0.76
TOM1L1-220ENST00000575333 ZNF467Q7Z7K2 595 aaPredicted RBP10.31□□□□□ -0.76
TOM1L1-220ENST00000575333 TMEM51Q9NW97 253 aa10.31□□□□□ -0.76
TOM1L1-220ENST00000575333 ISY1Q9ULR0 285 aaKnown RBP10.31□□□□□ -0.76
TOM1L1-220ENST00000575333 HAX1O00165 279 aa10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 EVX2Q03828 476 aa10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 TRIM44Q96DX7 344 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 SMG6Q86US8 1419 aaKnown RBP10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 LETM1O95202 739 aaPredicted RBP10.3□□□□□ -0.76
TOM1L1-220ENST00000575333 GOLGA6L3A6NEY3 463 aa10.29□□□□□ -0.76
TOM1L1-220ENST00000575333 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
TOM1L1-220ENST00000575333 ZNF579Q8NAF0 562 aaKnown RBP10.29□□□□□ -0.76
TOM1L1-220ENST00000575333 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
TOM1L1-220ENST00000575333 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
TOM1L1-220ENST00000575333 ESPNB1AK53 854 aa10.28□□□□□ -0.76
TOM1L1-220ENST00000575333 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
TOM1L1-220ENST00000575333 ABCC8Q09428 1581 aa10.28□□□□□ -0.76
TOM1L1-220ENST00000575333 SGIP1Q9BQI5 828 aa10.27□□□□□ -0.77
TOM1L1-220ENST00000575333 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
TOM1L1-220ENST00000575333 CDK11BP21127 795 aaKnown RBP10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 CUX1P39880 1505 aa10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 IRX3P78415 501 aaPredicted RBP10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 SLC20A2Q08357 652 aa10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 NKX1-1Q15270 411 aaPredicted RBP10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.26□□□□□ -0.77
TOM1L1-220ENST00000575333 CFAP44Q96MT7 982 aa10.25□□□□□ -0.77
TOM1L1-220ENST00000575333 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
TOM1L1-220ENST00000575333 GOLGA3Q08378 1498 aa10.24□□□□□ -0.77
TOM1L1-220ENST00000575333 FSD2A1L4K1 749 aa10.24□□□□□ -0.77
TOM1L1-220ENST00000575333 PSEN1P49768 467 aa10.24□□□□□ -0.77
TOM1L1-220ENST00000575333 WDR97A6NE52 1622 aa10.24□□□□□ -0.77
TOM1L1-220ENST00000575333 CLGNO14967 610 aa10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 FRAT2O75474 233 aaPredicted RBP10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 POTEHQ6S545 545 aa10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 ZNF830Q96NB3 372 aaPredicted RBP10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 ZHX1Q9UKY1 873 aaPredicted RBP10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 PTMSP20962 102 aa10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 MRE11P49959 708 aa10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 AXDND1Q5T1B0 1012 aaPredicted RBP10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 MS4A3Q96HJ5 214 aa10.23□□□□□ -0.77
TOM1L1-220ENST00000575333 KIAA1211Q6ZU35 1233 aa10.22□□□□□ -0.77
TOM1L1-220ENST00000575333 SYNJ1O43426 1573 aa10.21□□□□□ -0.77
TOM1L1-220ENST00000575333 HAP1P54257 671 aaPredicted RBP10.21□□□□□ -0.77
TOM1L1-220ENST00000575333 ARID3AQ99856 593 aa10.21□□□□□ -0.77
TOM1L1-220ENST00000575333 DNAJC5Q9H3Z4 198 aa10.21□□□□□ -0.77
TOM1L1-220ENST00000575333 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
TOM1L1-220ENST00000575333 MAPKBP1O60336 1514 aa10.21□□□□□ -0.77
TOM1L1-220ENST00000575333 MMP14P50281 582 aa10.21□□□□□ -0.78
TOM1L1-220ENST00000575333 POLA1P09884 1462 aaPredicted RBP10.21□□□□□ -0.78
TOM1L1-220ENST00000575333 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.78
TOM1L1-220ENST00000575333 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
TOM1L1-220ENST00000575333 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
TOM1L1-220ENST00000575333 PHLDB1Q86UU1 1377 aa10.2□□□□□ -0.78
TOM1L1-220ENST00000575333 OFD1O75665 1012 aa10.19□□□□□ -0.78
TOM1L1-220ENST00000575333 XRCC6P12956 609 aaKnown RBP eCLIP10.19□□□□□ -0.78
TOM1L1-220ENST00000575333 TOP2BQ02880 1626 aa10.19□□□□□ -0.78
TOM1L1-220ENST00000575333 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
TOM1L1-220ENST00000575333 DYNC1I1O14576 645 aa10.19□□□□□ -0.78
TOM1L1-220ENST00000575333 CCDC94Q9BW85 323 aaPredicted RBP10.19□□□□□ -0.78
TOM1L1-220ENST00000575333 RRBP1Q9P2E9 1410 aaKnown RBP10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 IFT140Q96RY7 1462 aa10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 RAD54L2Q9Y4B4 1467 aa10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 PTMAP06454 111 aaKnown RBP10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 ZSCAN20P17040 1043 aaPredicted RBP10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 DNTTIP2Q5QJE6 756 aaKnown RBP10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 ZNF622Q969S3 477 aaKnown RBP eCLIP10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 MYH16Q9H6N6 1097 aa10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 NUDCQ9Y266 331 aa10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 SOGA1O94964 1423 aa10.18□□□□□ -0.78
TOM1L1-220ENST00000575333 GALR2O43603 387 aaPredicted RBP10.17□□□□□ -0.78
TOM1L1-220ENST00000575333 DNAJC2Q99543 621 aaKnown RBP10.17□□□□□ -0.78
TOM1L1-220ENST00000575333 POGKQ9P215 609 aa10.17□□□□□ -0.78
TOM1L1-220ENST00000575333 TARBP1Q13395 1621 aaKnown RBP10.16□□□□□ -0.78
TOM1L1-220ENST00000575333 RIPK4P57078 832 aa10.16□□□□□ -0.78
TOM1L1-220ENST00000575333 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.79
TOM1L1-220ENST00000575333 CLIP1P30622 1438 aa10.15□□□□□ -0.79
TOM1L1-220ENST00000575333 GTPBP6O43824 516 aaPredicted RBP10.14□□□□□ -0.79
TOM1L1-220ENST00000575333 YY1AP1Q9H869 796 aa10.14□□□□□ -0.79
TOM1L1-220ENST00000575333 CABP2Q9NPB3 220 aa10.14□□□□□ -0.79
TOM1L1-220ENST00000575333 TSPYL1Q9H0U9 437 aa10.13□□□□□ -0.79
TOM1L1-220ENST00000575333 FAM13BQ9NYF5 915 aa10.13□□□□□ -0.79
TOM1L1-220ENST00000575333 CNPY4Q8N129 248 aa10.12□□□□□ -0.79
TOM1L1-220ENST00000575333 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
TOM1L1-220ENST00000575333 NCOA2Q15596 1464 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms