RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PKD2Q13563 968 aa16.63■□□□□ 0.25
TVP23B-208ENST00000575261 NCKAP5LQ9HCH0 1330 aa16.63■□□□□ 0.25
TVP23B-208ENST00000575261 DNMT1P26358 1616 aaKnown RBP16.63■□□□□ 0.25
TVP23B-208ENST00000575261 KIF3BO15066 747 aa16.62■□□□□ 0.25
TVP23B-208ENST00000575261 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
TVP23B-208ENST00000575261 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
TVP23B-208ENST00000575261 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
TVP23B-208ENST00000575261 TNRQ92752 1358 aa16.6■□□□□ 0.25
TVP23B-208ENST00000575261 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
TVP23B-208ENST00000575261 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
TVP23B-208ENST00000575261 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
TVP23B-208ENST00000575261 ZNF335Q9H4Z2 1342 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-208ENST00000575261 ZC3H13Q5T200 1668 aaKnown RBP16.57■□□□□ 0.24
TVP23B-208ENST00000575261 EIF2AK4Q9P2K8 1649 aaKnown RBP16.57■□□□□ 0.24
TVP23B-208ENST00000575261 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
TVP23B-208ENST00000575261 NLRP1Q9C000 1473 aa16.55■□□□□ 0.24
TVP23B-208ENST00000575261 MYOM3Q5VTT5 1437 aa16.55■□□□□ 0.24
TVP23B-208ENST00000575261 MIA2Q96PC5 1412 aa16.55■□□□□ 0.24
TVP23B-208ENST00000575261 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
TVP23B-208ENST00000575261 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
TVP23B-208ENST00000575261 SPATA31D1Q6ZQQ2 1576 aa16.54■□□□□ 0.24
TVP23B-208ENST00000575261 DISP3Q9P2K9 1392 aa16.53■□□□□ 0.24
TVP23B-208ENST00000575261 LOC105371045A0A1W2PR82 267 aa16.53■□□□□ 0.24
TVP23B-208ENST00000575261 ABCC3O15438 1527 aa16.53■□□□□ 0.24
TVP23B-208ENST00000575261 UGGT1Q9NYU2 1555 aa16.52■□□□□ 0.24
TVP23B-208ENST00000575261 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
TVP23B-208ENST00000575261 MROH1Q8NDA8 1641 aa16.5■□□□□ 0.23
TVP23B-208ENST00000575261 CPS1P31327 1500 aa16.5■□□□□ 0.23
TVP23B-208ENST00000575261 CROCC2H7BZ55 1655 aa16.5■□□□□ 0.23
TVP23B-208ENST00000575261 DEPDC5O75140 1603 aa16.49■□□□□ 0.23
TVP23B-208ENST00000575261 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
TVP23B-208ENST00000575261 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
TVP23B-208ENST00000575261 UBAP1LF5GYI3 381 aa16.48■□□□□ 0.23
TVP23B-208ENST00000575261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.48■□□□□ 0.23
TVP23B-208ENST00000575261 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
TVP23B-208ENST00000575261 CEP152O94986 1710 aa16.48■□□□□ 0.23
TVP23B-208ENST00000575261 THEMISQ8N1K5 641 aaPredicted RBP16.47■□□□□ 0.23
TVP23B-208ENST00000575261 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
TVP23B-208ENST00000575261 ANKLE2Q86XL3 938 aa16.46■□□□□ 0.23
TVP23B-208ENST00000575261 MED14O60244 1454 aa16.46■□□□□ 0.23
TVP23B-208ENST00000575261 PRDM15P57071 1507 aaPredicted RBP16.45■□□□□ 0.22
TVP23B-208ENST00000575261 VWDEQ8N2E2 1590 aa16.45■□□□□ 0.22
TVP23B-208ENST00000575261 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
TVP23B-208ENST00000575261 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
TVP23B-208ENST00000575261 NPHP4O75161 1426 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-208ENST00000575261 ERBINQ96RT1 1412 aa16.44■□□□□ 0.22
TVP23B-208ENST00000575261 APLP2Q06481 763 aa16.42■□□□□ 0.22
TVP23B-208ENST00000575261 ABCC5O15440 1437 aa16.42■□□□□ 0.22
TVP23B-208ENST00000575261 ILDR2Q71H61 639 aa16.41■□□□□ 0.22
TVP23B-208ENST00000575261 UBR1Q8IWV7 1749 aa16.41■□□□□ 0.22
TVP23B-208ENST00000575261 DAPK1P53355 1430 aa16.4■□□□□ 0.22
TVP23B-208ENST00000575261 ARHGAP31Q2M1Z3 1444 aa16.39■□□□□ 0.21
TVP23B-208ENST00000575261 FGD6Q6ZV73 1430 aa16.39■□□□□ 0.21
TVP23B-208ENST00000575261 SYNMO15061 1565 aa16.38■□□□□ 0.21
TVP23B-208ENST00000575261 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
TVP23B-208ENST00000575261 TOM1O60784 492 aa16.37■□□□□ 0.21
TVP23B-208ENST00000575261 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
TVP23B-208ENST00000575261 SCAF11Q99590 1463 aaKnown RBP16.36■□□□□ 0.21
TVP23B-208ENST00000575261 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
TVP23B-208ENST00000575261 SOCS7O14512 581 aa16.35■□□□□ 0.21
TVP23B-208ENST00000575261 KANK1Q14678 1352 aa16.35■□□□□ 0.21
TVP23B-208ENST00000575261 SLIT1O75093 1534 aa16.35■□□□□ 0.21
TVP23B-208ENST00000575261 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
TVP23B-208ENST00000575261 ARHGAP23Q9P227 1491 aa16.34■□□□□ 0.21
TVP23B-208ENST00000575261 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
TVP23B-208ENST00000575261 ANKRD30AQ9BXX3 1397 aa16.33■□□□□ 0.2
TVP23B-208ENST00000575261 LMTK2Q8IWU2 1503 aa16.33■□□□□ 0.2
TVP23B-208ENST00000575261 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
TVP23B-208ENST00000575261 KDM5AP29375 1690 aaKnown RBP16.31■□□□□ 0.2
TVP23B-208ENST00000575261 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
TVP23B-208ENST00000575261 LRRC7Q96NW7 1537 aa16.31■□□□□ 0.2
TVP23B-208ENST00000575261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.31■□□□□ 0.2
TVP23B-208ENST00000575261 HSPA1LP34931 641 aa16.3■□□□□ 0.2
TVP23B-208ENST00000575261 MED1Q15648 1581 aaPredicted RBP16.3■□□□□ 0.2
TVP23B-208ENST00000575261 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
TVP23B-208ENST00000575261 ADGRL2O95490 1459 aa16.29■□□□□ 0.2
TVP23B-208ENST00000575261 LTKP29376 864 aa16.27■□□□□ 0.2
TVP23B-208ENST00000575261 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
TVP23B-208ENST00000575261 EID1Q9Y6B2 187 aa16.27■□□□□ 0.2
TVP23B-208ENST00000575261 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
TVP23B-208ENST00000575261 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
TVP23B-208ENST00000575261 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
TVP23B-208ENST00000575261 ADGRB3O60242 1522 aa16.24■□□□□ 0.19
TVP23B-208ENST00000575261 NOS1P29475 1434 aa16.24■□□□□ 0.19
TVP23B-208ENST00000575261 RPRD2Q5VT52 1461 aaKnown RBP16.22■□□□□ 0.19
TVP23B-208ENST00000575261 ANKRD50Q9ULJ7 1429 aa16.22■□□□□ 0.19
TVP23B-208ENST00000575261 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
TVP23B-208ENST00000575261 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
TVP23B-208ENST00000575261 IDI1Q13907 227 aa16.2■□□□□ 0.18
TVP23B-208ENST00000575261 TET3O43151 1660 aa16.2■□□□□ 0.18
TVP23B-208ENST00000575261 UNC13BO14795 1591 aa16.18■□□□□ 0.18
TVP23B-208ENST00000575261 GCC2Q8IWJ2 1684 aa16.18■□□□□ 0.18
TVP23B-208ENST00000575261 SLC52A1Q9NWF4 448 aa16.17■□□□□ 0.18
TVP23B-208ENST00000575261 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
TVP23B-208ENST00000575261 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
TVP23B-208ENST00000575261 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
TVP23B-208ENST00000575261 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
TVP23B-208ENST00000575261 TMEM94Q12767 1356 aa16.13■□□□□ 0.17
TVP23B-208ENST00000575261 MYO5BQ9ULV0 1848 aa16.13■□□□□ 0.17
TVP23B-208ENST00000575261 ZFYVE9O95405 1425 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms