RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 PSDA5PKW4 1024 aaPredicted RBP9□□□□□ -0.97
PRPF8-211ENST00000574728 MAP3K7O43318 606 aa9□□□□□ -0.97
PRPF8-211ENST00000574728 ZMYND10O75800 440 aa9□□□□□ -0.97
PRPF8-211ENST00000574728 PRIM1P49642 420 aaKnown RBP9□□□□□ -0.97
PRPF8-211ENST00000574728 BAZ1AQ9NRL2 1556 aaPredicted RBP8.99□□□□□ -0.97
PRPF8-211ENST00000574728 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
PRPF8-211ENST00000574728 ZDHHC16Q969W1 377 aa8.99□□□□□ -0.97
PRPF8-211ENST00000574728 RBM33Q96EV2 1170 aaKnown RBP8.99□□□□□ -0.97
PRPF8-211ENST00000574728 LHX6Q9UPM6 363 aa8.99□□□□□ -0.97
PRPF8-211ENST00000574728 PEG3Q9GZU2 1588 aa8.99□□□□□ -0.97
PRPF8-211ENST00000574728 FCHSD2O94868 740 aa8.98□□□□□ -0.97
PRPF8-211ENST00000574728 GPR37O15354 613 aa8.97□□□□□ -0.97
PRPF8-211ENST00000574728 PPP4R3BQ5MIZ7 849 aa8.97□□□□□ -0.97
PRPF8-211ENST00000574728 HIC1Q14526 733 aa8.96□□□□□ -0.98
PRPF8-211ENST00000574728 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
PRPF8-211ENST00000574728 HMGXB3Q12766 1538 aa8.95□□□□□ -0.98
PRPF8-211ENST00000574728 SMARCA2P51531 1590 aa8.95□□□□□ -0.98
PRPF8-211ENST00000574728 GNPATO15228 680 aa8.94□□□□□ -0.98
PRPF8-211ENST00000574728 PTGDRQ13258 359 aa8.94□□□□□ -0.98
PRPF8-211ENST00000574728 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
PRPF8-211ENST00000574728 SLC24A3Q9HC58 644 aa8.94□□□□□ -0.98
PRPF8-211ENST00000574728 TSR1Q2NL82 804 aaKnown RBP8.93□□□□□ -0.98
PRPF8-211ENST00000574728 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
PRPF8-211ENST00000574728 ADAM33Q9BZ11 813 aa8.93□□□□□ -0.98
PRPF8-211ENST00000574728 ST18O60284 1047 aa8.92□□□□□ -0.98
PRPF8-211ENST00000574728 CERKQ8TCT0 537 aa8.92□□□□□ -0.98
PRPF8-211ENST00000574728 BCL2L12Q9HB09 334 aa8.91□□□□□ -0.98
PRPF8-211ENST00000574728 RSF1Q96T23 1441 aaPredicted RBP8.9□□□□□ -0.98
PRPF8-211ENST00000574728 ERBB3P21860 1342 aa8.9□□□□□ -0.98
PRPF8-211ENST00000574728 MINK1Q8N4C8 1332 aaPredicted RBP8.9□□□□□ -0.98
PRPF8-211ENST00000574728 MAP2K5Q13163 448 aa8.9□□□□□ -0.98
PRPF8-211ENST00000574728 AK7Q96M32 723 aa8.9□□□□□ -0.98
PRPF8-211ENST00000574728 NPDC1Q9NQX5 325 aaPredicted RBP8.9□□□□□ -0.98
PRPF8-211ENST00000574728 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
PRPF8-211ENST00000574728 EMP3P54852 163 aa8.89□□□□□ -0.99
PRPF8-211ENST00000574728 FAM163AQ96GL9 167 aaPredicted RBP8.89□□□□□ -0.99
PRPF8-211ENST00000574728 PTPREP23469 700 aa8.88□□□□□ -0.99
PRPF8-211ENST00000574728 FECHP22830 423 aa8.87□□□□□ -0.99
PRPF8-211ENST00000574728 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
PRPF8-211ENST00000574728 IRF6O14896 467 aa8.86□□□□□ -0.99
PRPF8-211ENST00000574728 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
PRPF8-211ENST00000574728 MARVELD3Q96A59 401 aa8.86□□□□□ -0.99
PRPF8-211ENST00000574728 RBM27Q9P2N5 1060 aaKnown RBP8.86□□□□□ -0.99
PRPF8-211ENST00000574728 WIZO95785 1651 aa8.85□□□□□ -0.99
PRPF8-211ENST00000574728 PPP1R3GB7ZBB8 358 aa8.85□□□□□ -0.99
PRPF8-211ENST00000574728 CCDC102AQ96A19 550 aa8.84□□□□□ -0.99
PRPF8-211ENST00000574728 FAM205CA6NFA0 338 aa8.83□□□□□ -1
PRPF8-211ENST00000574728 TRIM66O15016 1216 aa8.83□□□□□ -1
PRPF8-211ENST00000574728 PADI6Q6TGC4 694 aa8.83□□□□□ -1
PRPF8-211ENST00000574728 COL9A1P20849 921 aa8.82□□□□□ -1
PRPF8-211ENST00000574728 PRSS12P56730 875 aa8.82□□□□□ -1
PRPF8-211ENST00000574728 CDCA7LQ96GN5 454 aa8.82□□□□□ -1
PRPF8-211ENST00000574728 KCNK17Q96T54 332 aa8.82□□□□□ -1
PRPF8-211ENST00000574728 NESP48681 1621 aa8.82□□□□□ -1
PRPF8-211ENST00000574728 BRPF1P55201 1214 aaPredicted RBP8.81□□□□□ -1
PRPF8-211ENST00000574728 NEUROD2Q15784 382 aa8.81□□□□□ -1
PRPF8-211ENST00000574728 TTC13Q8NBP0 860 aa8.8□□□□□ -1
PRPF8-211ENST00000574728 ARHGAP33O14559 1287 aa8.79□□□□□ -1
PRPF8-211ENST00000574728 PBX2P40425 430 aa8.79□□□□□ -1
PRPF8-211ENST00000574728 PDE4DQ08499 809 aa8.79□□□□□ -1
PRPF8-211ENST00000574728 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
PRPF8-211ENST00000574728 OATP04181 439 aa8.78□□□□□ -1
PRPF8-211ENST00000574728 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
PRPF8-211ENST00000574728 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
PRPF8-211ENST00000574728 TOP2AP11388 1531 aaKnown RBP8.78□□□□□ -1
PRPF8-211ENST00000574728 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
PRPF8-211ENST00000574728 PSEN2P49810 448 aa8.77□□□□□ -1.01
PRPF8-211ENST00000574728 AMHR2Q16671 573 aa8.77□□□□□ -1.01
PRPF8-211ENST00000574728 ADGRG1Q9Y653 693 aa8.77□□□□□ -1.01
PRPF8-211ENST00000574728 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
PRPF8-211ENST00000574728 RBM46Q8TBY0 533 aaKnown RBP8.76□□□□□ -1.01
PRPF8-211ENST00000574728 CADPSQ9ULU8 1353 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 NBPF26B4DH59 902 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 FAM161AQ3B820 660 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 POTEEQ6S8J3 1075 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 TSKSQ9UJT2 592 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 AXIN2Q9Y2T1 843 aa8.75□□□□□ -1.01
PRPF8-211ENST00000574728 PROX2Q3B8N5 592 aa8.74□□□□□ -1.01
PRPF8-211ENST00000574728 METTL3Q86U44 580 aaKnown RBP8.74□□□□□ -1.01
PRPF8-211ENST00000574728 PXYLP1Q8TE99 480 aa8.74□□□□□ -1.01
PRPF8-211ENST00000574728 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
PRPF8-211ENST00000574728 LAMC3Q9Y6N6 1575 aa8.73□□□□□ -1.01
PRPF8-211ENST00000574728 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
PRPF8-211ENST00000574728 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
PRPF8-211ENST00000574728 POTEBQ6S5H4 581 aa8.73□□□□□ -1.01
PRPF8-211ENST00000574728 SLC4A5Q9BY07 1137 aa8.73□□□□□ -1.01
PRPF8-211ENST00000574728 GPBP1L1Q9HC44 474 aaPredicted RBP8.73□□□□□ -1.01
PRPF8-211ENST00000574728 DMRTA1Q5VZB9 504 aa8.72□□□□□ -1.01
PRPF8-211ENST00000574728 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
PRPF8-211ENST00000574728 PNMA3Q9UL41 463 aa8.72□□□□□ -1.01
PRPF8-211ENST00000574728 CFTRP13569 1480 aa8.71□□□□□ -1.01
PRPF8-211ENST00000574728 CLCN1P35523 988 aa8.71□□□□□ -1.02
PRPF8-211ENST00000574728 NUDT18Q6ZVK8 323 aa8.71□□□□□ -1.02
PRPF8-211ENST00000574728 PARP9Q8IXQ6 854 aa8.71□□□□□ -1.02
PRPF8-211ENST00000574728 TATDN2Q93075 761 aa8.71□□□□□ -1.02
PRPF8-211ENST00000574728 MDM2Q00987 491 aaPredicted RBP8.7□□□□□ -1.02
PRPF8-211ENST00000574728 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
PRPF8-211ENST00000574728 KIAA1468Q9P260 1216 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms