RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 ROCK1Q13464 1354 aa13.76□□□□□ -0.21
CHRNB1-205ENST00000573209 ADGBQ8N7X0 1667 aa13.76□□□□□ -0.21
CHRNB1-205ENST00000573209 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
CHRNB1-205ENST00000573209 KIAA0556O60303 1618 aa13.74□□□□□ -0.21
CHRNB1-205ENST00000573209 ITSN2Q9NZM3 1697 aa13.74□□□□□ -0.21
CHRNB1-205ENST00000573209 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
CHRNB1-205ENST00000573209 IRX6P78412 446 aaPredicted RBP13.73□□□□□ -0.21
CHRNB1-205ENST00000573209 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
CHRNB1-205ENST00000573209 RPRD2Q5VT52 1461 aaKnown RBP13.73□□□□□ -0.21
CHRNB1-205ENST00000573209 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 NCOA1Q15788 1441 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 EIF4G2P78344 907 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 MAP7D2Q96T17 732 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 DAPK1P53355 1430 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 TEX14Q8IWB6 1497 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 RRP7BPQ9NSQ0 103 aa13.72□□□□□ -0.21
CHRNB1-205ENST00000573209 CROCC2H7BZ55 1655 aa13.71□□□□□ -0.21
CHRNB1-205ENST00000573209 UTP14CQ5TAP6 766 aaKnown RBP13.71□□□□□ -0.21
CHRNB1-205ENST00000573209 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
CHRNB1-205ENST00000573209 L1TD1Q5T7N2 865 aaKnown RBP13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 B4GALNT3Q6L9W6 998 aa13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 ADCY10Q96PN6 1610 aa13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 TMEM51Q9NW97 253 aa13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
CHRNB1-205ENST00000573209 HNRNPUQ00839 825 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHRNB1-205ENST00000573209 ZNF830Q96NB3 372 aaPredicted RBP13.68□□□□□ -0.22
CHRNB1-205ENST00000573209 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
CHRNB1-205ENST00000573209 ANKRD30BQ9BXX2 1392 aa13.67□□□□□ -0.22
CHRNB1-205ENST00000573209 KIAA0586Q9BVV6 1533 aa13.67□□□□□ -0.22
CHRNB1-205ENST00000573209 CDK11BP21127 795 aaKnown RBP13.67□□□□□ -0.22
CHRNB1-205ENST00000573209 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
CHRNB1-205ENST00000573209 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
CHRNB1-205ENST00000573209 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
CHRNB1-205ENST00000573209 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
CHRNB1-205ENST00000573209 ABCC5O15440 1437 aa13.66□□□□□ -0.22
CHRNB1-205ENST00000573209 NUP153P49790 1475 aaKnown RBP13.65□□□□□ -0.22
CHRNB1-205ENST00000573209 KIF14Q15058 1648 aa13.65□□□□□ -0.22
CHRNB1-205ENST00000573209 FOXD1Q16676 465 aa13.65□□□□□ -0.22
CHRNB1-205ENST00000573209 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
CHRNB1-205ENST00000573209 L3MBTL2Q969R5 705 aa13.64□□□□□ -0.23
CHRNB1-205ENST00000573209 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
CHRNB1-205ENST00000573209 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
CHRNB1-205ENST00000573209 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
CHRNB1-205ENST00000573209 ADGRL2O95490 1459 aa13.62□□□□□ -0.23
CHRNB1-205ENST00000573209 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
CHRNB1-205ENST00000573209 ZHX1Q9UKY1 873 aaPredicted RBP13.61□□□□□ -0.23
CHRNB1-205ENST00000573209 CHD1O14646 1710 aa13.61□□□□□ -0.23
CHRNB1-205ENST00000573209 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
CHRNB1-205ENST00000573209 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
CHRNB1-205ENST00000573209 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 DMTNQ08495 405 aa13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 PZPP20742 1482 aa13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
CHRNB1-205ENST00000573209 CNPY4Q8N129 248 aa13.59□□□□□ -0.23
CHRNB1-205ENST00000573209 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
CHRNB1-205ENST00000573209 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
CHRNB1-205ENST00000573209 IRX3P78415 501 aaPredicted RBP13.58□□□□□ -0.24
CHRNB1-205ENST00000573209 KDM5CP41229 1560 aa13.57□□□□□ -0.24
CHRNB1-205ENST00000573209 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
CHRNB1-205ENST00000573209 MTERF4Q7Z6M4 381 aaKnown RBP13.57□□□□□ -0.24
CHRNB1-205ENST00000573209 KIF20AO95235 890 aa13.56□□□□□ -0.24
CHRNB1-205ENST00000573209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHRNB1-205ENST00000573209 BCORL1Q5H9F3 1711 aa13.56□□□□□ -0.24
CHRNB1-205ENST00000573209 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
CHRNB1-205ENST00000573209 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
CHRNB1-205ENST00000573209 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
CHRNB1-205ENST00000573209 NBPF8Q3BBV2 869 aa13.55□□□□□ -0.24
CHRNB1-205ENST00000573209 VGLL3A8MV65 326 aa13.54□□□□□ -0.24
CHRNB1-205ENST00000573209 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
CHRNB1-205ENST00000573209 MRS2Q9HD23 443 aa13.54□□□□□ -0.24
CHRNB1-205ENST00000573209 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
CHRNB1-205ENST00000573209 ARHGEF12Q9NZN5 1544 aa13.53□□□□□ -0.24
CHRNB1-205ENST00000573209 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
CHRNB1-205ENST00000573209 KDM5DQ9BY66 1539 aa13.53□□□□□ -0.24
CHRNB1-205ENST00000573209 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
CHRNB1-205ENST00000573209 TERF1P54274 439 aa13.51□□□□□ -0.25
CHRNB1-205ENST00000573209 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
CHRNB1-205ENST00000573209 RALGAPBQ86X10 1494 aa13.51□□□□□ -0.25
CHRNB1-205ENST00000573209 CLGNO14967 610 aa13.51□□□□□ -0.25
CHRNB1-205ENST00000573209 WWC1Q8IX03 1113 aa13.51□□□□□ -0.25
CHRNB1-205ENST00000573209 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
CHRNB1-205ENST00000573209 E9PCH4 1651 aa13.5□□□□□ -0.25
CHRNB1-205ENST00000573209 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
CHRNB1-205ENST00000573209 TCERG1O14776 1098 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-205ENST00000573209 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-205ENST00000573209 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 TMEM132AQ24JP5 1023 aa13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 NUP160Q12769 1436 aa13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 MMP14P50281 582 aa13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 KCNG1Q9UIX4 513 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms